RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 KCTD10Q9H3F6 313 aa10.84□□□□□ -0.67
NUP188-201ENST00000372577 UMODL1Q5DID0 1318 aa10.84□□□□□ -0.67
NUP188-201ENST00000372577 COL14A1Q05707 1796 aaKnown RBP10.84□□□□□ -0.67
NUP188-201ENST00000372577 SRRM3A6NNA2 597 aaPredicted RBP10.84□□□□□ -0.67
NUP188-201ENST00000372577 SUPT3HB4E1H0 165 aa10.84□□□□□ -0.67
NUP188-201ENST00000372577 ANKRD63C9JTQ0 380 aa10.84□□□□□ -0.67
NUP188-201ENST00000372577 GHRP10912 638 aa10.84□□□□□ -0.67
NUP188-201ENST00000372577 AKR1A1P14550 325 aa10.84□□□□□ -0.67
NUP188-201ENST00000372577 UBA1P22314 1058 aaKnown RBP10.84□□□□□ -0.67
NUP188-201ENST00000372577 MGAT5Q09328 741 aa10.84□□□□□ -0.67
NUP188-201ENST00000372577 PRPF39Q86UA1 669 aaKnown RBP10.84□□□□□ -0.67
NUP188-201ENST00000372577 LCA5Q86VQ0 697 aa10.84□□□□□ -0.67
NUP188-201ENST00000372577 TMEM161BQ8NDZ6 487 aa10.84□□□□□ -0.67
NUP188-201ENST00000372577 AGR3Q8TD06 166 aa10.84□□□□□ -0.67
NUP188-201ENST00000372577 ATXN2LQ8WWM7 1075 aaKnown RBP10.84□□□□□ -0.67
NUP188-201ENST00000372577 SEPT8Q92599 483 aa10.84□□□□□ -0.67
NUP188-201ENST00000372577 FBXO32Q969P5 355 aa10.84□□□□□ -0.67
NUP188-201ENST00000372577 SH3KBP1Q96B97 665 aa10.84□□□□□ -0.67
NUP188-201ENST00000372577 KLF6Q99612 283 aaPredicted RBP10.84□□□□□ -0.67
NUP188-201ENST00000372577 SIKE1Q9BRV8 207 aa10.84□□□□□ -0.67
NUP188-201ENST00000372577 TMEM106CQ9BVX2 250 aa10.84□□□□□ -0.67
NUP188-201ENST00000372577 GPR63Q9BZJ6 419 aa10.84□□□□□ -0.67
NUP188-201ENST00000372577 FBXO44Q9H4M3 255 aa10.84□□□□□ -0.67
NUP188-201ENST00000372577 LRRC4BQ9NT99 713 aa10.84□□□□□ -0.67
NUP188-201ENST00000372577 CARNS1A5YM72 827 aa10.84□□□□□ -0.67
NUP188-201ENST00000372577 SYCE1LA8MT33 242 aa10.84□□□□□ -0.67
NUP188-201ENST00000372577 CLASP2O75122 1294 aaKnown RBP10.84□□□□□ -0.67
NUP188-201ENST00000372577 MAFO75444 373 aaPredicted RBP10.84□□□□□ -0.67
NUP188-201ENST00000372577 PYGMP11217 842 aa10.84□□□□□ -0.67
NUP188-201ENST00000372577 CDH2P19022 906 aaPredicted RBP10.84□□□□□ -0.67
NUP188-201ENST00000372577 MFSD10Q14728 455 aa10.84□□□□□ -0.67
NUP188-201ENST00000372577 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.84□□□□□ -0.67
NUP188-201ENST00000372577 BAP1Q92560 729 aa10.84□□□□□ -0.67
NUP188-201ENST00000372577 RPRD1AQ96P16 312 aaPredicted RBP10.84□□□□□ -0.67
NUP188-201ENST00000372577 SNTG2Q9NY99 539 aa10.84□□□□□ -0.67
NUP188-201ENST00000372577 CD274Q9NZQ7 290 aa10.84□□□□□ -0.67
NUP188-201ENST00000372577 KIF17Q9P2E2 1029 aa10.84□□□□□ -0.67
NUP188-201ENST00000372577 RASSF10A6NK89 507 aa10.84□□□□□ -0.67
NUP188-201ENST00000372577 RHOBTB1O94844 696 aa10.84□□□□□ -0.67
NUP188-201ENST00000372577 CSPG5O95196 566 aa10.84□□□□□ -0.67
NUP188-201ENST00000372577 ADORA2AP29274 412 aa10.84□□□□□ -0.67
NUP188-201ENST00000372577 COPAP53621 1224 aa10.84□□□□□ -0.67
NUP188-201ENST00000372577 SOX10P56693 466 aa10.84□□□□□ -0.67
NUP188-201ENST00000372577 OCA2Q04671 838 aa10.84□□□□□ -0.67
NUP188-201ENST00000372577 CCDC15Q0P6D6 951 aa10.84□□□□□ -0.67
NUP188-201ENST00000372577 RRP1BQ14684 758 aaKnown RBP10.84□□□□□ -0.67
NUP188-201ENST00000372577 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.84□□□□□ -0.67
NUP188-201ENST00000372577 VAT1Q99536 393 aa10.84□□□□□ -0.67
NUP188-201ENST00000372577 OSMRQ99650 979 aa10.84□□□□□ -0.67
NUP188-201ENST00000372577 OSBPL1AQ9BXW6 950 aa10.84□□□□□ -0.67
NUP188-201ENST00000372577 CASS4Q9NQ75 786 aa10.84□□□□□ -0.67
NUP188-201ENST00000372577 MARCOQ9UEW3 520 aaPredicted RBP10.84□□□□□ -0.67
NUP188-201ENST00000372577 GOLGA8TH3BQL2 631 aa10.83□□□□□ -0.68
NUP188-201ENST00000372577 APOC4-APOC2K7ER74 178 aa10.83□□□□□ -0.68
NUP188-201ENST00000372577 STX7O15400 261 aaKnown RBP10.83□□□□□ -0.68
NUP188-201ENST00000372577 APOC2P02655 101 aa10.83□□□□□ -0.68
NUP188-201ENST00000372577 MPOP05164 745 aa10.83□□□□□ -0.68
NUP188-201ENST00000372577 RARAP10276 462 aa10.83□□□□□ -0.68
NUP188-201ENST00000372577 TSHRP16473 764 aa10.83□□□□□ -0.68
NUP188-201ENST00000372577 TKTL1P51854 596 aa10.83□□□□□ -0.68
NUP188-201ENST00000372577 SLC6A3Q01959 620 aa10.83□□□□□ -0.68
NUP188-201ENST00000372577 AMHR2Q16671 573 aa10.83□□□□□ -0.68
NUP188-201ENST00000372577 ARID3BQ8IVW6 561 aaPredicted RBP10.83□□□□□ -0.68
NUP188-201ENST00000372577 SUGP1Q8IWZ8 645 aaKnown RBP10.83□□□□□ -0.68
NUP188-201ENST00000372577 AFF4Q9UHB7 1163 aaKnown RBP10.83□□□□□ -0.68
NUP188-201ENST00000372577 LACTBL1A8MY62 500 aa10.83□□□□□ -0.68
NUP188-201ENST00000372577 HNRNPRO43390 633 aaKnown RBP10.83□□□□□ -0.68
NUP188-201ENST00000372577 RBP1P09455 135 aa10.83□□□□□ -0.68
NUP188-201ENST00000372577 VEGFAP15692 232 aaPredicted RBP10.83□□□□□ -0.68
NUP188-201ENST00000372577 PBX1P40424 430 aa10.83□□□□□ -0.68
NUP188-201ENST00000372577 KCNMA1Q12791 1236 aa10.83□□□□□ -0.68
NUP188-201ENST00000372577 TWF1Q12792 350 aa10.83□□□□□ -0.68
NUP188-201ENST00000372577 MED21Q13503 144 aa10.83□□□□□ -0.68
NUP188-201ENST00000372577 MDH1BQ5I0G3 518 aa10.83□□□□□ -0.68
NUP188-201ENST00000372577 CCDC60Q8IWA6 550 aaPredicted RBP10.83□□□□□ -0.68
NUP188-201ENST00000372577 FAM9CQ8IZT9 166 aa10.83□□□□□ -0.68
NUP188-201ENST00000372577 MREGQ8N565 214 aa10.83□□□□□ -0.68
NUP188-201ENST00000372577 SMARCD1Q96GM5 515 aa10.83□□□□□ -0.68
NUP188-201ENST00000372577 TMEM169Q96HH4 297 aa10.83□□□□□ -0.68
NUP188-201ENST00000372577 CCDC134Q9H6E4 229 aa10.83□□□□□ -0.68
NUP188-201ENST00000372577 SLC40A1Q9NP59 571 aa10.83□□□□□ -0.68
NUP188-201ENST00000372577 SETD4Q9NVD3 440 aa10.83□□□□□ -0.68
NUP188-201ENST00000372577 PRG3Q9Y2Y8 225 aaPredicted RBP10.83□□□□□ -0.68
NUP188-201ENST00000372577 SPATA31C2B4DYI2 1134 aa10.83□□□□□ -0.68
NUP188-201ENST00000372577 ZNF286BP0CG31 522 aa10.83□□□□□ -0.68
NUP188-201ENST00000372577 AKT1P31749 480 aa10.83□□□□□ -0.68
NUP188-201ENST00000372577 HSPA13P48723 471 aa10.83□□□□□ -0.68
NUP188-201ENST00000372577 PPP3CAQ08209 521 aa10.83□□□□□ -0.68
NUP188-201ENST00000372577 KCNA1Q09470 495 aa10.83□□□□□ -0.68
NUP188-201ENST00000372577 ORC1Q13415 861 aa10.83□□□□□ -0.68
NUP188-201ENST00000372577 SMAD1Q15797 465 aaKnown RBP10.83□□□□□ -0.68
NUP188-201ENST00000372577 CNGA3Q16281 694 aa10.83□□□□□ -0.68
NUP188-201ENST00000372577 C2CD6Q53TS8 623 aa10.83□□□□□ -0.68
NUP188-201ENST00000372577 PRKD2Q9BZL6 878 aa10.83□□□□□ -0.68
NUP188-201ENST00000372577 UBXN6Q9BZV1 441 aa10.83□□□□□ -0.68
NUP188-201ENST00000372577 LATS2Q9NRM7 1088 aa10.83□□□□□ -0.68
NUP188-201ENST00000372577 GGT7Q9UJ14 662 aa10.83□□□□□ -0.68
NUP188-201ENST00000372577 MOSPD1Q9UJG1 213 aa10.83□□□□□ -0.68
NUP188-201ENST00000372577 DISP2A7MBM2 1401 aa10.83□□□□□ -0.68
NUP188-201ENST00000372577 VIRMAQ69YN4 1812 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms