RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 ACBD5Q5T8D3 534 aaPredicted RBP14.24□□□□□ -0.13
USP49-201ENST00000373006 MROH9Q5TGP6 573 aa14.24□□□□□ -0.13
USP49-201ENST00000373006 TTC39BQ5VTQ0 682 aaPredicted RBP14.24□□□□□ -0.13
USP49-201ENST00000373006 RNF111Q6ZNA4 994 aa14.24□□□□□ -0.13
USP49-201ENST00000373006 AZIN2Q96A70 460 aa14.24□□□□□ -0.13
USP49-201ENST00000373006 PHF12Q96QT6 1004 aa14.24□□□□□ -0.13
USP49-201ENST00000373006 ZNF341Q9BYN7 854 aa14.24□□□□□ -0.13
USP49-201ENST00000373006 IMPG2Q9BZV3 1241 aa14.24□□□□□ -0.13
USP49-201ENST00000373006 C17orf75Q9HAS0 396 aa14.24□□□□□ -0.13
USP49-201ENST00000373006 RAB6BQ9NRW1 208 aa14.24□□□□□ -0.13
USP49-201ENST00000373006 CISHQ9NSE2 258 aa14.24□□□□□ -0.13
USP49-201ENST00000373006 ETNK2Q9NVF9 386 aa14.24□□□□□ -0.13
USP49-201ENST00000373006 SYNPO2Q9UMS6 1093 aa14.24□□□□□ -0.13
USP49-201ENST00000373006 A0A088AWK7 358 aa14.23□□□□□ -0.13
USP49-201ENST00000373006 K7ERI5 159 aa14.23□□□□□ -0.13
USP49-201ENST00000373006 MCF2LO15068 1137 aa14.23□□□□□ -0.13
USP49-201ENST00000373006 BUD23O43709 281 aaKnown RBP14.23□□□□□ -0.13
USP49-201ENST00000373006 DGAT1O75907 488 aa14.23□□□□□ -0.13
USP49-201ENST00000373006 CRLF3Q8IUI8 442 aa14.23□□□□□ -0.13
USP49-201ENST00000373006 TTC13Q8NBP0 860 aa14.23□□□□□ -0.13
USP49-201ENST00000373006 PPP2R3CQ969Q6 453 aa14.23□□□□□ -0.13
USP49-201ENST00000373006 OPTNQ96CV9 577 aa14.23□□□□□ -0.13
USP49-201ENST00000373006 CYP4F11Q9HBI6 524 aa14.23□□□□□ -0.13
USP49-201ENST00000373006 CYP26B1Q9NR63 512 aa14.23□□□□□ -0.13
USP49-201ENST00000373006 CNTN6Q9UQ52 1028 aa14.23□□□□□ -0.13
USP49-201ENST00000373006 LOXHD1Q8IVV2 1947 aa14.23□□□□□ -0.13
USP49-201ENST00000373006 TXNDC9O14530 226 aa14.23□□□□□ -0.13
USP49-201ENST00000373006 LYPLA1O75608 230 aaPredicted RBP14.23□□□□□ -0.13
USP49-201ENST00000373006 KRT37O76014 449 aa14.23□□□□□ -0.13
USP49-201ENST00000373006 STBD1O95210 358 aa14.23□□□□□ -0.13
USP49-201ENST00000373006 EDN1P05305 212 aa14.23□□□□□ -0.13
USP49-201ENST00000373006 SNRPAP09012 282 aaKnown RBP14.23□□□□□ -0.13
USP49-201ENST00000373006 CD19P15391 556 aa14.23□□□□□ -0.13
USP49-201ENST00000373006 FUT4P22083 530 aa14.23□□□□□ -0.13
USP49-201ENST00000373006 TNFSF9P41273 254 aa14.23□□□□□ -0.13
USP49-201ENST00000373006 ATG16L1Q676U5 607 aa14.23□□□□□ -0.13
USP49-201ENST00000373006 DENND1BQ6P3S1 775 aa14.23□□□□□ -0.13
USP49-201ENST00000373006 C1orf228Q6PIY5 440 aa14.23□□□□□ -0.13
USP49-201ENST00000373006 CCDC60Q8IWA6 550 aaPredicted RBP14.23□□□□□ -0.13
USP49-201ENST00000373006 NDUFAF2Q8N183 169 aa14.23□□□□□ -0.13
USP49-201ENST00000373006 JDP2Q8WYK2 163 aa14.23□□□□□ -0.13
USP49-201ENST00000373006 C7orf26Q96N11 449 aa14.23□□□□□ -0.13
USP49-201ENST00000373006 SMYD2Q9NRG4 433 aa14.23□□□□□ -0.13
USP49-201ENST00000373006 H0YIN7 160 aa14.22□□□□□ -0.13
USP49-201ENST00000373006 KLF11O14901 512 aa14.22□□□□□ -0.13
USP49-201ENST00000373006 TOM1L1O75674 476 aa14.22□□□□□ -0.13
USP49-201ENST00000373006 OR6B1O95007 311 aa14.22□□□□□ -0.13
USP49-201ENST00000373006 GRIA2P42262 883 aa14.22□□□□□ -0.13
USP49-201ENST00000373006 PRKCEQ02156 737 aa14.22□□□□□ -0.13
USP49-201ENST00000373006 HIC1Q14526 733 aa14.22□□□□□ -0.13
USP49-201ENST00000373006 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.22□□□□□ -0.13
USP49-201ENST00000373006 PTPN20Q4JDL3 420 aa14.22□□□□□ -0.13
USP49-201ENST00000373006 DNAL1Q4LDG9 190 aa14.22□□□□□ -0.13
USP49-201ENST00000373006 ZBTB33Q86T24 672 aa14.22□□□□□ -0.13
USP49-201ENST00000373006 MCPH1Q8NEM0 835 aa14.22□□□□□ -0.13
USP49-201ENST00000373006 OR6Y1Q8NGX8 325 aa14.22□□□□□ -0.13
USP49-201ENST00000373006 CENPKQ9BS16 269 aa14.22□□□□□ -0.13
USP49-201ENST00000373006 MTMR12Q9C0I1 747 aa14.22□□□□□ -0.13
USP49-201ENST00000373006 ZC3H7BQ9UGR2 993 aaKnown RBP14.22□□□□□ -0.13
USP49-201ENST00000373006 CYTH4Q9UIA0 394 aa14.22□□□□□ -0.13
USP49-201ENST00000373006 SLX4Q8IY92 1834 aa14.22□□□□□ -0.13
USP49-201ENST00000373006 TTLL13PA6NNM8 815 aa14.22□□□□□ -0.13
USP49-201ENST00000373006 RFPL1O75677 317 aa14.22□□□□□ -0.13
USP49-201ENST00000373006 KRT7P08729 469 aa14.22□□□□□ -0.13
USP49-201ENST00000373006 STIP1P31948 543 aaKnown RBP14.22□□□□□ -0.13
USP49-201ENST00000373006 ZNF132P52740 706 aa14.22□□□□□ -0.13
USP49-201ENST00000373006 AQP4P55087 323 aa14.22□□□□□ -0.13
USP49-201ENST00000373006 PSMC1P62191 440 aaKnown RBP14.22□□□□□ -0.13
USP49-201ENST00000373006 PEX6Q13608 980 aa14.22□□□□□ -0.13
USP49-201ENST00000373006 HADHQ16836 314 aaKnown RBP14.22□□□□□ -0.13
USP49-201ENST00000373006 RAB6CQ53S08 254 aa14.22□□□□□ -0.13
USP49-201ENST00000373006 DENND5BQ6ZUT9 1274 aa14.22□□□□□ -0.13
USP49-201ENST00000373006 MARK2Q7KZI7 788 aaKnown RBP14.22□□□□□ -0.13
USP49-201ENST00000373006 RAB6CQ9H0N0 254 aa14.22□□□□□ -0.13
USP49-201ENST00000373006 DEFB129Q9H1M3 183 aa14.22□□□□□ -0.13
USP49-201ENST00000373006 ADAMTS6Q9UKP5 1117 aa14.22□□□□□ -0.13
USP49-201ENST00000373006 SCN9AQ15858 1988 aa14.22□□□□□ -0.13
USP49-201ENST00000373006 YDJCA8MPS7 323 aa14.22□□□□□ -0.13
USP49-201ENST00000373006 H7C0C1 242 aa14.22□□□□□ -0.13
USP49-201ENST00000373006 HNRNPCP07910 306 aaKnown RBP eCLIP14.22□□□□□ -0.13
USP49-201ENST00000373006 ATP5OP48047 213 aa14.22□□□□□ -0.13
USP49-201ENST00000373006 DLG1Q12959 904 aa14.22□□□□□ -0.13
USP49-201ENST00000373006 MED21Q13503 144 aa14.22□□□□□ -0.13
USP49-201ENST00000373006 SMAD1Q15797 465 aaKnown RBP14.22□□□□□ -0.13
USP49-201ENST00000373006 SH3PXD2AQ5TCZ1 1133 aa14.22□□□□□ -0.13
USP49-201ENST00000373006 FAM91A1Q658Y4 838 aa14.22□□□□□ -0.13
USP49-201ENST00000373006 SATL1Q86VE3 508 aa14.22□□□□□ -0.13
USP49-201ENST00000373006 ST13P4Q8IZP2 240 aaPredicted RBP14.22□□□□□ -0.13
USP49-201ENST00000373006 PPP1R14CQ8TAE6 165 aa14.22□□□□□ -0.13
USP49-201ENST00000373006 ATP6V0A1Q93050 837 aa14.22□□□□□ -0.13
USP49-201ENST00000373006 CGRRF1Q99675 332 aa14.22□□□□□ -0.13
USP49-201ENST00000373006 S100A14Q9HCY8 104 aa14.22□□□□□ -0.13
USP49-201ENST00000373006 PDLIM7Q9NR12 457 aa14.22□□□□□ -0.13
USP49-201ENST00000373006 PXMP2Q9NR77 195 aa14.22□□□□□ -0.13
USP49-201ENST00000373006 CLIC5Q9NZA1 410 aa14.22□□□□□ -0.13
USP49-201ENST00000373006 ZNF232Q9UNY5 417 aa14.22□□□□□ -0.13
USP49-201ENST00000373006 HBS1LQ9Y450 684 aaKnown RBP14.22□□□□□ -0.13
USP49-201ENST00000373006 TTLL3Q9Y4R7 772 aa14.22□□□□□ -0.13
USP49-201ENST00000373006 CTDP1Q9Y5B0 961 aaPredicted RBP14.22□□□□□ -0.13
USP49-201ENST00000373006 CNTNAP2Q9UHC6 1331 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms