RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 CTNNA2P26232 953 aa18.04■□□□□ 0.48
HLA-DMA-201ENST00000374843 YWHAZP63104 245 aaKnown RBP18.04■□□□□ 0.48
HLA-DMA-201ENST00000374843 PLD1Q13393 1074 aa18.04■□□□□ 0.48
HLA-DMA-201ENST00000374843 SDHAF4Q5VUM1 108 aa18.04■□□□□ 0.48
HLA-DMA-201ENST00000374843 RTL10Q7L3V2 364 aa18.04■□□□□ 0.48
HLA-DMA-201ENST00000374843 BNIPLQ7Z465 357 aa18.04■□□□□ 0.48
HLA-DMA-201ENST00000374843 RXFP2Q8WXD0 754 aa18.04■□□□□ 0.48
HLA-DMA-201ENST00000374843 NT5C3BQ969T7 300 aa18.04■□□□□ 0.48
HLA-DMA-201ENST00000374843 DDX23Q9BUQ8 820 aaKnown RBP18.04■□□□□ 0.48
HLA-DMA-201ENST00000374843 CYP4F11Q9HBI6 524 aa18.04■□□□□ 0.48
HLA-DMA-201ENST00000374843 POPDC2Q9HBU9 364 aa18.04■□□□□ 0.48
HLA-DMA-201ENST00000374843 INSL5Q9Y5Q6 135 aa18.04■□□□□ 0.48
HLA-DMA-201ENST00000374843 GREB1Q4ZG55 1949 aa18.04■□□□□ 0.48
HLA-DMA-201ENST00000374843 MYO16Q9Y6X6 1858 aa18.03■□□□□ 0.48
HLA-DMA-201ENST00000374843 SLC38A8A6NNN8 435 aa18.03■□□□□ 0.48
HLA-DMA-201ENST00000374843 SPOPO43791 374 aa18.03■□□□□ 0.48
HLA-DMA-201ENST00000374843 GRAP2O75791 330 aa18.03■□□□□ 0.48
HLA-DMA-201ENST00000374843 GLUD1P00367 558 aa18.03■□□□□ 0.48
HLA-DMA-201ENST00000374843 FYNP06241 537 aa18.03■□□□□ 0.48
HLA-DMA-201ENST00000374843 PDGFRAP16234 1089 aa18.03■□□□□ 0.48
HLA-DMA-201ENST00000374843 PRLRP16471 622 aa18.03■□□□□ 0.48
HLA-DMA-201ENST00000374843 SDC4P31431 198 aa18.03■□□□□ 0.48
HLA-DMA-201ENST00000374843 CTNNA1P35221 906 aaKnown RBP18.03■□□□□ 0.48
HLA-DMA-201ENST00000374843 IRS1P35568 1242 aa18.03■□□□□ 0.48
HLA-DMA-201ENST00000374843 MATKP42679 507 aa18.03■□□□□ 0.48
HLA-DMA-201ENST00000374843 USP46P62068 366 aa18.03■□□□□ 0.48
HLA-DMA-201ENST00000374843 CCDC14Q49A88 953 aa18.03■□□□□ 0.48
HLA-DMA-201ENST00000374843 HFE2Q6ZVN8 426 aa18.03■□□□□ 0.48
HLA-DMA-201ENST00000374843 CPNE8Q86YQ8 564 aa18.03■□□□□ 0.48
HLA-DMA-201ENST00000374843 ARHGAP18Q8N392 663 aa18.03■□□□□ 0.48
HLA-DMA-201ENST00000374843 NDRG1Q92597 394 aaKnown RBP18.03■□□□□ 0.48
HLA-DMA-201ENST00000374843 CENPIQ92674 756 aaPredicted RBP18.03■□□□□ 0.48
HLA-DMA-201ENST00000374843 FAM149B1Q96BN6 582 aa18.03■□□□□ 0.48
HLA-DMA-201ENST00000374843 TRMT2BQ96GJ1 504 aaKnown RBP18.03■□□□□ 0.48
HLA-DMA-201ENST00000374843 NCAPGQ9BPX3 1015 aa18.03■□□□□ 0.48
HLA-DMA-201ENST00000374843 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.03■□□□□ 0.48
HLA-DMA-201ENST00000374843 EHD2Q9NZN4 543 aa18.03■□□□□ 0.48
HLA-DMA-201ENST00000374843 SNX12Q9UMY4 172 aa18.03■□□□□ 0.48
HLA-DMA-201ENST00000374843 ATG2AQ2TAZ0 1938 aa18.03■□□□□ 0.48
HLA-DMA-201ENST00000374843 PRRG1O14668 218 aa18.02■□□□□ 0.48
HLA-DMA-201ENST00000374843 ENC1O14682 589 aa18.02■□□□□ 0.48
HLA-DMA-201ENST00000374843 TRANK1O15050 2925 aa18.02■□□□□ 0.48
HLA-DMA-201ENST00000374843 DDX3YO15523 660 aaKnown RBP18.02■□□□□ 0.48
HLA-DMA-201ENST00000374843 PSTPIP1O43586 416 aa18.02■□□□□ 0.48
HLA-DMA-201ENST00000374843 NCK2O43639 380 aa18.02■□□□□ 0.48
HLA-DMA-201ENST00000374843 LPXNO60711 386 aa18.02■□□□□ 0.48
HLA-DMA-201ENST00000374843 ZDHHC11BP0C7U3 371 aa18.02■□□□□ 0.48
HLA-DMA-201ENST00000374843 ELF1P32519 619 aa18.02■□□□□ 0.48
HLA-DMA-201ENST00000374843 NOS2P35228 1153 aa18.02■□□□□ 0.48
HLA-DMA-201ENST00000374843 PCK1P35558 622 aa18.02■□□□□ 0.48
HLA-DMA-201ENST00000374843 CLCN4P51793 760 aa18.02■□□□□ 0.48
HLA-DMA-201ENST00000374843 RPS6KA1Q15418 735 aa18.02■□□□□ 0.48
HLA-DMA-201ENST00000374843 LRRC38Q5VT99 294 aa18.02■□□□□ 0.48
HLA-DMA-201ENST00000374843 OTUD1Q5VV17 481 aaPredicted RBP18.02■□□□□ 0.48
HLA-DMA-201ENST00000374843 CCDC149Q6ZUS6 474 aa18.02■□□□□ 0.48
HLA-DMA-201ENST00000374843 SCD5Q86SK9 330 aa18.02■□□□□ 0.48
HLA-DMA-201ENST00000374843 MON1AQ86VX9 555 aa18.02■□□□□ 0.48
HLA-DMA-201ENST00000374843 DEFB106AQ8N104 65 aa18.02■□□□□ 0.48
HLA-DMA-201ENST00000374843 ARFGAP1Q8N6T3 406 aa18.02■□□□□ 0.48
HLA-DMA-201ENST00000374843 OVCA2Q8WZ82 227 aa18.02■□□□□ 0.48
HLA-DMA-201ENST00000374843 TIFAQ96CG3 184 aa18.02■□□□□ 0.48
HLA-DMA-201ENST00000374843 MYRFLQ96LU7 910 aa18.02■□□□□ 0.48
HLA-DMA-201ENST00000374843 NPY6RQ99463 290 aa18.02■□□□□ 0.48
HLA-DMA-201ENST00000374843 SLC28A3Q9HAS3 691 aa18.02■□□□□ 0.48
HLA-DMA-201ENST00000374843 RRN3Q9NYV6 651 aa18.02■□□□□ 0.48
HLA-DMA-201ENST00000374843 HYOU1Q9Y4L1 999 aa18.02■□□□□ 0.48
HLA-DMA-201ENST00000374843 A0A1W2PPC1 479 aa18.01■□□□□ 0.47
HLA-DMA-201ENST00000374843 CCDC66A2RUB6 948 aa18.01■□□□□ 0.47
HLA-DMA-201ENST00000374843 CES2O00748 559 aa18.01■□□□□ 0.47
HLA-DMA-201ENST00000374843 LRCH4O75427 683 aa18.01■□□□□ 0.47
HLA-DMA-201ENST00000374843 CSH1P0DML2 217 aa18.01■□□□□ 0.47
HLA-DMA-201ENST00000374843 CSH2P0DML3 217 aa18.01■□□□□ 0.47
HLA-DMA-201ENST00000374843 HMGA1P17096 107 aaKnown RBP18.01■□□□□ 0.47
HLA-DMA-201ENST00000374843 TCP1P17987 556 aaKnown RBP18.01■□□□□ 0.47
HLA-DMA-201ENST00000374843 KLRC2P26717 231 aa18.01■□□□□ 0.47
HLA-DMA-201ENST00000374843 YWHAQP27348 245 aa18.01■□□□□ 0.47
HLA-DMA-201ENST00000374843 CA8P35219 290 aa18.01■□□□□ 0.47
HLA-DMA-201ENST00000374843 ALDH1A3P47895 512 aa18.01■□□□□ 0.47
HLA-DMA-201ENST00000374843 RNASE9P60153 205 aaKnown RBP18.01■□□□□ 0.47
HLA-DMA-201ENST00000374843 YWHAGP61981 247 aaKnown RBP eCLIP18.01■□□□□ 0.47
HLA-DMA-201ENST00000374843 SLC25A11Q02978 314 aaKnown RBP18.01■□□□□ 0.47
HLA-DMA-201ENST00000374843 VEPH1Q14D04 833 aa18.01■□□□□ 0.47
HLA-DMA-201ENST00000374843 SLC25A52Q3SY17 297 aa18.01■□□□□ 0.47
HLA-DMA-201ENST00000374843 DNTTIP2Q5QJE6 756 aaKnown RBP18.01■□□□□ 0.47
HLA-DMA-201ENST00000374843 BSPRYQ5W0U4 402 aa18.01■□□□□ 0.47
HLA-DMA-201ENST00000374843 STRADAQ7RTN6 431 aa18.01■□□□□ 0.47
HLA-DMA-201ENST00000374843 POLNQ7Z5Q5 900 aa18.01■□□□□ 0.47
HLA-DMA-201ENST00000374843 STKLD1Q8NE28 680 aa18.01■□□□□ 0.47
HLA-DMA-201ENST00000374843 ZNF592Q92610 1267 aa18.01■□□□□ 0.47
HLA-DMA-201ENST00000374843 GOLGA1Q92805 767 aa18.01■□□□□ 0.47
HLA-DMA-201ENST00000374843 CFAP57Q96MR6 1250 aa18.01■□□□□ 0.47
HLA-DMA-201ENST00000374843 STAP1Q9ULZ2 295 aa18.01■□□□□ 0.47
HLA-DMA-201ENST00000374843 PACSIN2Q9UNF0 486 aaPredicted RBP18.01■□□□□ 0.47
HLA-DMA-201ENST00000374843 PCDHA3Q9Y5H8 950 aa18.01■□□□□ 0.47
HLA-DMA-201ENST00000374843 EPOPA6NHQ4 379 aa18■□□□□ 0.47
HLA-DMA-201ENST00000374843 CLASP2O75122 1294 aaKnown RBP18■□□□□ 0.47
HLA-DMA-201ENST00000374843 ENDOD1O94919 500 aa18■□□□□ 0.47
HLA-DMA-201ENST00000374843 IGLV3-25P01717 112 aa18■□□□□ 0.47
HLA-DMA-201ENST00000374843 DESP17661 470 aa18■□□□□ 0.47
HLA-DMA-201ENST00000374843 PSEN1P49768 467 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms