RNA–Protein interactions for RNA: ENST00000373583.5

HDAC8-208, Transcript of histone deacetylase 8, humanhuman

TSL 5 BASIC

Gene HDAC8, Length 434 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-208ENST00000373583 SMPD4Q9NXE4 827 aa16.82■□□□□ 0.28
HDAC8-208ENST00000373583 TSPAN16Q9UKR8 245 aa16.82■□□□□ 0.28
HDAC8-208ENST00000373583 E2F8A0AVK6 867 aa16.81■□□□□ 0.28
HDAC8-208ENST00000373583 XPO1O14980 1071 aaKnown RBP16.81■□□□□ 0.28
HDAC8-208ENST00000373583 SETSIPP0DME0 302 aa16.81■□□□□ 0.28
HDAC8-208ENST00000373583 GJA4P35212 333 aa16.81■□□□□ 0.28
HDAC8-208ENST00000373583 PGFP49763 221 aa16.81■□□□□ 0.28
HDAC8-208ENST00000373583 ZNF132P52740 706 aa16.81■□□□□ 0.28
HDAC8-208ENST00000373583 BST2Q10589 180 aaKnown RBP16.81■□□□□ 0.28
HDAC8-208ENST00000373583 SMYD5Q6GMV2 418 aa16.81■□□□□ 0.28
HDAC8-208ENST00000373583 TMEM270Q6UE05 265 aa16.81■□□□□ 0.28
HDAC8-208ENST00000373583 PIGZQ86VD9 579 aa16.81■□□□□ 0.28
HDAC8-208ENST00000373583 TTC16Q8NEE8 873 aa16.81■□□□□ 0.28
HDAC8-208ENST00000373583 KAT5Q92993 513 aa16.81■□□□□ 0.28
HDAC8-208ENST00000373583 EXOC4Q96A65 974 aa16.81■□□□□ 0.28
HDAC8-208ENST00000373583 OTUB2Q96DC9 234 aa16.81■□□□□ 0.28
HDAC8-208ENST00000373583 OSER1Q9NX31 292 aa16.81■□□□□ 0.28
HDAC8-208ENST00000373583 CFAP97Q9P2B7 532 aa16.81■□□□□ 0.28
HDAC8-208ENST00000373583 HESX1Q9UBX0 185 aa16.81■□□□□ 0.28
HDAC8-208ENST00000373583 CNTN6Q9UQ52 1028 aa16.81■□□□□ 0.28
HDAC8-208ENST00000373583 PCDHB4Q9Y5E5 795 aa16.81■□□□□ 0.28
HDAC8-208ENST00000373583 CD19P15391 556 aa16.8■□□□□ 0.28
HDAC8-208ENST00000373583 PLA2G4AP47712 749 aa16.8■□□□□ 0.28
HDAC8-208ENST00000373583 NR1H3Q13133 447 aa16.8■□□□□ 0.28
HDAC8-208ENST00000373583 STILQ15468 1287 aa16.8■□□□□ 0.28
HDAC8-208ENST00000373583 TPD52L1Q16890 204 aaPredicted RBP16.8■□□□□ 0.28
HDAC8-208ENST00000373583 PKDCCQ504Y2 493 aa16.8■□□□□ 0.28
HDAC8-208ENST00000373583 TRIM65Q6PJ69 517 aa16.8■□□□□ 0.28
HDAC8-208ENST00000373583 ZC3H14Q6PJT7 736 aaKnown RBP16.8■□□□□ 0.28
HDAC8-208ENST00000373583 LCLAT1Q6UWP7 414 aa16.8■□□□□ 0.28
HDAC8-208ENST00000373583 ENOSF1Q7L5Y1 443 aa16.8■□□□□ 0.28
HDAC8-208ENST00000373583 SPEM1Q8N4L4 309 aa16.8■□□□□ 0.28
HDAC8-208ENST00000373583 RBBP8NLQ8NC74 664 aaPredicted RBP16.8■□□□□ 0.28
HDAC8-208ENST00000373583 NELL1Q92832 810 aa16.8■□□□□ 0.28
HDAC8-208ENST00000373583 FAM81BQ96LP2 452 aa16.8■□□□□ 0.28
HDAC8-208ENST00000373583 KREMEN1Q96MU8 473 aa16.8■□□□□ 0.28
HDAC8-208ENST00000373583 LINC00597Q9H2U6 94 aa16.8■□□□□ 0.28
HDAC8-208ENST00000373583 NMUR1Q9HB89 426 aa16.8■□□□□ 0.28
HDAC8-208ENST00000373583 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.8■□□□□ 0.28
HDAC8-208ENST00000373583 CLIC5Q9NZA1 410 aa16.8■□□□□ 0.28
HDAC8-208ENST00000373583 TBC1D14Q9P2M4 693 aa16.8■□□□□ 0.28
HDAC8-208ENST00000373583 MYO15AQ9UKN7 3530 aa16.79■□□□□ 0.28
HDAC8-208ENST00000373583 A0A1W2PQH9 124 aa16.79■□□□□ 0.28
HDAC8-208ENST00000373583 PAPSS2O95340 614 aaPredicted RBP16.79■□□□□ 0.28
HDAC8-208ENST00000373583 CYP17A1P05093 508 aa16.79■□□□□ 0.28
HDAC8-208ENST00000373583 ATP5C1P36542 298 aaKnown RBP16.79■□□□□ 0.28
HDAC8-208ENST00000373583 MTIF2P46199 727 aaKnown RBP16.79■□□□□ 0.28
HDAC8-208ENST00000373583 CCR3P51677 355 aa16.79■□□□□ 0.28
HDAC8-208ENST00000373583 PDE4CQ08493 712 aa16.79■□□□□ 0.28
HDAC8-208ENST00000373583 GRSF1Q12849 480 aaKnown RBP eCLIP16.79■□□□□ 0.28
HDAC8-208ENST00000373583 GAS6Q14393 721 aa16.79■□□□□ 0.28
HDAC8-208ENST00000373583 MAN2A1Q16706 1144 aa16.79■□□□□ 0.28
HDAC8-208ENST00000373583 FSTL4Q6MZW2 842 aa16.79■□□□□ 0.28
HDAC8-208ENST00000373583 RRAGAQ7L523 313 aa16.79■□□□□ 0.28
HDAC8-208ENST00000373583 SCD5Q86SK9 330 aa16.79■□□□□ 0.28
HDAC8-208ENST00000373583 TADA2BQ86TJ2 420 aa16.79■□□□□ 0.28
HDAC8-208ENST00000373583 ARHGAP18Q8N392 663 aa16.79■□□□□ 0.28
HDAC8-208ENST00000373583 TFAP2BQ92481 460 aa16.79■□□□□ 0.28
HDAC8-208ENST00000373583 CDK5RAP1Q96SZ6 601 aaKnown RBP16.79■□□□□ 0.28
HDAC8-208ENST00000373583 FAM126AQ9BYI3 521 aaPredicted RBP16.79■□□□□ 0.28
HDAC8-208ENST00000373583 NACA2Q9H009 215 aa16.79■□□□□ 0.28
HDAC8-208ENST00000373583 SEMA4AQ9H3S1 761 aa16.79■□□□□ 0.28
HDAC8-208ENST00000373583 RBM12Q9NTZ6 932 aaKnown RBP16.79■□□□□ 0.28
HDAC8-208ENST00000373583 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.79■□□□□ 0.28
HDAC8-208ENST00000373583 ATG2BQ96BY7 2078 aa16.79■□□□□ 0.28
HDAC8-208ENST00000373583 USP34Q70CQ2 3546 aa16.79■□□□□ 0.28
HDAC8-208ENST00000373583 RNF225M0QZC1 329 aaPredicted RBP16.78■□□□□ 0.28
HDAC8-208ENST00000373583 MBD3O95983 291 aa16.78■□□□□ 0.28
HDAC8-208ENST00000373583 TDGF1P13385 188 aa16.78■□□□□ 0.28
HDAC8-208ENST00000373583 RARGP13631 454 aa16.78■□□□□ 0.28
HDAC8-208ENST00000373583 PRKCSHP14314 528 aaPredicted RBP16.78■□□□□ 0.28
HDAC8-208ENST00000373583 DRD1P21728 446 aa16.78■□□□□ 0.28
HDAC8-208ENST00000373583 GOLGA8FQ08AF8 430 aa16.78■□□□□ 0.28
HDAC8-208ENST00000373583 GOLGA8DPQ0D2H9 430 aa16.78■□□□□ 0.28
HDAC8-208ENST00000373583 PPP2R5DQ14738 602 aa16.78■□□□□ 0.28
HDAC8-208ENST00000373583 CNGA2Q16280 664 aa16.78■□□□□ 0.28
HDAC8-208ENST00000373583 MEA1Q16626 185 aa16.78■□□□□ 0.28
HDAC8-208ENST00000373583 GAB4Q2WGN9 574 aa16.78■□□□□ 0.28
HDAC8-208ENST00000373583 PM20D1Q6GTS8 502 aa16.78■□□□□ 0.28
HDAC8-208ENST00000373583 GBP6Q6ZN66 633 aa16.78■□□□□ 0.28
HDAC8-208ENST00000373583 Q6ZS52 159 aa16.78■□□□□ 0.28
HDAC8-208ENST00000373583 ALYREFQ86V81 257 aaKnown RBP16.78■□□□□ 0.28
HDAC8-208ENST00000373583 ADGRG2Q8IZP9 1017 aa16.78■□□□□ 0.28
HDAC8-208ENST00000373583 SCML4Q8N228 414 aa16.78■□□□□ 0.28
HDAC8-208ENST00000373583 KCTD13Q8WZ19 329 aa16.78■□□□□ 0.28
HDAC8-208ENST00000373583 CD101Q93033 1021 aa16.78■□□□□ 0.28
HDAC8-208ENST00000373583 P2RY13Q9BPV8 354 aa16.78■□□□□ 0.28
HDAC8-208ENST00000373583 KLF16Q9BXK1 252 aaPredicted RBP16.78■□□□□ 0.28
HDAC8-208ENST00000373583 APEX2Q9UBZ4 518 aa16.78■□□□□ 0.28
HDAC8-208ENST00000373583 NAGPAQ9UK23 515 aa16.78■□□□□ 0.28
HDAC8-208ENST00000373583 SH3BP1Q9Y3L3 701 aa16.78■□□□□ 0.28
HDAC8-208ENST00000373583 TULP2O00295 520 aa16.77■□□□□ 0.28
HDAC8-208ENST00000373583 GREM1O60565 184 aa16.77■□□□□ 0.28
HDAC8-208ENST00000373583 ZBED1O96006 694 aa16.77■□□□□ 0.28
HDAC8-208ENST00000373583 ADH1CP00326 375 aa16.77■□□□□ 0.28
HDAC8-208ENST00000373583 RALAP11233 206 aa16.77■□□□□ 0.28
HDAC8-208ENST00000373583 EIF2DP41214 584 aaKnown RBP16.77■□□□□ 0.28
HDAC8-208ENST00000373583 TKTL1P51854 596 aa16.77■□□□□ 0.28
HDAC8-208ENST00000373583 MFAP3P55082 362 aa16.77■□□□□ 0.28
HDAC8-208ENST00000373583 CSTF1Q05048 431 aaKnown RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms