RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 NOMO1Q15155 1222 aa20.45■□□□□ 0.86
HDAC1-201ENST00000373548 UNC45BQ8IWX7 931 aa20.45■□□□□ 0.86
HDAC1-201ENST00000373548 RNF169Q8NCN4 708 aa20.45■□□□□ 0.86
HDAC1-201ENST00000373548 RBM15Q96T37 977 aaKnown RBP eCLIP20.45■□□□□ 0.867e-7■■■■□ 24.8
HDAC1-201ENST00000373548 TIMM13Q9Y5L4 95 aaPredicted RBP20.45■□□□□ 0.86
HDAC1-201ENST00000373548 RASGRF2O14827 1237 aa20.44■□□□□ 0.86
HDAC1-201ENST00000373548 MCF2LO15068 1137 aa20.44■□□□□ 0.86
HDAC1-201ENST00000373548 RBP3P10745 1247 aa20.44■□□□□ 0.86
HDAC1-201ENST00000373548 RPL9P32969 192 aaKnown RBP20.44■□□□□ 0.86
HDAC1-201ENST00000373548 SLCO1A2P46721 670 aa20.44■□□□□ 0.86
HDAC1-201ENST00000373548 ACLYP53396 1101 aa20.44■□□□□ 0.86
HDAC1-201ENST00000373548 ATXN1P54253 815 aaKnown RBP20.44■□□□□ 0.86
HDAC1-201ENST00000373548 ADCY1Q08828 1119 aa20.44■□□□□ 0.86
HDAC1-201ENST00000373548 FAM26DQ5JW98 314 aa20.44■□□□□ 0.86
HDAC1-201ENST00000373548 DSTYKQ6XUX3 929 aa20.44■□□□□ 0.86
HDAC1-201ENST00000373548 CLEC20AQ6ZU45 233 aa20.44■□□□□ 0.86
HDAC1-201ENST00000373548 TMEM86AQ8N2M4 240 aa20.44■□□□□ 0.86
HDAC1-201ENST00000373548 CD99L2Q8TCZ2 262 aa20.44■□□□□ 0.86
HDAC1-201ENST00000373548 RSAD2Q8WXG1 361 aa20.44■□□□□ 0.86
HDAC1-201ENST00000373548 NDRG1Q92597 394 aaKnown RBP20.44■□□□□ 0.86
HDAC1-201ENST00000373548 NOD1Q9Y239 953 aa20.44■□□□□ 0.86
HDAC1-201ENST00000373548 A0A0U1RQF3 1178 aa20.44■□□□□ 0.86
HDAC1-201ENST00000373548 RGS16O15492 202 aaPredicted RBP20.44■□□□□ 0.86
HDAC1-201ENST00000373548 LHX1P48742 406 aa20.44■□□□□ 0.86
HDAC1-201ENST00000373548 SLC8A3P57103 927 aa20.44■□□□□ 0.86
HDAC1-201ENST00000373548 AUHQ13825 339 aaKnown RBP20.44■□□□□ 0.86
HDAC1-201ENST00000373548 UPP1Q16831 310 aa20.44■□□□□ 0.86
HDAC1-201ENST00000373548 EFHC1Q5JVL4 640 aa20.44■□□□□ 0.86
HDAC1-201ENST00000373548 RNF180Q86T96 592 aa20.44■□□□□ 0.86
HDAC1-201ENST00000373548 PQLC3Q8N755 202 aa20.44■□□□□ 0.86
HDAC1-201ENST00000373548 ADAM2Q99965 735 aa20.44■□□□□ 0.86
HDAC1-201ENST00000373548 SYT15Q9BQS2 421 aa20.44■□□□□ 0.86
HDAC1-201ENST00000373548 MED10Q9BTT4 135 aa20.44■□□□□ 0.86
HDAC1-201ENST00000373548 ROPN1BQ9BZX4 212 aaPredicted RBP20.44■□□□□ 0.86
HDAC1-201ENST00000373548 ROPN1Q9HAT0 212 aaPredicted RBP20.44■□□□□ 0.86
HDAC1-201ENST00000373548 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.44■□□□□ 0.863e-8■■□□□ 12.7
HDAC1-201ENST00000373548 SHOC2Q9UQ13 582 aa20.44■□□□□ 0.86
HDAC1-201ENST00000373548 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.44■□□□□ 0.86
HDAC1-201ENST00000373548 TSC2P49815 1807 aa20.43■□□□□ 0.86
HDAC1-201ENST00000373548 IBSPP21815 317 aaPredicted RBP20.43■□□□□ 0.86
HDAC1-201ENST00000373548 RPL22P35268 128 aaKnown RBP20.43■□□□□ 0.86
HDAC1-201ENST00000373548 IFI35P80217 286 aaPredicted RBP20.43■□□□□ 0.86
HDAC1-201ENST00000373548 DEFB115Q30KQ5 88 aa20.43■□□□□ 0.86
HDAC1-201ENST00000373548 ANKRD20A8PQ5CZ79 823 aa20.43■□□□□ 0.86
HDAC1-201ENST00000373548 VSIG1Q86XK7 387 aa20.43■□□□□ 0.86
HDAC1-201ENST00000373548 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.43■□□□□ 0.86
HDAC1-201ENST00000373548 KCTD13Q8WZ19 329 aa20.43■□□□□ 0.86
HDAC1-201ENST00000373548 PRCCQ92733 491 aaPredicted RBP20.43■□□□□ 0.86
HDAC1-201ENST00000373548 P3H4Q92791 437 aa20.43■□□□□ 0.86
HDAC1-201ENST00000373548 C9orf72Q96LT7 481 aa20.43■□□□□ 0.86
HDAC1-201ENST00000373548 FARP1Q9Y4F1 1045 aaPredicted RBP20.43■□□□□ 0.86
HDAC1-201ENST00000373548 CABYRO75952 493 aa20.42■□□□□ 0.86
HDAC1-201ENST00000373548 POMCP01189 267 aa20.42■□□□□ 0.86
HDAC1-201ENST00000373548 LSP1P33241 339 aa20.42■□□□□ 0.86
HDAC1-201ENST00000373548 MAGEA4P43358 317 aa20.42■□□□□ 0.86
HDAC1-201ENST00000373548 HNRNPH2P55795 449 aaKnown RBP20.42■□□□□ 0.86
HDAC1-201ENST00000373548 LONRF1Q17RB8 773 aa20.42■□□□□ 0.86
HDAC1-201ENST00000373548 TIGD5Q53EQ6 642 aa20.42■□□□□ 0.86
HDAC1-201ENST00000373548 TNFAIP8L3Q5GJ75 292 aa20.42■□□□□ 0.86
HDAC1-201ENST00000373548 ERMARDQ5T6L9 678 aa20.42■□□□□ 0.86
HDAC1-201ENST00000373548 MFSD5Q6N075 450 aa20.42■□□□□ 0.86
HDAC1-201ENST00000373548 CEP128Q6ZU80 1094 aa20.42■□□□□ 0.86
HDAC1-201ENST00000373548 PLD5Q8N7P1 536 aa20.42■□□□□ 0.86
HDAC1-201ENST00000373548 FAM71DQ8N9W8 422 aa20.42■□□□□ 0.86
HDAC1-201ENST00000373548 PCDH19Q8TAB3 1148 aa20.42■□□□□ 0.86
HDAC1-201ENST00000373548 KRT82Q9NSB4 513 aa20.42■□□□□ 0.86
HDAC1-201ENST00000373548 PRDM4Q9UKN5 801 aa20.42■□□□□ 0.86
HDAC1-201ENST00000373548 HTTP42858 3142 aa20.42■□□□□ 0.86
HDAC1-201ENST00000373548 NDC80O14777 642 aa20.42■□□□□ 0.86
HDAC1-201ENST00000373548 AGTP01019 485 aa20.42■□□□□ 0.86
HDAC1-201ENST00000373548 MATKP42679 507 aa20.42■□□□□ 0.86
HDAC1-201ENST00000373548 PPARDQ03181 441 aa20.42■□□□□ 0.86
HDAC1-201ENST00000373548 SLC9A4Q6AI14 798 aa20.42■□□□□ 0.86
HDAC1-201ENST00000373548 C1orf228Q6PIY5 440 aa20.42■□□□□ 0.86
HDAC1-201ENST00000373548 REM2Q8IYK8 340 aaPredicted RBP20.42■□□□□ 0.86
HDAC1-201ENST00000373548 DEFB106AQ8N104 65 aa20.42■□□□□ 0.86
HDAC1-201ENST00000373548 FAF2Q96CS3 445 aa20.42■□□□□ 0.86
HDAC1-201ENST00000373548 ZNF670Q9BS34 389 aa20.42■□□□□ 0.86
HDAC1-201ENST00000373548 SAYSD1Q9NPB0 183 aa20.42■□□□□ 0.86
HDAC1-201ENST00000373548 CALCOCO1Q9P1Z2 691 aa20.42■□□□□ 0.86
HDAC1-201ENST00000373548 MYBPHLA2RUH7 354 aa20.41■□□□□ 0.86
HDAC1-201ENST00000373548 TRPA1O75762 1119 aa20.41■□□□□ 0.86
HDAC1-201ENST00000373548 FAM200BP0CF97 657 aa20.41■□□□□ 0.86
HDAC1-201ENST00000373548 HOXD10P28358 340 aa20.41■□□□□ 0.86
HDAC1-201ENST00000373548 L1CAMP32004 1257 aa20.41■□□□□ 0.86
HDAC1-201ENST00000373548 CTCFP49711 727 aaPredicted RBP20.41■□□□□ 0.86
HDAC1-201ENST00000373548 NDUFV1P49821 464 aa20.41■□□□□ 0.86
HDAC1-201ENST00000373548 MAP3K7CLP57077 242 aa20.41■□□□□ 0.86
HDAC1-201ENST00000373548 MRPS5P82675 430 aaKnown RBP20.41■□□□□ 0.86
HDAC1-201ENST00000373548 ROR1Q01973 937 aa20.41■□□□□ 0.86
HDAC1-201ENST00000373548 DPYSL2Q16555 572 aa20.41■□□□□ 0.86
HDAC1-201ENST00000373548 PPP6R3Q5H9R7 873 aaPredicted RBP20.41■□□□□ 0.86
HDAC1-201ENST00000373548 FOXR1Q6PIV2 292 aa20.41■□□□□ 0.86
HDAC1-201ENST00000373548 B4GALNT4Q76KP1 1039 aa20.41■□□□□ 0.86
HDAC1-201ENST00000373548 STRADAQ7RTN6 431 aa20.41■□□□□ 0.86
HDAC1-201ENST00000373548 ZC3H18Q86VM9 953 aaKnown RBP20.41■□□□□ 0.86
HDAC1-201ENST00000373548 CPT1BQ92523 772 aa20.41■□□□□ 0.86
HDAC1-201ENST00000373548 FAM149B1Q96BN6 582 aa20.41■□□□□ 0.86
HDAC1-201ENST00000373548 LRRC4Q9HBW1 653 aa20.41■□□□□ 0.86
HDAC1-201ENST00000373548 ZNF487B1APH4 448 aa20.41■□□□□ 0.86
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