RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 GABRG3Q99928 467 aa13.15□□□□□ -0.3
HDAC8-204ENST00000373560 PYM1Q9BRP8 204 aaKnown RBP13.15□□□□□ -0.3
HDAC8-204ENST00000373560 TUFT1Q9NNX1 390 aa13.15□□□□□ -0.3
HDAC8-204ENST00000373560 CFAP97Q9P2B7 532 aa13.15□□□□□ -0.3
HDAC8-204ENST00000373560 UXTQ9UBK9 157 aaPredicted RBP13.15□□□□□ -0.3
HDAC8-204ENST00000373560 DAXXQ9UER7 740 aaPredicted RBP13.15□□□□□ -0.3
HDAC8-204ENST00000373560 NFE2L3Q9Y4A8 694 aa13.15□□□□□ -0.3
HDAC8-204ENST00000373560 PCDHB1Q9Y5F3 818 aa13.15□□□□□ -0.3
HDAC8-204ENST00000373560 PCDHGA1Q9Y5H4 931 aa13.15□□□□□ -0.3
HDAC8-204ENST00000373560 HEMK1Q9Y5R4 338 aaPredicted RBP13.15□□□□□ -0.3
HDAC8-204ENST00000373560 USP9YO00507 2555 aaPredicted RBP13.14□□□□□ -0.31
HDAC8-204ENST00000373560 PRRT4C9JH25 899 aa13.14□□□□□ -0.31
HDAC8-204ENST00000373560 CYB561D2O14569 222 aa13.14□□□□□ -0.31
HDAC8-204ENST00000373560 PCDHGA12O60330 932 aa13.14□□□□□ -0.31
HDAC8-204ENST00000373560 CR2P20023 1033 aa13.14□□□□□ -0.31
HDAC8-204ENST00000373560 ACAT1P24752 427 aaKnown RBP13.14□□□□□ -0.31
HDAC8-204ENST00000373560 SUZ12Q15022 739 aaKnown RBP13.14□□□□□ -0.31
HDAC8-204ENST00000373560 ENOX2Q16206 610 aaKnown RBP13.14□□□□□ -0.31
HDAC8-204ENST00000373560 PRAMEF14Q5SWL7 426 aa13.14□□□□□ -0.31
HDAC8-204ENST00000373560 RNF20Q5VTR2 975 aa13.14□□□□□ -0.31
HDAC8-204ENST00000373560 SPATA1Q5VX52 437 aa13.14□□□□□ -0.31
HDAC8-204ENST00000373560 JADE1Q6IE81 842 aa13.14□□□□□ -0.31
HDAC8-204ENST00000373560 GALNT17Q6IS24 598 aa13.14□□□□□ -0.31
HDAC8-204ENST00000373560 TRMT11Q7Z4G4 463 aaKnown RBP13.14□□□□□ -0.31
HDAC8-204ENST00000373560 TRIM22Q8IYM9 498 aa13.14□□□□□ -0.31
HDAC8-204ENST00000373560 CHPFQ8IZ52 775 aa13.14□□□□□ -0.31
HDAC8-204ENST00000373560 RDH13Q8NBN7 331 aa13.14□□□□□ -0.31
HDAC8-204ENST00000373560 ZNF248Q8NDW4 579 aa13.14□□□□□ -0.31
HDAC8-204ENST00000373560 SNX19Q92543 992 aa13.14□□□□□ -0.31
HDAC8-204ENST00000373560 WBP2Q969T9 261 aa13.14□□□□□ -0.31
HDAC8-204ENST00000373560 CNDP2Q96KP4 475 aaKnown RBP13.14□□□□□ -0.31
HDAC8-204ENST00000373560 MTMR9Q96QG7 549 aa13.14□□□□□ -0.31
HDAC8-204ENST00000373560 PKMYT1Q99640 499 aa13.14□□□□□ -0.31
HDAC8-204ENST00000373560 AGXT2Q9BYV1 514 aa13.14□□□□□ -0.31
HDAC8-204ENST00000373560 FAM117AQ9C073 453 aa13.14□□□□□ -0.31
HDAC8-204ENST00000373560 ANKRD6Q9Y2G4 727 aa13.14□□□□□ -0.31
HDAC8-204ENST00000373560 E2F8A0AVK6 867 aa13.13□□□□□ -0.31
HDAC8-204ENST00000373560 ANO9A1A5B4 782 aa13.13□□□□□ -0.31
HDAC8-204ENST00000373560 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.13□□□□□ -0.31
HDAC8-204ENST00000373560 PIRO00625 290 aa13.13□□□□□ -0.31
HDAC8-204ENST00000373560 SLC16A4O15374 487 aa13.13□□□□□ -0.31
HDAC8-204ENST00000373560 FAM189A1O60320 539 aa13.13□□□□□ -0.31
HDAC8-204ENST00000373560 ADH1CP00326 375 aa13.13□□□□□ -0.31
HDAC8-204ENST00000373560 GRIK1P39086 918 aa13.13□□□□□ -0.31
HDAC8-204ENST00000373560 CCR10P46092 362 aa13.13□□□□□ -0.31
HDAC8-204ENST00000373560 PCBP4P57723 403 aaKnown RBP13.13□□□□□ -0.31
HDAC8-204ENST00000373560 PPP2R3AQ06190 1150 aa13.13□□□□□ -0.31
HDAC8-204ENST00000373560 MCL1Q07820 350 aa13.13□□□□□ -0.31
HDAC8-204ENST00000373560 VAC14Q08AM6 782 aa13.13□□□□□ -0.31
HDAC8-204ENST00000373560 MAPK7Q13164 816 aa13.13□□□□□ -0.31
HDAC8-204ENST00000373560 UBAP2LQ14157 1087 aaKnown RBP13.13□□□□□ -0.31
HDAC8-204ENST00000373560 FUT11Q495W5 492 aa13.13□□□□□ -0.31
HDAC8-204ENST00000373560 C4orf17Q53FE4 359 aa13.13□□□□□ -0.31
HDAC8-204ENST00000373560 NYAP1Q6ZVC0 841 aa13.13□□□□□ -0.31
HDAC8-204ENST00000373560 SNRNP27Q8WVK2 155 aaKnown RBP13.13□□□□□ -0.31
HDAC8-204ENST00000373560 KIFAP3Q92845 792 aa13.13□□□□□ -0.31
HDAC8-204ENST00000373560 TNFRSF25Q93038 417 aa13.13□□□□□ -0.31
HDAC8-204ENST00000373560 MKRN2Q9H000 416 aaKnown RBP13.13□□□□□ -0.31
HDAC8-204ENST00000373560 BHMT2Q9H2M3 363 aa13.13□□□□□ -0.31
HDAC8-204ENST00000373560 MYH11P35749 1972 aa13.12□□□□□ -0.31
HDAC8-204ENST00000373560 CKAP5Q14008 2032 aa13.12□□□□□ -0.31
HDAC8-204ENST00000373560 ABCA12Q86UK0 2595 aa13.12□□□□□ -0.31
HDAC8-204ENST00000373560 KLK10O43240 276 aa13.12□□□□□ -0.31
HDAC8-204ENST00000373560 TOM1L1O75674 476 aa13.12□□□□□ -0.31
HDAC8-204ENST00000373560 OLFM2O95897 454 aa13.12□□□□□ -0.31
HDAC8-204ENST00000373560 TPMTP51580 245 aa13.12□□□□□ -0.31
HDAC8-204ENST00000373560 SLC7A9P82251 487 aa13.12□□□□□ -0.31
HDAC8-204ENST00000373560 SHBQ15464 509 aa13.12□□□□□ -0.31
HDAC8-204ENST00000373560 BROXQ5VW32 411 aa13.12□□□□□ -0.31
HDAC8-204ENST00000373560 SCARA3Q6AZY7 606 aa13.12□□□□□ -0.31
HDAC8-204ENST00000373560 DCP1BQ8IZD4 617 aaKnown RBP13.12□□□□□ -0.31
HDAC8-204ENST00000373560 CADM4Q8NFZ8 388 aa13.12□□□□□ -0.31
HDAC8-204ENST00000373560 IGSF8Q969P0 613 aa13.12□□□□□ -0.31
HDAC8-204ENST00000373560 JAKMIP1Q96N16 626 aaKnown RBP13.12□□□□□ -0.31
HDAC8-204ENST00000373560 NAP1L4Q99733 375 aaKnown RBP13.12□□□□□ -0.31
HDAC8-204ENST00000373560 C6orf106Q9H6K1 298 aaPredicted RBP13.12□□□□□ -0.31
HDAC8-204ENST00000373560 PLEKHA5Q9HAU0 1116 aa13.12□□□□□ -0.31
HDAC8-204ENST00000373560 TM9SF3Q9HD45 589 aa13.12□□□□□ -0.31
HDAC8-204ENST00000373560 FBN2P35556 2912 aa13.12□□□□□ -0.31
HDAC8-204ENST00000373560 MYH10P35580 1976 aa13.11□□□□□ -0.31
HDAC8-204ENST00000373560 HOXC11O43248 304 aaPredicted RBP13.11□□□□□ -0.31
HDAC8-204ENST00000373560 NEMFO60524 1076 aa13.11□□□□□ -0.31
HDAC8-204ENST00000373560 HIP1RO75146 1068 aa13.11□□□□□ -0.31
HDAC8-204ENST00000373560 CLTAP09496 248 aa13.11□□□□□ -0.31
HDAC8-204ENST00000373560 GLDCP23378 1020 aa13.11□□□□□ -0.31
HDAC8-204ENST00000373560 CTSKP43235 329 aa13.11□□□□□ -0.31
HDAC8-204ENST00000373560 UCNP55089 124 aa13.11□□□□□ -0.31
HDAC8-204ENST00000373560 INSM1Q01101 510 aaPredicted RBP13.11□□□□□ -0.31
HDAC8-204ENST00000373560 SMARCB1Q12824 385 aa13.11□□□□□ -0.31
HDAC8-204ENST00000373560 PDIA5Q14554 519 aa13.11□□□□□ -0.31
HDAC8-204ENST00000373560 KDM7AQ6ZMT4 941 aa13.11□□□□□ -0.31
HDAC8-204ENST00000373560 FAM124AQ86V42 546 aa13.11□□□□□ -0.31
HDAC8-204ENST00000373560 OSTM1Q86WC4 334 aa13.11□□□□□ -0.31
HDAC8-204ENST00000373560 TMEM25Q86YD3 366 aa13.11□□□□□ -0.31
HDAC8-204ENST00000373560 SCN4BQ8IWT1 228 aa13.11□□□□□ -0.31
HDAC8-204ENST00000373560 DHX40Q8IX18 779 aaKnown RBP13.11□□□□□ -0.31
HDAC8-204ENST00000373560 THEM5Q8N1Q8 247 aa13.11□□□□□ -0.31
HDAC8-204ENST00000373560 LEO1Q8WVC0 666 aaPredicted RBP13.11□□□□□ -0.31
HDAC8-204ENST00000373560 KMT5AQ9NQR1 393 aa13.11□□□□□ -0.31
HDAC8-204ENST00000373560 ITM2CQ9NQX7 267 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms