RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 FAM155BO75949 473 aa11.55□□□□□ -0.56
CCDC40-203ENST00000374877 DSG1Q02413 1049 aa11.55□□□□□ -0.56
CCDC40-203ENST00000374877 SCARA3Q6AZY7 606 aa11.55□□□□□ -0.56
CCDC40-203ENST00000374877 SAPCD2Q86UD0 394 aa11.55□□□□□ -0.56
CCDC40-203ENST00000374877 OR5B17Q8NGF7 314 aa11.55□□□□□ -0.56
CCDC40-203ENST00000374877 CFAP36Q96G28 342 aa11.55□□□□□ -0.56
CCDC40-203ENST00000374877 SRPK1Q96SB4 655 aaKnown RBP11.55□□□□□ -0.56
CCDC40-203ENST00000374877 MPHOSPH6Q99547 160 aaKnown RBP11.55□□□□□ -0.56
CCDC40-203ENST00000374877 PHACTR1Q9C0D0 580 aa11.55□□□□□ -0.56
CCDC40-203ENST00000374877 POLR3FQ9H1D9 316 aaPredicted RBP11.55□□□□□ -0.56
CCDC40-203ENST00000374877 ZNF395Q9H8N7 513 aaPredicted RBP11.55□□□□□ -0.56
CCDC40-203ENST00000374877 STRIP2Q9ULQ0 834 aa11.55□□□□□ -0.56
CCDC40-203ENST00000374877 TLL2Q9Y6L7 1015 aa11.55□□□□□ -0.56
CCDC40-203ENST00000374877 SPECC1L-ADORA2AF8WAN1 911 aa11.55□□□□□ -0.56
CCDC40-203ENST00000374877 ZNF862O60290 1169 aa11.55□□□□□ -0.56
CCDC40-203ENST00000374877 EDNRBP24530 442 aa11.55□□□□□ -0.56
CCDC40-203ENST00000374877 TBXAS1P24557 533 aaPredicted RBP11.55□□□□□ -0.56
CCDC40-203ENST00000374877 ALDH18A1P54886 795 aaKnown RBP11.55□□□□□ -0.56
CCDC40-203ENST00000374877 CUL3Q13618 768 aa11.55□□□□□ -0.56
CCDC40-203ENST00000374877 CDHR3Q6ZTQ4 885 aa11.55□□□□□ -0.56
CCDC40-203ENST00000374877 PPM1NQ8N819 430 aa11.55□□□□□ -0.56
CCDC40-203ENST00000374877 HHIPL1Q96JK4 782 aa11.55□□□□□ -0.56
CCDC40-203ENST00000374877 RILPQ96NA2 401 aa11.55□□□□□ -0.56
CCDC40-203ENST00000374877 IMPG2Q9BZV3 1241 aa11.55□□□□□ -0.56
CCDC40-203ENST00000374877 SLC13A1Q9BZW2 595 aa11.55□□□□□ -0.56
CCDC40-203ENST00000374877 SLC9A2Q9UBY0 812 aa11.55□□□□□ -0.56
CCDC40-203ENST00000374877 PCDHA10Q9Y5I2 948 aa11.55□□□□□ -0.56
CCDC40-203ENST00000374877 TRIM49D1C9J1S8 452 aa11.54□□□□□ -0.56
CCDC40-203ENST00000374877 E7ESA3 106 aa11.54□□□□□ -0.56
CCDC40-203ENST00000374877 SLC10A3P09131 477 aa11.54□□□□□ -0.56
CCDC40-203ENST00000374877 GSTT1P30711 240 aa11.54□□□□□ -0.56
CCDC40-203ENST00000374877 RAP1GDS1P52306 607 aa11.54□□□□□ -0.56
CCDC40-203ENST00000374877 AP2B1P63010 937 aa11.54□□□□□ -0.56
CCDC40-203ENST00000374877 NCOA4Q13772 614 aa11.54□□□□□ -0.56
CCDC40-203ENST00000374877 GSTA3Q16772 222 aa11.54□□□□□ -0.56
CCDC40-203ENST00000374877 CFAP157Q5JU67 520 aa11.54□□□□□ -0.56
CCDC40-203ENST00000374877 PPP1R2P3Q6NXS1 205 aa11.54□□□□□ -0.56
CCDC40-203ENST00000374877 PRPF39Q86UA1 669 aaKnown RBP11.54□□□□□ -0.56
CCDC40-203ENST00000374877 RFX6Q8HWS3 928 aa11.54□□□□□ -0.56
CCDC40-203ENST00000374877 ULK2Q8IYT8 1036 aa11.54□□□□□ -0.56
CCDC40-203ENST00000374877 TMEM35BQ8NCS4 154 aa11.54□□□□□ -0.56
CCDC40-203ENST00000374877 RDM1Q8NG50 284 aa11.54□□□□□ -0.56
CCDC40-203ENST00000374877 PANX3Q96QZ0 392 aa11.54□□□□□ -0.56
CCDC40-203ENST00000374877 TUBGCP5Q96RT8 1024 aa11.54□□□□□ -0.56
CCDC40-203ENST00000374877 GORASP1Q9BQQ3 440 aa11.54□□□□□ -0.56
CCDC40-203ENST00000374877 C17orf75Q9HAS0 396 aa11.54□□□□□ -0.56
CCDC40-203ENST00000374877 PCSK1NQ9UHG2 260 aa11.54□□□□□ -0.56
CCDC40-203ENST00000374877 DNAJC25-GNG10A0A024R161 153 aa11.54□□□□□ -0.56
CCDC40-203ENST00000374877 MAGEC1O60732 1142 aa11.54□□□□□ -0.56
CCDC40-203ENST00000374877 RNF8O76064 485 aa11.54□□□□□ -0.56
CCDC40-203ENST00000374877 CD48P09326 243 aa11.54□□□□□ -0.56
CCDC40-203ENST00000374877 CYP2C8P10632 490 aa11.54□□□□□ -0.56
CCDC40-203ENST00000374877 ICAM3P32942 547 aa11.54□□□□□ -0.56
CCDC40-203ENST00000374877 ZNF157P51786 506 aaPredicted RBP11.54□□□□□ -0.56
CCDC40-203ENST00000374877 EIF3EP60228 445 aaKnown RBP11.54□□□□□ -0.56
CCDC40-203ENST00000374877 BST1Q10588 318 aa11.54□□□□□ -0.56
CCDC40-203ENST00000374877 LAMB3Q13751 1172 aa11.54□□□□□ -0.56
CCDC40-203ENST00000374877 LRRC36Q1X8D7 754 aa11.54□□□□□ -0.56
CCDC40-203ENST00000374877 Q3C1V9 767 aa11.54□□□□□ -0.56
CCDC40-203ENST00000374877 SWSAP1Q6NVH7 229 aa11.54□□□□□ -0.56
CCDC40-203ENST00000374877 SLC44A1Q8WWI5 657 aa11.54□□□□□ -0.56
CCDC40-203ENST00000374877 MTBPQ96DY7 904 aa11.54□□□□□ -0.56
CCDC40-203ENST00000374877 XPNPEP1Q9NQW7 623 aa11.54□□□□□ -0.56
CCDC40-203ENST00000374877 AVILO75366 819 aa11.53□□□□□ -0.56
CCDC40-203ENST00000374877 PTPN7P35236 360 aa11.53□□□□□ -0.56
CCDC40-203ENST00000374877 KCTD2Q14681 263 aa11.53□□□□□ -0.56
CCDC40-203ENST00000374877 STXBP2Q15833 593 aa11.53□□□□□ -0.56
CCDC40-203ENST00000374877 TRMT5Q32P41 509 aaKnown RBP11.53□□□□□ -0.56
CCDC40-203ENST00000374877 MTERF2Q49AM1 385 aa11.53□□□□□ -0.56
CCDC40-203ENST00000374877 TTC13Q8NBP0 860 aa11.53□□□□□ -0.56
CCDC40-203ENST00000374877 MCPH1Q8NEM0 835 aa11.53□□□□□ -0.56
CCDC40-203ENST00000374877 MMP19Q99542 508 aa11.53□□□□□ -0.56
CCDC40-203ENST00000374877 ECSITQ9BQ95 431 aa11.53□□□□□ -0.56
CCDC40-203ENST00000374877 MSTO1Q9BUK6 570 aa11.53□□□□□ -0.56
CCDC40-203ENST00000374877 PCMTD2Q9NV79 361 aa11.53□□□□□ -0.56
CCDC40-203ENST00000374877 SLC7A8Q9UHI5 535 aa11.53□□□□□ -0.56
CCDC40-203ENST00000374877 KCNG1Q9UIX4 513 aa11.53□□□□□ -0.56
CCDC40-203ENST00000374877 MEI4A8MW99 385 aa11.53□□□□□ -0.56
CCDC40-203ENST00000374877 WEE2P0C1S8 567 aa11.53□□□□□ -0.56
CCDC40-203ENST00000374877 RBP3P10745 1247 aa11.53□□□□□ -0.56
CCDC40-203ENST00000374877 IL1R2P27930 398 aa11.53□□□□□ -0.56
CCDC40-203ENST00000374877 RFC1P35251 1148 aaPredicted RBP11.53□□□□□ -0.56
CCDC40-203ENST00000374877 AQP5P55064 265 aa11.53□□□□□ -0.56
CCDC40-203ENST00000374877 CLDN10P78369 228 aa11.53□□□□□ -0.56
CCDC40-203ENST00000374877 SLC18A2Q05940 514 aa11.53□□□□□ -0.56
CCDC40-203ENST00000374877 CHI3L2Q15782 390 aa11.53□□□□□ -0.56
CCDC40-203ENST00000374877 NET1Q7Z628 596 aaPredicted RBP11.53□□□□□ -0.56
CCDC40-203ENST00000374877 NR1H4Q96RI1 486 aaPredicted RBP11.53□□□□□ -0.56
CCDC40-203ENST00000374877 CALN1Q9BXU9 219 aa11.53□□□□□ -0.56
CCDC40-203ENST00000374877 FAM192AQ9GZU8 254 aa11.53□□□□□ -0.56
CCDC40-203ENST00000374877 WWP1Q9H0M0 922 aa11.53□□□□□ -0.56
CCDC40-203ENST00000374877 KCNK4Q9NYG8 393 aa11.53□□□□□ -0.56
CCDC40-203ENST00000374877 ARHGAP28Q9P2N2 729 aa11.53□□□□□ -0.56
CCDC40-203ENST00000374877 PPM1HQ9ULR3 514 aa11.53□□□□□ -0.56
CCDC40-203ENST00000374877 ARHGAP42A6NI28 874 aa11.53□□□□□ -0.56
CCDC40-203ENST00000374877 LRRIQ4A6NIV6 560 aa11.53□□□□□ -0.56
CCDC40-203ENST00000374877 F8W8V4 182 aa11.53□□□□□ -0.56
CCDC40-203ENST00000374877 CYB561D2O14569 222 aa11.53□□□□□ -0.56
CCDC40-203ENST00000374877 MCF2LO15068 1137 aa11.53□□□□□ -0.56
CCDC40-203ENST00000374877 DGAT1O75907 488 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms