RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 ENO3P13929 434 aaPredicted RBP14.93□□□□□ -0.02
TNFRSF1B-201ENST00000376259 AMPD1P23109 780 aa14.93□□□□□ -0.02
TNFRSF1B-201ENST00000376259 GPX6P59796 221 aa14.93□□□□□ -0.02
TNFRSF1B-201ENST00000376259 MCL1Q07820 350 aa14.93□□□□□ -0.02
TNFRSF1B-201ENST00000376259 DCAF6Q58WW2 860 aa14.93□□□□□ -0.02
TNFRSF1B-201ENST00000376259 TAS1R3Q7RTX0 852 aa14.93□□□□□ -0.02
TNFRSF1B-201ENST00000376259 IGDCC3Q8IVU1 814 aa14.93□□□□□ -0.02
TNFRSF1B-201ENST00000376259 RYBPQ8N488 228 aaPredicted RBP14.93□□□□□ -0.02
TNFRSF1B-201ENST00000376259 PGLYRP2Q96PD5 576 aa14.93□□□□□ -0.02
TNFRSF1B-201ENST00000376259 NMRK1Q9NWW6 199 aa14.93□□□□□ -0.02
TNFRSF1B-201ENST00000376259 COMMD10Q9Y6G5 202 aa14.93□□□□□ -0.02
TNFRSF1B-201ENST00000376259 AK5Q9Y6K8 562 aa14.93□□□□□ -0.02
TNFRSF1B-201ENST00000376259 DOCK2Q92608 1830 aa14.93□□□□□ -0.02
TNFRSF1B-201ENST00000376259 ANKRD36CQ5JPF3 1778 aa14.93□□□□□ -0.02
TNFRSF1B-201ENST00000376259 SPDYE5A6NIY4 337 aa14.93□□□□□ -0.02
TNFRSF1B-201ENST00000376259 STAG3L1P0CL83 205 aa14.93□□□□□ -0.02
TNFRSF1B-201ENST00000376259 KCNA2P16389 499 aa14.93□□□□□ -0.02
TNFRSF1B-201ENST00000376259 SERPINB5P36952 375 aa14.93□□□□□ -0.02
TNFRSF1B-201ENST00000376259 GRIA1P42261 906 aa14.93□□□□□ -0.02
TNFRSF1B-201ENST00000376259 POU5F1BQ06416 359 aa14.93□□□□□ -0.02
TNFRSF1B-201ENST00000376259 ITKQ08881 620 aa14.93□□□□□ -0.02
TNFRSF1B-201ENST00000376259 SEPT6Q14141 434 aa14.93□□□□□ -0.02
TNFRSF1B-201ENST00000376259 RHBDF2Q6PJF5 856 aa14.93□□□□□ -0.02
TNFRSF1B-201ENST00000376259 SLC26A11Q86WA9 606 aa14.93□□□□□ -0.02
TNFRSF1B-201ENST00000376259 PHF13Q86YI8 300 aaPredicted RBP14.93□□□□□ -0.02
TNFRSF1B-201ENST00000376259 CADM1Q9BY67 442 aaKnown RBP14.93□□□□□ -0.02
TNFRSF1B-201ENST00000376259 LRRC4Q9HBW1 653 aa14.93□□□□□ -0.02
TNFRSF1B-201ENST00000376259 ARHGAP28Q9P2N2 729 aa14.93□□□□□ -0.02
TNFRSF1B-201ENST00000376259 ASS1P00966 412 aaKnown RBP14.93□□□□□ -0.02
TNFRSF1B-201ENST00000376259 ERBB2P04626 1255 aa14.93□□□□□ -0.02
TNFRSF1B-201ENST00000376259 CYP1A1P04798 512 aaPredicted RBP14.93□□□□□ -0.02
TNFRSF1B-201ENST00000376259 TPH1P17752 444 aa14.93□□□□□ -0.02
TNFRSF1B-201ENST00000376259 AVPR1AP37288 418 aa14.93□□□□□ -0.02
TNFRSF1B-201ENST00000376259 TGFB2P61812 414 aa14.93□□□□□ -0.02
TNFRSF1B-201ENST00000376259 AP2B1P63010 937 aa14.93□□□□□ -0.02
TNFRSF1B-201ENST00000376259 KIZQ2M2Z5 673 aa14.93□□□□□ -0.02
TNFRSF1B-201ENST00000376259 TTC39BQ5VTQ0 682 aaPredicted RBP14.93□□□□□ -0.02
TNFRSF1B-201ENST00000376259 TRMT10BQ6PF06 316 aaKnown RBP14.93□□□□□ -0.02
TNFRSF1B-201ENST00000376259 BRSK2Q8IWQ3 736 aa14.93□□□□□ -0.02
TNFRSF1B-201ENST00000376259 SCUBE1Q8IWY4 988 aa14.93□□□□□ -0.02
TNFRSF1B-201ENST00000376259 PPWD1Q96BP3 646 aaKnown RBP14.93□□□□□ -0.02
TNFRSF1B-201ENST00000376259 FOXP3Q9BZS1 431 aa14.93□□□□□ -0.02
TNFRSF1B-201ENST00000376259 VCX3BQ9H321 246 aa14.93□□□□□ -0.02
TNFRSF1B-201ENST00000376259 RABGEF1Q9UJ41 708 aa14.93□□□□□ -0.02
TNFRSF1B-201ENST00000376259 DDX60Q8IY21 1712 aaKnown RBP14.92□□□□□ -0.02
TNFRSF1B-201ENST00000376259 WDR27A2RRH5 827 aa14.92□□□□□ -0.02
TNFRSF1B-201ENST00000376259 LACTBL1A8MY62 500 aa14.92□□□□□ -0.02
TNFRSF1B-201ENST00000376259 AP1G2O75843 785 aa14.92□□□□□ -0.02
TNFRSF1B-201ENST00000376259 MTA2O94776 668 aa14.92□□□□□ -0.02
TNFRSF1B-201ENST00000376259 EFNA5P52803 228 aa14.92□□□□□ -0.02
TNFRSF1B-201ENST00000376259 ITGA9Q13797 1035 aa14.92□□□□□ -0.02
TNFRSF1B-201ENST00000376259 MAP7D1Q3KQU3 841 aa14.92□□□□□ -0.02
TNFRSF1B-201ENST00000376259 JADE1Q6IE81 842 aa14.92□□□□□ -0.02
TNFRSF1B-201ENST00000376259 RWDD4Q6NW29 188 aaKnown RBP14.92□□□□□ -0.02
TNFRSF1B-201ENST00000376259 LRRC74BQ6ZQY2 392 aa14.92□□□□□ -0.02
TNFRSF1B-201ENST00000376259 RINLQ6ZS11 566 aa14.92□□□□□ -0.02
TNFRSF1B-201ENST00000376259 TNS4Q8IZW8 715 aa14.92□□□□□ -0.02
TNFRSF1B-201ENST00000376259 GSDMBQ8TAX9 411 aa14.92□□□□□ -0.02
TNFRSF1B-201ENST00000376259 SNX25Q9H3E2 840 aa14.92□□□□□ -0.02
TNFRSF1B-201ENST00000376259 PRR5-ARHGAP8B1AHC4 643 aa14.92□□□□□ -0.02
TNFRSF1B-201ENST00000376259 CACNA2D1P54289 1103 aa14.92□□□□□ -0.02
TNFRSF1B-201ENST00000376259 ARHGAP8P85298 464 aa14.92□□□□□ -0.02
TNFRSF1B-201ENST00000376259 TMEM132DQ14C87 1099 aa14.92□□□□□ -0.02
TNFRSF1B-201ENST00000376259 CCDC14Q49A88 953 aa14.92□□□□□ -0.02
TNFRSF1B-201ENST00000376259 VWA5B1Q5TIE3 1220 aa14.92□□□□□ -0.02
TNFRSF1B-201ENST00000376259 LAYNQ6UX15 382 aa14.92□□□□□ -0.02
TNFRSF1B-201ENST00000376259 WDR60Q8WVS4 1066 aa14.92□□□□□ -0.02
TNFRSF1B-201ENST00000376259 COG7P83436 770 aa14.91□□□□□ -0.02
TNFRSF1B-201ENST00000376259 MMEL1Q495T6 779 aa14.91□□□□□ -0.02
TNFRSF1B-201ENST00000376259 ZNF669Q96BR6 464 aaPredicted RBP14.91□□□□□ -0.02
TNFRSF1B-201ENST00000376259 ALKBH8Q96BT7 664 aaKnown RBP14.91□□□□□ -0.02
TNFRSF1B-201ENST00000376259 FAM136AQ96C01 138 aa14.91□□□□□ -0.02
TNFRSF1B-201ENST00000376259 TWNKQ96RR1 684 aa14.91□□□□□ -0.02
TNFRSF1B-201ENST00000376259 MAGEB5Q9BZ81 275 aa14.91□□□□□ -0.02
TNFRSF1B-201ENST00000376259 ACSS3Q9H6R3 686 aa14.91□□□□□ -0.02
TNFRSF1B-201ENST00000376259 ANLNQ9NQW6 1124 aa14.91□□□□□ -0.02
TNFRSF1B-201ENST00000376259 PAK5Q9P286 719 aa14.91□□□□□ -0.02
TNFRSF1B-201ENST00000376259 RPS6KL1Q9Y6S9 549 aa14.91□□□□□ -0.02
TNFRSF1B-201ENST00000376259 NAV1Q8NEY1 1877 aa14.91□□□□□ -0.02
TNFRSF1B-201ENST00000376259 COL14A1Q05707 1796 aaKnown RBP14.91□□□□□ -0.02
TNFRSF1B-201ENST00000376259 NDC80O14777 642 aa14.91□□□□□ -0.02
TNFRSF1B-201ENST00000376259 PEX11AO75192 247 aa14.91□□□□□ -0.02
TNFRSF1B-201ENST00000376259 LMNAP02545 664 aaKnown RBP14.91□□□□□ -0.02
TNFRSF1B-201ENST00000376259 TPBGLP0DKB5 382 aa14.91□□□□□ -0.02
TNFRSF1B-201ENST00000376259 ATP4AP20648 1035 aa14.91□□□□□ -0.02
TNFRSF1B-201ENST00000376259 CDK16Q00536 496 aa14.91□□□□□ -0.02
TNFRSF1B-201ENST00000376259 SLC45A4Q5BKX6 768 aa14.91□□□□□ -0.02
TNFRSF1B-201ENST00000376259 ACSBG2Q5FVE4 666 aa14.91□□□□□ -0.02
TNFRSF1B-201ENST00000376259 TRIM42Q8IWZ5 723 aa14.91□□□□□ -0.02
TNFRSF1B-201ENST00000376259 TMEM176AQ96HP8 235 aa14.91□□□□□ -0.02
TNFRSF1B-201ENST00000376259 NT5C1AQ9BXI3 368 aa14.91□□□□□ -0.02
TNFRSF1B-201ENST00000376259 RNPEPQ9H4A4 650 aa14.91□□□□□ -0.02
TNFRSF1B-201ENST00000376259 CLUHO75153 1309 aa14.91□□□□□ -0.02
TNFRSF1B-201ENST00000376259 PROCP04070 461 aa14.91□□□□□ -0.02
TNFRSF1B-201ENST00000376259 KLRC2P26717 231 aa14.91□□□□□ -0.02
TNFRSF1B-201ENST00000376259 RABGGTBP53611 331 aa14.91□□□□□ -0.02
TNFRSF1B-201ENST00000376259 TAP1Q03518 808 aa14.91□□□□□ -0.02
TNFRSF1B-201ENST00000376259 FASTKD1Q53R41 847 aaKnown RBP14.91□□□□□ -0.02
TNFRSF1B-201ENST00000376259 N4BP2L1Q5TBK1 243 aaPredicted RBP14.91□□□□□ -0.02
TNFRSF1B-201ENST00000376259 WDR49Q8IV35 697 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms