RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 NAP1L5Q96NT1 182 aaPredicted RBP22.08■■□□□ 1.13
MAP1LC3A-202ENST00000374837 ARHGEF3Q9NR81 526 aa22.08■■□□□ 1.13
MAP1LC3A-202ENST00000374837 THG1LQ9NWX6 298 aaKnown RBP22.08■■□□□ 1.13
MAP1LC3A-202ENST00000374837 CPQQ9Y646 472 aa22.08■■□□□ 1.13
MAP1LC3A-202ENST00000374837 TECTAO75443 2155 aa22.07■■□□□ 1.12
MAP1LC3A-202ENST00000374837 ARNTLO00327 626 aa22.07■■□□□ 1.12
MAP1LC3A-202ENST00000374837 TLR5O60602 858 aa22.07■■□□□ 1.12
MAP1LC3A-202ENST00000374837 ZBED1O96006 694 aa22.07■■□□□ 1.12
MAP1LC3A-202ENST00000374837 MBL2P11226 248 aaPredicted RBP22.07■■□□□ 1.12
MAP1LC3A-202ENST00000374837 LCP1P13796 627 aa22.07■■□□□ 1.12
MAP1LC3A-202ENST00000374837 TCF3P15923 654 aa22.07■■□□□ 1.12
MAP1LC3A-202ENST00000374837 ADIGQ0VDE8 80 aa22.07■■□□□ 1.12
MAP1LC3A-202ENST00000374837 ZNF77Q15935 545 aa22.07■■□□□ 1.12
MAP1LC3A-202ENST00000374837 MEA1Q16626 185 aa22.07■■□□□ 1.12
MAP1LC3A-202ENST00000374837 TTC16Q8NEE8 873 aa22.07■■□□□ 1.12
MAP1LC3A-202ENST00000374837 DNASE1L2Q92874 299 aa22.07■■□□□ 1.12
MAP1LC3A-202ENST00000374837 HSFY1Q96LI6 401 aa22.07■■□□□ 1.12
MAP1LC3A-202ENST00000374837 TRPV5Q9NQA5 729 aa22.07■■□□□ 1.12
MAP1LC3A-202ENST00000374837 CYLDQ9NQC7 956 aa22.07■■□□□ 1.12
MAP1LC3A-202ENST00000374837 GKN1Q9NS71 199 aa22.07■■□□□ 1.12
MAP1LC3A-202ENST00000374837 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.07■■□□□ 1.12
MAP1LC3A-202ENST00000374837 SMPD4Q9NXE4 827 aa22.07■■□□□ 1.12
MAP1LC3A-202ENST00000374837 NAGPAQ9UK23 515 aa22.07■■□□□ 1.12
MAP1LC3A-202ENST00000374837 F8VZ95 297 aa22.06■■□□□ 1.12
MAP1LC3A-202ENST00000374837 LEFTY2O00292 366 aa22.06■■□□□ 1.12
MAP1LC3A-202ENST00000374837 TBX18O95935 607 aa22.06■■□□□ 1.12
MAP1LC3A-202ENST00000374837 RARGP13631 454 aa22.06■■□□□ 1.12
MAP1LC3A-202ENST00000374837 PSEN1P49768 467 aa22.06■■□□□ 1.12
MAP1LC3A-202ENST00000374837 BPIFB4P59827 614 aa22.06■■□□□ 1.12
MAP1LC3A-202ENST00000374837 TPM4P67936 248 aa22.06■■□□□ 1.12
MAP1LC3A-202ENST00000374837 USP4Q13107 963 aa22.06■■□□□ 1.12
MAP1LC3A-202ENST00000374837 FILIP1LQ4L180 1135 aa22.06■■□□□ 1.12
MAP1LC3A-202ENST00000374837 LRSAM1Q6UWE0 723 aa22.06■■□□□ 1.12
MAP1LC3A-202ENST00000374837 NEK11Q8NG66 645 aa22.06■■□□□ 1.12
MAP1LC3A-202ENST00000374837 FAM83CQ9BQN1 747 aa22.06■■□□□ 1.12
MAP1LC3A-202ENST00000374837 NLRC4Q9NPP4 1024 aa22.06■■□□□ 1.12
MAP1LC3A-202ENST00000374837 HEBP1Q9NRV9 189 aa22.06■■□□□ 1.12
MAP1LC3A-202ENST00000374837 DAAM1Q9Y4D1 1078 aa22.06■■□□□ 1.12
MAP1LC3A-202ENST00000374837 TRIOO75962 3097 aa22.05■■□□□ 1.12
MAP1LC3A-202ENST00000374837 A0A1B0GTH6 734 aa22.05■■□□□ 1.12
MAP1LC3A-202ENST00000374837 PIK3R2O00459 728 aa22.05■■□□□ 1.12
MAP1LC3A-202ENST00000374837 RPL34P49207 117 aaKnown RBP22.05■■□□□ 1.12
MAP1LC3A-202ENST00000374837 JAM2P57087 298 aa22.05■■□□□ 1.12
MAP1LC3A-202ENST00000374837 PLCB2Q00722 1185 aa22.05■■□□□ 1.12
MAP1LC3A-202ENST00000374837 MTF1Q14872 753 aa22.05■■□□□ 1.12
MAP1LC3A-202ENST00000374837 MLF2Q15773 248 aaPredicted RBP22.05■■□□□ 1.12
MAP1LC3A-202ENST00000374837 CC2D1AQ6P1N0 951 aaPredicted RBP22.05■■□□□ 1.12
MAP1LC3A-202ENST00000374837 BHLHA9Q7RTU4 235 aa22.05■■□□□ 1.12
MAP1LC3A-202ENST00000374837 SIX6OS1Q8N1H7 587 aa22.05■■□□□ 1.12
MAP1LC3A-202ENST00000374837 ARHGAP18Q8N392 663 aa22.05■■□□□ 1.12
MAP1LC3A-202ENST00000374837 ZNF276Q8N554 614 aa22.05■■□□□ 1.12
MAP1LC3A-202ENST00000374837 ZFRQ96KR1 1074 aaKnown RBP22.05■■□□□ 1.12
MAP1LC3A-202ENST00000374837 MFSD1Q9H3U5 465 aa22.05■■□□□ 1.12
MAP1LC3A-202ENST00000374837 TSPY26PQ9H489 355 aa22.05■■□□□ 1.12
MAP1LC3A-202ENST00000374837 CLIC5Q9NZA1 410 aa22.05■■□□□ 1.12
MAP1LC3A-202ENST00000374837 CYTH4Q9UIA0 394 aa22.05■■□□□ 1.12
MAP1LC3A-202ENST00000374837 NUDT5Q9UKK9 219 aa22.05■■□□□ 1.12
MAP1LC3A-202ENST00000374837 PCDHGC3Q9UN70 934 aa22.05■■□□□ 1.12
MAP1LC3A-202ENST00000374837 GOLGA6L19H0YKK7 550 aa22.04■■□□□ 1.12
MAP1LC3A-202ENST00000374837 SERPINC1P01008 464 aa22.04■■□□□ 1.12
MAP1LC3A-202ENST00000374837 RALAP11233 206 aa22.04■■□□□ 1.12
MAP1LC3A-202ENST00000374837 CYP11B1P15538 503 aa22.04■■□□□ 1.12
MAP1LC3A-202ENST00000374837 ATP5C1P36542 298 aaKnown RBP22.04■■□□□ 1.12
MAP1LC3A-202ENST00000374837 YWHAGP61981 247 aaKnown RBP eCLIP22.04■■□□□ 1.12
MAP1LC3A-202ENST00000374837 FANCCQ00597 558 aa22.04■■□□□ 1.12
MAP1LC3A-202ENST00000374837 PRKCQQ04759 706 aa22.04■■□□□ 1.12
MAP1LC3A-202ENST00000374837 TNK2Q07912 1038 aa22.04■■□□□ 1.12
MAP1LC3A-202ENST00000374837 NR1I3Q14994 352 aa22.04■■□□□ 1.12
MAP1LC3A-202ENST00000374837 SCML4Q8N228 414 aa22.04■■□□□ 1.12
MAP1LC3A-202ENST00000374837 FBXL6Q8N531 539 aa22.04■■□□□ 1.12
MAP1LC3A-202ENST00000374837 WDTC1Q8N5D0 677 aa22.04■■□□□ 1.12
MAP1LC3A-202ENST00000374837 CSGALNACT1Q8TDX6 532 aa22.04■■□□□ 1.12
MAP1LC3A-202ENST00000374837 STK32AQ8WU08 396 aa22.04■■□□□ 1.12
MAP1LC3A-202ENST00000374837 NACA2Q9H009 215 aa22.04■■□□□ 1.12
MAP1LC3A-202ENST00000374837 CNGB3Q9NQW8 809 aa22.04■■□□□ 1.12
MAP1LC3A-202ENST00000374837 CFAP97Q9P2B7 532 aa22.04■■□□□ 1.12
MAP1LC3A-202ENST00000374837 MDM4O15151 490 aa22.03■■□□□ 1.12
MAP1LC3A-202ENST00000374837 KRT9P35527 623 aa22.03■■□□□ 1.12
MAP1LC3A-202ENST00000374837 SOX5P35711 763 aa22.03■■□□□ 1.12
MAP1LC3A-202ENST00000374837 STARD6P59095 220 aa22.03■■□□□ 1.12
MAP1LC3A-202ENST00000374837 DAOAP59103 153 aa22.03■■□□□ 1.12
MAP1LC3A-202ENST00000374837 C10orf120Q5SQS8 335 aa22.03■■□□□ 1.12
MAP1LC3A-202ENST00000374837 TRIM68Q6AZZ1 485 aa22.03■■□□□ 1.12
MAP1LC3A-202ENST00000374837 KLHDC10Q6PID8 442 aa22.03■■□□□ 1.12
MAP1LC3A-202ENST00000374837 FLCNQ8NFG4 579 aa22.03■■□□□ 1.12
MAP1LC3A-202ENST00000374837 TTC8Q8TAM2 541 aa22.03■■□□□ 1.12
MAP1LC3A-202ENST00000374837 OSCP1Q8WVF1 389 aa22.03■■□□□ 1.12
MAP1LC3A-202ENST00000374837 SHDQ96IW2 340 aa22.03■■□□□ 1.12
MAP1LC3A-202ENST00000374837 KLF16Q9BXK1 252 aaPredicted RBP22.03■■□□□ 1.12
MAP1LC3A-202ENST00000374837 SLC4A5Q9BY07 1137 aa22.03■■□□□ 1.12
MAP1LC3A-202ENST00000374837 LHX5Q9H2C1 402 aa22.03■■□□□ 1.12
MAP1LC3A-202ENST00000374837 LINC00597Q9H2U6 94 aa22.03■■□□□ 1.12
MAP1LC3A-202ENST00000374837 TBC1D17Q9HA65 648 aa22.03■■□□□ 1.12
MAP1LC3A-202ENST00000374837 HPS4Q9NQG7 708 aa22.03■■□□□ 1.12
MAP1LC3A-202ENST00000374837 ST7Q9NRC1 585 aa22.03■■□□□ 1.12
MAP1LC3A-202ENST00000374837 DUS2Q9NX74 493 aaKnown RBP22.03■■□□□ 1.12
MAP1LC3A-202ENST00000374837 GTSE1Q9NYZ3 720 aa22.03■■□□□ 1.12
MAP1LC3A-202ENST00000374837 YJEFN3A6XGL0 299 aa22.02■■□□□ 1.12
MAP1LC3A-202ENST00000374837 E7ENQ6 273 aa22.02■■□□□ 1.12
MAP1LC3A-202ENST00000374837 GFPT2O94808 682 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms