RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 DEUP1Q05D60 604 aa13.73□□□□□ -0.21
NCDN-203ENST00000373253 FNBP1LQ5T0N5 605 aa13.73□□□□□ -0.21
NCDN-203ENST00000373253 SPATA21Q7Z572 469 aa13.73□□□□□ -0.21
NCDN-203ENST00000373253 PCGF5Q86SE9 256 aa13.73□□□□□ -0.21
NCDN-203ENST00000373253 PPIL6Q8IXY8 311 aa13.73□□□□□ -0.21
NCDN-203ENST00000373253 ERP27Q96DN0 273 aa13.73□□□□□ -0.21
NCDN-203ENST00000373253 GON4LQ3T8J9 2241 aa13.73□□□□□ -0.21
NCDN-203ENST00000373253 TRIM49D1C9J1S8 452 aa13.73□□□□□ -0.21
NCDN-203ENST00000373253 COPEO14579 308 aa13.73□□□□□ -0.21
NCDN-203ENST00000373253 STRNO43815 780 aa13.73□□□□□ -0.21
NCDN-203ENST00000373253 UBOX5O94941 541 aa13.73□□□□□ -0.21
NCDN-203ENST00000373253 UPP2O95045 317 aa13.73□□□□□ -0.21
NCDN-203ENST00000373253 ELNP15502 786 aa13.73□□□□□ -0.21
NCDN-203ENST00000373253 ADRA1DP25100 572 aa13.73□□□□□ -0.21
NCDN-203ENST00000373253 ARL1P40616 181 aaPredicted RBP13.73□□□□□ -0.21
NCDN-203ENST00000373253 SEPT6Q14141 434 aa13.73□□□□□ -0.21
NCDN-203ENST00000373253 DUSP28Q4G0W2 176 aa13.73□□□□□ -0.21
NCDN-203ENST00000373253 PIGZQ86VD9 579 aa13.73□□□□□ -0.21
NCDN-203ENST00000373253 OLIG1Q8TAK6 271 aa13.73□□□□□ -0.21
NCDN-203ENST00000373253 ATXN3LQ9H3M9 355 aa13.73□□□□□ -0.21
NCDN-203ENST00000373253 YY1AP1Q9H869 796 aa13.73□□□□□ -0.21
NCDN-203ENST00000373253 SLC24A3Q9HC58 644 aa13.73□□□□□ -0.21
NCDN-203ENST00000373253 UBN1Q9NPG3 1134 aa13.73□□□□□ -0.21
NCDN-203ENST00000373253 DDX43Q9NXZ2 648 aaKnown RBP13.73□□□□□ -0.21
NCDN-203ENST00000373253 PCDH10Q9P2E7 1040 aa13.73□□□□□ -0.21
NCDN-203ENST00000373253 NENFQ9UMX5 172 aa13.73□□□□□ -0.21
NCDN-203ENST00000373253 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.73□□□□□ -0.21
NCDN-203ENST00000373253 SNX10Q9Y5X0 201 aa13.73□□□□□ -0.21
NCDN-203ENST00000373253 NRXN2Q9P2S2 1712 aa13.73□□□□□ -0.21
NCDN-203ENST00000373253 GOT1P17174 413 aa13.72□□□□□ -0.21
NCDN-203ENST00000373253 TKTL1P51854 596 aa13.72□□□□□ -0.21
NCDN-203ENST00000373253 KBTBD12Q3ZCT8 623 aa13.72□□□□□ -0.21
NCDN-203ENST00000373253 OLFML2BQ68BL8 750 aa13.72□□□□□ -0.21
NCDN-203ENST00000373253 KCNT2Q6UVM3 1135 aa13.72□□□□□ -0.21
NCDN-203ENST00000373253 PDCD7Q8N8D1 485 aaKnown RBP13.72□□□□□ -0.21
NCDN-203ENST00000373253 PPTC7Q8NI37 304 aa13.72□□□□□ -0.21
NCDN-203ENST00000373253 CCHCR1Q8TD31 782 aa13.72□□□□□ -0.21
NCDN-203ENST00000373253 GPR152Q8TDT2 470 aa13.72□□□□□ -0.21
NCDN-203ENST00000373253 BHMTQ93088 406 aa13.72□□□□□ -0.21
NCDN-203ENST00000373253 UBQLN1Q9UMX0 589 aaKnown RBP13.72□□□□□ -0.21
NCDN-203ENST00000373253 MFHAS1Q9Y4C4 1052 aa13.72□□□□□ -0.21
NCDN-203ENST00000373253 COL2A1P02458 1487 aaPredicted RBP13.72□□□□□ -0.21
NCDN-203ENST00000373253 SMIM28A0A1B0GU29 152 aa13.72□□□□□ -0.21
NCDN-203ENST00000373253 PSEN2P49810 448 aa13.72□□□□□ -0.21
NCDN-203ENST00000373253 SIX1Q15475 284 aaPredicted RBP13.72□□□□□ -0.21
NCDN-203ENST00000373253 CNGA2Q16280 664 aa13.72□□□□□ -0.21
NCDN-203ENST00000373253 FSCN1Q16658 493 aaKnown RBP13.72□□□□□ -0.21
NCDN-203ENST00000373253 TAPT1Q6NXT6 567 aa13.72□□□□□ -0.21
NCDN-203ENST00000373253 CD302Q8IX05 232 aa13.72□□□□□ -0.21
NCDN-203ENST00000373253 TMEM40Q8WWA1 233 aa13.72□□□□□ -0.21
NCDN-203ENST00000373253 KCNK16Q96T55 309 aa13.72□□□□□ -0.21
NCDN-203ENST00000373253 ZNF518BQ9C0D4 1074 aa13.72□□□□□ -0.21
NCDN-203ENST00000373253 PYGBP11216 843 aa13.72□□□□□ -0.21
NCDN-203ENST00000373253 EDNRBP24530 442 aa13.72□□□□□ -0.21
NCDN-203ENST00000373253 IGFBP6P24592 240 aaPredicted RBP13.72□□□□□ -0.21
NCDN-203ENST00000373253 AFF1P51825 1210 aaKnown RBP13.72□□□□□ -0.21
NCDN-203ENST00000373253 RAPH1Q70E73 1250 aa13.72□□□□□ -0.21
NCDN-203ENST00000373253 RSPH3Q86UC2 560 aa13.72□□□□□ -0.21
NCDN-203ENST00000373253 ARMC2Q8NEN0 867 aa13.72□□□□□ -0.21
NCDN-203ENST00000373253 FAM136AQ96C01 138 aa13.72□□□□□ -0.21
NCDN-203ENST00000373253 FAM193BQ96PV7 902 aaPredicted RBP13.72□□□□□ -0.21
NCDN-203ENST00000373253 SUFUQ9UMX1 484 aa13.72□□□□□ -0.21
NCDN-203ENST00000373253 TRUB2O95900 331 aaKnown RBP13.71□□□□□ -0.21
NCDN-203ENST00000373253 GRIA1P42261 906 aa13.71□□□□□ -0.21
NCDN-203ENST00000373253 PITX1P78337 314 aaPredicted RBP13.71□□□□□ -0.21
NCDN-203ENST00000373253 OLIG2Q13516 323 aa13.71□□□□□ -0.21
NCDN-203ENST00000373253 TRPM8Q7Z2W7 1104 aa13.71□□□□□ -0.21
NCDN-203ENST00000373253 TTC30AQ86WT1 665 aa13.71□□□□□ -0.21
NCDN-203ENST00000373253 ALLCQ8N6M5 410 aa13.71□□□□□ -0.21
NCDN-203ENST00000373253 TNIP3Q96KP6 325 aa13.71□□□□□ -0.21
NCDN-203ENST00000373253 SERPINB12Q96P63 405 aa13.71□□□□□ -0.21
NCDN-203ENST00000373253 ECT2Q9H8V3 914 aa13.71□□□□□ -0.21
NCDN-203ENST00000373253 AAASQ9NRG9 546 aa13.71□□□□□ -0.21
NCDN-203ENST00000373253 ABI2Q9NYB9 513 aaPredicted RBP13.71□□□□□ -0.21
NCDN-203ENST00000373253 SIPA1L1O43166 1804 aa13.71□□□□□ -0.21
NCDN-203ENST00000373253 ADGRA2Q96PE1 1338 aa13.71□□□□□ -0.21
NCDN-203ENST00000373253 LTBP3Q9NS15 1303 aa13.71□□□□□ -0.21
NCDN-203ENST00000373253 C2orf71A6NGG8 1288 aa13.71□□□□□ -0.21
NCDN-203ENST00000373253 TARSP26639 723 aaKnown RBP13.71□□□□□ -0.21
NCDN-203ENST00000373253 EPHB2P29323 1055 aa13.71□□□□□ -0.21
NCDN-203ENST00000373253 GPD2P43304 727 aa13.71□□□□□ -0.21
NCDN-203ENST00000373253 BRCC3P46736 316 aa13.71□□□□□ -0.21
NCDN-203ENST00000373253 DPYSL3Q14195 570 aa13.71□□□□□ -0.21
NCDN-203ENST00000373253 MSS51Q4VC12 460 aa13.71□□□□□ -0.21
NCDN-203ENST00000373253 PPP1R2P3Q6NXS1 205 aa13.71□□□□□ -0.21
NCDN-203ENST00000373253 ZCCHC23Q6ZST2 131 aa13.71□□□□□ -0.21
NCDN-203ENST00000373253 HIPK4Q8NE63 616 aa13.71□□□□□ -0.21
NCDN-203ENST00000373253 TMEM237Q96Q45 408 aa13.71□□□□□ -0.21
NCDN-203ENST00000373253 C16orf70Q9BSU1 422 aa13.71□□□□□ -0.21
NCDN-203ENST00000373253 SLC17A6Q9P2U8 582 aa13.71□□□□□ -0.21
NCDN-203ENST00000373253 SLC12A6Q9UHW9 1150 aa13.71□□□□□ -0.21
NCDN-203ENST00000373253 USP15Q9Y4E8 981 aaPredicted RBP13.71□□□□□ -0.21
NCDN-203ENST00000373253 TROVE2P10155 538 aaKnown RBP eCLIP13.71□□□□□ -0.22
NCDN-203ENST00000373253 ZNF268Q14587 947 aaPredicted RBP13.71□□□□□ -0.22
NCDN-203ENST00000373253 TRIM68Q6AZZ1 485 aa13.71□□□□□ -0.22
NCDN-203ENST00000373253 ZNF560Q96MR9 790 aa13.71□□□□□ -0.22
NCDN-203ENST00000373253 TBCBQ99426 244 aa13.71□□□□□ -0.22
NCDN-203ENST00000373253 PSMC3IPQ9P2W1 217 aaPredicted RBP13.71□□□□□ -0.22
NCDN-203ENST00000373253 ITGA11Q9UKX5 1188 aa13.71□□□□□ -0.22
NCDN-203ENST00000373253 STYXL1Q9Y6J8 313 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 152.8 ms