RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 A8MXQ7 604 aa17.77■□□□□ 0.43
RXRB-201ENST00000374680 LPXNO60711 386 aa17.77■□□□□ 0.43
RXRB-201ENST00000374680 MCF2P10911 925 aa17.77■□□□□ 0.43
RXRB-201ENST00000374680 PDK4Q16654 411 aa17.77■□□□□ 0.43
RXRB-201ENST00000374680 TAPT1Q6NXT6 567 aa17.77■□□□□ 0.43
RXRB-201ENST00000374680 MTHFD1LQ6UB35 978 aa17.77■□□□□ 0.43
RXRB-201ENST00000374680 UNC5BQ8IZJ1 945 aa17.77■□□□□ 0.43
RXRB-201ENST00000374680 RIBC1Q8N443 379 aaPredicted RBP17.77■□□□□ 0.43
RXRB-201ENST00000374680 RNF157Q96PX1 679 aa17.77■□□□□ 0.43
RXRB-201ENST00000374680 SLC17A6Q9P2U8 582 aa17.77■□□□□ 0.43
RXRB-201ENST00000374680 MRPL42Q9Y6G3 142 aaKnown RBP17.77■□□□□ 0.43
RXRB-201ENST00000374680 H0Y3Z8 333 aa17.76■□□□□ 0.43
RXRB-201ENST00000374680 EDF1O60869 148 aaKnown RBP17.76■□□□□ 0.43
RXRB-201ENST00000374680 GABBR2O75899 941 aa17.76■□□□□ 0.43
RXRB-201ENST00000374680 BGNP21810 368 aa17.76■□□□□ 0.43
RXRB-201ENST00000374680 IL4RP24394 825 aa17.76■□□□□ 0.43
RXRB-201ENST00000374680 SDC4P31431 198 aa17.76■□□□□ 0.43
RXRB-201ENST00000374680 MAP2K2P36507 400 aa17.76■□□□□ 0.43
RXRB-201ENST00000374680 TAF1BQ53T94 588 aaPredicted RBP17.76■□□□□ 0.43
RXRB-201ENST00000374680 CEP128Q6ZU80 1094 aa17.76■□□□□ 0.43
RXRB-201ENST00000374680 DCAKDQ8WVC6 231 aa17.76■□□□□ 0.43
RXRB-201ENST00000374680 PRR11Q96HE9 360 aaPredicted RBP17.76■□□□□ 0.43
RXRB-201ENST00000374680 TRIM6Q9C030 488 aaPredicted RBP17.76■□□□□ 0.43
RXRB-201ENST00000374680 ACSS3Q9H6R3 686 aa17.76■□□□□ 0.43
RXRB-201ENST00000374680 PAPPA2Q9BXP8 1791 aa17.76■□□□□ 0.43
RXRB-201ENST00000374680 TRIP11Q15643 1979 aa17.76■□□□□ 0.43
RXRB-201ENST00000374680 SCN1AP35498 2009 aa17.76■□□□□ 0.43
RXRB-201ENST00000374680 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.76■□□□□ 0.43
RXRB-201ENST00000374680 CXCL11O14625 94 aa17.76■□□□□ 0.43
RXRB-201ENST00000374680 PAPSS1O43252 624 aaPredicted RBP17.76■□□□□ 0.43
RXRB-201ENST00000374680 KITP10721 976 aa17.76■□□□□ 0.43
RXRB-201ENST00000374680 IGFBP6P24592 240 aaPredicted RBP17.76■□□□□ 0.43
RXRB-201ENST00000374680 FAM149B1Q96BN6 582 aa17.76■□□□□ 0.43
RXRB-201ENST00000374680 SLC10A4Q96EP9 437 aa17.76■□□□□ 0.43
RXRB-201ENST00000374680 NXF3Q9H4D5 531 aaKnown RBP17.76■□□□□ 0.43
RXRB-201ENST00000374680 IL1RAPL1Q9NZN1 696 aa17.76■□□□□ 0.43
RXRB-201ENST00000374680 SMG5Q9UPR3 1016 aaKnown RBP17.76■□□□□ 0.43
RXRB-201ENST00000374680 CLEC11AQ9Y240 323 aa17.76■□□□□ 0.43
RXRB-201ENST00000374680 ACTL7BQ9Y614 415 aa17.76■□□□□ 0.43
RXRB-201ENST00000374680 EZRP15311 586 aaKnown RBP17.75■□□□□ 0.43
RXRB-201ENST00000374680 MOGSQ13724 837 aa17.75■□□□□ 0.43
RXRB-201ENST00000374680 GRIK4Q16099 956 aa17.75■□□□□ 0.43
RXRB-201ENST00000374680 MPP5Q8N3R9 675 aa17.75■□□□□ 0.43
RXRB-201ENST00000374680 FNIP1Q8TF40 1166 aa17.75■□□□□ 0.43
RXRB-201ENST00000374680 SGIP1Q9BQI5 828 aa17.75■□□□□ 0.43
RXRB-201ENST00000374680 MARCOQ9UEW3 520 aaPredicted RBP17.75■□□□□ 0.43
RXRB-201ENST00000374680 SLC24A2Q9UI40 661 aa17.75■□□□□ 0.43
RXRB-201ENST00000374680 CFAP69A5D8W1 941 aa17.75■□□□□ 0.43
RXRB-201ENST00000374680 TRIM49D1C9J1S8 452 aa17.75■□□□□ 0.43
RXRB-201ENST00000374680 ZNF200P98182 395 aaPredicted RBP17.75■□□□□ 0.43
RXRB-201ENST00000374680 TNFAIP2Q03169 654 aa17.75■□□□□ 0.43
RXRB-201ENST00000374680 NR1H3Q13133 447 aa17.75■□□□□ 0.43
RXRB-201ENST00000374680 NOMO1Q15155 1222 aa17.75■□□□□ 0.43
RXRB-201ENST00000374680 CASC4Q6P4E1 433 aa17.75■□□□□ 0.43
RXRB-201ENST00000374680 CDHR3Q6ZTQ4 885 aa17.75■□□□□ 0.43
RXRB-201ENST00000374680 FAM131BQ86XD5 332 aa17.75■□□□□ 0.43
RXRB-201ENST00000374680 EXOC8Q8IYI6 725 aa17.75■□□□□ 0.43
RXRB-201ENST00000374680 PQLC3Q8N755 202 aa17.75■□□□□ 0.43
RXRB-201ENST00000374680 CYTH2Q99418 400 aa17.75■□□□□ 0.43
RXRB-201ENST00000374680 ASB7Q9H672 318 aa17.75■□□□□ 0.43
RXRB-201ENST00000374680 FBXO6Q9NRD1 293 aaPredicted RBP17.75■□□□□ 0.43
RXRB-201ENST00000374680 HESX1Q9UBX0 185 aa17.75■□□□□ 0.43
RXRB-201ENST00000374680 GJD2Q9UKL4 321 aa17.75■□□□□ 0.43
RXRB-201ENST00000374680 CYB561D2O14569 222 aa17.75■□□□□ 0.43
RXRB-201ENST00000374680 PRPF4O43172 522 aaKnown RBP eCLIP17.75■□□□□ 0.432e-7■□□□□ 8.2
RXRB-201ENST00000374680 DYNC1LI2O43237 492 aaPredicted RBP17.75■□□□□ 0.43
RXRB-201ENST00000374680 PTPN7P35236 360 aa17.75■□□□□ 0.43
RXRB-201ENST00000374680 LAMC2Q13753 1193 aa17.75■□□□□ 0.43
RXRB-201ENST00000374680 MDH1BQ5I0G3 518 aa17.75■□□□□ 0.43
RXRB-201ENST00000374680 SWT1Q5T5J6 900 aaKnown RBP17.75■□□□□ 0.43
RXRB-201ENST00000374680 MROH9Q5TGP6 573 aa17.75■□□□□ 0.43
RXRB-201ENST00000374680 TRMT10BQ6PF06 316 aaKnown RBP17.75■□□□□ 0.43
RXRB-201ENST00000374680 ADGRD1Q6QNK2 874 aa17.75■□□□□ 0.43
RXRB-201ENST00000374680 RFX8Q6ZV50 586 aa17.75■□□□□ 0.43
RXRB-201ENST00000374680 C16orf70Q9BSU1 422 aa17.75■□□□□ 0.43
RXRB-201ENST00000374680 RNF39Q9H2S5 420 aa17.75■□□□□ 0.43
RXRB-201ENST00000374680 USP29Q9HBJ7 922 aa17.75■□□□□ 0.43
RXRB-201ENST00000374680 PCDH18Q9HCL0 1135 aa17.75■□□□□ 0.43
RXRB-201ENST00000374680 ETNK2Q9NVF9 386 aa17.75■□□□□ 0.43
RXRB-201ENST00000374680 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.75■□□□□ 0.43
RXRB-201ENST00000374680 SEPT10Q9P0V9 454 aa17.75■□□□□ 0.43
RXRB-201ENST00000374680 ZC3H7BQ9UGR2 993 aaKnown RBP17.75■□□□□ 0.43
RXRB-201ENST00000374680 USH1CQ9Y6N9 552 aa17.75■□□□□ 0.43
RXRB-201ENST00000374680 APOL1O14791 398 aa17.74■□□□□ 0.43
RXRB-201ENST00000374680 DIAPH2O60879 1101 aa17.74■□□□□ 0.43
RXRB-201ENST00000374680 METTL18O95568 372 aa17.74■□□□□ 0.43
RXRB-201ENST00000374680 ANP32DO95626 131 aa17.74■□□□□ 0.43
RXRB-201ENST00000374680 ATP2A2P16615 1042 aaKnown RBP17.74■□□□□ 0.43
RXRB-201ENST00000374680 AMPD1P23109 780 aa17.74■□□□□ 0.43
RXRB-201ENST00000374680 EPHB2P29323 1055 aa17.74■□□□□ 0.43
RXRB-201ENST00000374680 GMPRP36959 345 aa17.74■□□□□ 0.43
RXRB-201ENST00000374680 ZBTB16Q05516 673 aa17.74■□□□□ 0.43
RXRB-201ENST00000374680 ZNF484Q5JVG2 852 aa17.74■□□□□ 0.43
RXRB-201ENST00000374680 NLRP9Q7RTR0 991 aa17.74■□□□□ 0.43
RXRB-201ENST00000374680 TDRPQ86YL5 185 aa17.74■□□□□ 0.43
RXRB-201ENST00000374680 ASB14A6NK59 587 aa17.74■□□□□ 0.43
RXRB-201ENST00000374680 ACAT1P24752 427 aaKnown RBP17.74■□□□□ 0.43
RXRB-201ENST00000374680 SLC26A2P50443 739 aa17.74■□□□□ 0.43
RXRB-201ENST00000374680 SLC10A2Q12908 348 aaPredicted RBP17.74■□□□□ 0.43
RXRB-201ENST00000374680 LCLAT1Q6UWP7 414 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms