RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 RGS4P49798 205 aa12.7□□□□□ -0.38
NPLOC4-202ENST00000374747 LRRC6Q86X45 466 aa12.7□□□□□ -0.38
NPLOC4-202ENST00000374747 ANKRD27Q96NW4 1050 aa12.7□□□□□ -0.38
NPLOC4-202ENST00000374747 MTMR9Q96QG7 549 aa12.7□□□□□ -0.38
NPLOC4-202ENST00000374747 ECSITQ9BQ95 431 aa12.7□□□□□ -0.38
NPLOC4-202ENST00000374747 PIK3CDO00329 1044 aa12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 TPST1O60507 370 aa12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 BRD2P25440 801 aaKnown RBP12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 CACNB2Q08289 660 aaPredicted RBP12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 NAPEPLDQ6IQ20 393 aa12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 VPS37AQ8NEZ2 397 aa12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 FOPNLQ96NB1 174 aa12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 EFCAB1Q9HAE3 211 aa12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 ADGRA3Q8IWK6 1321 aa12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 MANSC4A6NHS7 340 aaPredicted RBP12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 PSTPIP1O43586 416 aa12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 TAL1P17542 331 aaPredicted RBP12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 PTGER2P43116 358 aa12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 KCNMA1Q12791 1236 aa12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 SMTNL2Q2TAL5 461 aa12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 PAPD7Q5XG87 772 aaKnown RBP12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 RNF180Q86T96 592 aa12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 PABPC5Q96DU9 382 aaKnown RBP12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 USE1Q9NZ43 259 aa12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 PCDHAC2Q9Y5I4 1007 aa12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 FAM237AA0A1B0GTK4 181 aa12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 SLITRK3O94933 977 aa12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 STIP1P31948 543 aaKnown RBP12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 PPIL2Q13356 520 aa12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 FAM83EQ2M2I3 478 aa12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 CD302Q8IX05 232 aa12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 FRMD8P1Q9BZ68 369 aaPredicted RBP12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 THAP2Q9H0W7 228 aa12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 NAGPAQ9UK23 515 aa12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 RNF103O00237 685 aa12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 ALDH5A1P51649 535 aaPredicted RBP12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 VGLL4Q14135 290 aa12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 SV2CQ496J9 727 aa12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 GPAT2Q6NUI2 795 aa12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 BNC2Q6ZN30 1099 aaPredicted RBP12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 TMC2Q8TDI7 906 aa12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 DIS3LQ8TF46 1054 aaKnown RBP12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 TADA1Q96BN2 335 aa12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 FAR2Q96K12 515 aa12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 NT5C1AQ9BXI3 368 aa12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 WHRNQ9P202 907 aa12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 ROBO3Q96MS0 1386 aa12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 DPYSL4O14531 572 aa12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 CLPTM1O96005 669 aa12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 RPLP2P05387 115 aaKnown RBP12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 PLEKP08567 350 aaPredicted RBP12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 GRIK1P39086 918 aa12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 ACADSBP45954 432 aa12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 PSMC6P62333 389 aa12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 TP53BP2Q13625 1128 aa12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 CATSPERGQ6ZRH7 1159 aa12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 HDDC2Q7Z4H3 204 aa12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 SLC51AQ86UW1 340 aa12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 SPATA2LQ8IUW3 424 aaPredicted RBP12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 BTN2A2Q8WVV5 523 aa12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 KLHL4Q9C0H6 718 aa12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 IMPAD1Q9NX62 359 aa12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 SOX13Q9UN79 622 aa12.69□□□□□ -0.38
NPLOC4-202ENST00000374747 FKBP6O75344 327 aa12.68□□□□□ -0.38
NPLOC4-202ENST00000374747 RARRES1P49788 294 aa12.68□□□□□ -0.38
NPLOC4-202ENST00000374747 TBL3Q12788 808 aaKnown RBP12.68□□□□□ -0.38
NPLOC4-202ENST00000374747 VEPH1Q14D04 833 aa12.68□□□□□ -0.38
NPLOC4-202ENST00000374747 JADE3Q92613 823 aa12.68□□□□□ -0.38
NPLOC4-202ENST00000374747 DCDC2Q9UHG0 476 aa12.68□□□□□ -0.38
NPLOC4-202ENST00000374747 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.68□□□□□ -0.38
NPLOC4-202ENST00000374747 ZC3H11AO75152 810 aaKnown RBP eCLIP12.68□□□□□ -0.38
NPLOC4-202ENST00000374747 GRAP2O75791 330 aa12.68□□□□□ -0.38
NPLOC4-202ENST00000374747 ATP6V1G2O95670 118 aa12.68□□□□□ -0.38
NPLOC4-202ENST00000374747 ZNF23P17027 643 aa12.68□□□□□ -0.38
NPLOC4-202ENST00000374747 PCSK7Q16549 785 aa12.68□□□□□ -0.38
NPLOC4-202ENST00000374747 IPMKQ8NFU5 416 aa12.68□□□□□ -0.38
NPLOC4-202ENST00000374747 ATP8B4Q8TF62 1192 aa12.68□□□□□ -0.38
NPLOC4-202ENST00000374747 GLT1D1Q96MS3 346 aa12.68□□□□□ -0.38
NPLOC4-202ENST00000374747 FAM153AQ9UHL3 310 aa12.68□□□□□ -0.38
NPLOC4-202ENST00000374747 RNF225M0QZC1 329 aaPredicted RBP12.68□□□□□ -0.38
NPLOC4-202ENST00000374747 PON1P27169 355 aa12.68□□□□□ -0.38
NPLOC4-202ENST00000374747 PNPLA4P41247 253 aa12.68□□□□□ -0.38
NPLOC4-202ENST00000374747 ACAD10Q6JQN1 1059 aa12.68□□□□□ -0.38
NPLOC4-202ENST00000374747 MPZL3Q6UWV2 235 aa12.68□□□□□ -0.38
NPLOC4-202ENST00000374747 PIK3R5Q8WYR1 880 aa12.68□□□□□ -0.38
NPLOC4-202ENST00000374747 HES6Q96HZ4 224 aa12.68□□□□□ -0.38
NPLOC4-202ENST00000374747 KLHL25Q9H0H3 589 aa12.68□□□□□ -0.38
NPLOC4-202ENST00000374747 SNX13Q9Y5W8 968 aa12.68□□□□□ -0.38
NPLOC4-202ENST00000374747 KANSL1LA0AUZ9 987 aa12.68□□□□□ -0.38
NPLOC4-202ENST00000374747 ALDH1A1P00352 501 aa12.68□□□□□ -0.38
NPLOC4-202ENST00000374747 GHRP10912 638 aa12.68□□□□□ -0.38
NPLOC4-202ENST00000374747 AKT1P31749 480 aa12.68□□□□□ -0.38
NPLOC4-202ENST00000374747 SOX6P35712 828 aa12.68□□□□□ -0.38
NPLOC4-202ENST00000374747 FDFT1P37268 417 aa12.68□□□□□ -0.38
NPLOC4-202ENST00000374747 WASHC5Q12768 1159 aa12.68□□□□□ -0.38
NPLOC4-202ENST00000374747 OASLQ15646 514 aaKnown RBP12.68□□□□□ -0.38
NPLOC4-202ENST00000374747 SNX31Q8N9S9 440 aa12.68□□□□□ -0.38
NPLOC4-202ENST00000374747 MRPS26Q9BYN8 205 aaKnown RBP12.68□□□□□ -0.38
NPLOC4-202ENST00000374747 VTA1Q9NP79 307 aa12.68□□□□□ -0.38
NPLOC4-202ENST00000374747 A1CFQ9NQ94 594 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms