RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 UNC93AQ86WB7 457 aa21.46■■□□□ 1.03
VEGFA-204ENST00000372064 ZDHHC17Q8IUH5 632 aa21.46■■□□□ 1.03
VEGFA-204ENST00000372064 PLD5Q8N7P1 536 aa21.46■■□□□ 1.03
VEGFA-204ENST00000372064 FBF1Q8TES7 1133 aa21.46■■□□□ 1.03
VEGFA-204ENST00000372064 MZB1Q8WU39 189 aa21.46■■□□□ 1.03
VEGFA-204ENST00000372064 ADAM33Q9BZ11 813 aa21.46■■□□□ 1.03
VEGFA-204ENST00000372064 USP29Q9HBJ7 922 aa21.46■■□□□ 1.03
VEGFA-204ENST00000372064 CNTN3Q9P232 1028 aa21.46■■□□□ 1.03
VEGFA-204ENST00000372064 A0A1W2PPM1 405 aa21.45■■□□□ 1.03
VEGFA-204ENST00000372064 A6NJR5 290 aa21.45■■□□□ 1.03
VEGFA-204ENST00000372064 F2P00734 622 aa21.45■■□□□ 1.03
VEGFA-204ENST00000372064 DARSP14868 501 aaKnown RBP21.45■■□□□ 1.03
VEGFA-204ENST00000372064 TGM2P21980 687 aa21.45■■□□□ 1.03
VEGFA-204ENST00000372064 RPA3P35244 121 aaPredicted RBP21.45■■□□□ 1.03
VEGFA-204ENST00000372064 KRT81Q14533 505 aa21.45■■□□□ 1.03
VEGFA-204ENST00000372064 PCBP1Q15365 356 aaKnown RBP eCLIP21.45■■□□□ 1.034e-7■■□□□ 11.7
VEGFA-204ENST00000372064 SPRYD7Q5W111 196 aa21.45■■□□□ 1.03
VEGFA-204ENST00000372064 ARHGAP17Q68EM7 881 aa21.45■■□□□ 1.03
VEGFA-204ENST00000372064 CYB5D1Q6P9G0 228 aa21.45■■□□□ 1.03
VEGFA-204ENST00000372064 C4orf33Q8N1A6 199 aa21.45■■□□□ 1.03
VEGFA-204ENST00000372064 PQLC3Q8N755 202 aa21.45■■□□□ 1.03
VEGFA-204ENST00000372064 GBP7Q8N8V2 638 aaPredicted RBP21.45■■□□□ 1.03
VEGFA-204ENST00000372064 TRIM6Q9C030 488 aaPredicted RBP21.45■■□□□ 1.03
VEGFA-204ENST00000372064 NRCAMQ92823 1304 aa21.45■■□□□ 1.03
VEGFA-204ENST00000372064 SCN4AP35499 1836 aa21.45■■□□□ 1.03
VEGFA-204ENST00000372064 PAPSS1O43252 624 aaPredicted RBP21.45■■□□□ 1.02
VEGFA-204ENST00000372064 SOWAHAQ2M3V2 549 aa21.45■■□□□ 1.02
VEGFA-204ENST00000372064 C9orf57Q5W0N0 161 aa21.45■■□□□ 1.02
VEGFA-204ENST00000372064 RNF43Q68DV7 783 aa21.45■■□□□ 1.02
VEGFA-204ENST00000372064 SLC9A4Q6AI14 798 aa21.45■■□□□ 1.02
VEGFA-204ENST00000372064 C1orf228Q6PIY5 440 aa21.45■■□□□ 1.02
VEGFA-204ENST00000372064 FAM172AQ8WUF8 416 aa21.45■■□□□ 1.02
VEGFA-204ENST00000372064 PAFAH2Q99487 392 aa21.45■■□□□ 1.02
VEGFA-204ENST00000372064 PCDH18Q9HCL0 1135 aa21.45■■□□□ 1.02
VEGFA-204ENST00000372064 GRID1Q9ULK0 1009 aa21.45■■□□□ 1.02
VEGFA-204ENST00000372064 MDM4O15151 490 aa21.45■■□□□ 1.02
VEGFA-204ENST00000372064 CHADO15335 359 aa21.45■■□□□ 1.02
VEGFA-204ENST00000372064 UBOX5O94941 541 aa21.45■■□□□ 1.02
VEGFA-204ENST00000372064 SDC4P31431 198 aa21.45■■□□□ 1.02
VEGFA-204ENST00000372064 PDK4Q16654 411 aa21.45■■□□□ 1.02
VEGFA-204ENST00000372064 C7orf31Q8N865 590 aa21.45■■□□□ 1.02
VEGFA-204ENST00000372064 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.45■■□□□ 1.02
VEGFA-204ENST00000372064 TMEM40Q8WWA1 233 aa21.45■■□□□ 1.02
VEGFA-204ENST00000372064 DNAJB3Q8WWF6 145 aa21.45■■□□□ 1.02
VEGFA-204ENST00000372064 HESX1Q9UBX0 185 aa21.45■■□□□ 1.02
VEGFA-204ENST00000372064 ZNF487B1APH4 448 aa21.44■■□□□ 1.02
VEGFA-204ENST00000372064 BBS9Q3SYG4 887 aa21.44■■□□□ 1.02
VEGFA-204ENST00000372064 FAM133BQ5BKY9 247 aaKnown RBP21.44■■□□□ 1.02
VEGFA-204ENST00000372064 PALM2Q8IXS6 379 aa21.44■■□□□ 1.02
VEGFA-204ENST00000372064 DCAKDQ8WVC6 231 aa21.44■■□□□ 1.02
VEGFA-204ENST00000372064 FAF2Q96CS3 445 aa21.44■■□□□ 1.02
VEGFA-204ENST00000372064 NCAPGQ9BPX3 1015 aa21.44■■□□□ 1.02
VEGFA-204ENST00000372064 PITPNM3Q9BZ71 974 aa21.44■■□□□ 1.02
VEGFA-204ENST00000372064 KLK14Q9P0G3 267 aa21.44■■□□□ 1.02
VEGFA-204ENST00000372064 GNEQ9Y223 722 aaKnown RBP21.44■■□□□ 1.02
VEGFA-204ENST00000372064 STARD13Q9Y3M8 1113 aa21.44■■□□□ 1.02
VEGFA-204ENST00000372064 SMIM35A0A1B0GVV1 85 aa21.44■■□□□ 1.02
VEGFA-204ENST00000372064 SLC15A5A6NIM6 579 aa21.44■■□□□ 1.02
VEGFA-204ENST00000372064 A8MXQ7 604 aa21.44■■□□□ 1.02
VEGFA-204ENST00000372064 PIAS1O75925 651 aa21.44■■□□□ 1.02
VEGFA-204ENST00000372064 SNX16P57768 344 aa21.44■■□□□ 1.02
VEGFA-204ENST00000372064 CPA4Q9UI42 421 aa21.44■■□□□ 1.02
VEGFA-204ENST00000372064 MBLAC1A4D2B0 266 aaPredicted RBP21.43■■□□□ 1.02
VEGFA-204ENST00000372064 APOL1O14791 398 aa21.43■■□□□ 1.02
VEGFA-204ENST00000372064 CA9Q16790 459 aa21.43■■□□□ 1.02
VEGFA-204ENST00000372064 PAIP2Q9BPZ3 127 aaKnown RBP21.43■■□□□ 1.02
VEGFA-204ENST00000372064 ZNF670Q9BS34 389 aa21.43■■□□□ 1.02
VEGFA-204ENST00000372064 C11orf84Q9BUA3 381 aaPredicted RBP21.43■■□□□ 1.02
VEGFA-204ENST00000372064 SNRNP25Q9BV90 132 aaKnown RBP21.43■■□□□ 1.02
VEGFA-204ENST00000372064 RXFP1Q9HBX9 757 aa21.43■■□□□ 1.02
VEGFA-204ENST00000372064 PAK5Q9P286 719 aa21.43■■□□□ 1.02
VEGFA-204ENST00000372064 TEX264Q9Y6I9 313 aa21.43■■□□□ 1.02
VEGFA-204ENST00000372064 PDCD11Q14690 1871 aaKnown RBP21.43■■□□□ 1.02
VEGFA-204ENST00000372064 H7C0C1 242 aa21.43■■□□□ 1.02
VEGFA-204ENST00000372064 PDGFRBP09619 1106 aa21.43■■□□□ 1.02
VEGFA-204ENST00000372064 CA4P22748 312 aa21.43■■□□□ 1.02
VEGFA-204ENST00000372064 ATP5OP48047 213 aa21.43■■□□□ 1.02
VEGFA-204ENST00000372064 HDAC4P56524 1084 aa21.43■■□□□ 1.02
VEGFA-204ENST00000372064 SLC1A5Q15758 541 aa21.43■■□□□ 1.02
VEGFA-204ENST00000372064 IGDCC3Q8IVU1 814 aa21.43■■□□□ 1.02
VEGFA-204ENST00000372064 PCDH19Q8TAB3 1148 aa21.43■■□□□ 1.02
VEGFA-204ENST00000372064 PIN4Q9Y237 131 aaKnown RBP21.43■■□□□ 1.02
VEGFA-204ENST00000372064 BCLAF3A2AJT9 711 aaKnown RBP21.42■■□□□ 1.02
VEGFA-204ENST00000372064 CFAP69A5D8W1 941 aa21.42■■□□□ 1.02
VEGFA-204ENST00000372064 KRT4P19013 534 aa21.42■■□□□ 1.02
VEGFA-204ENST00000372064 TFE3P19532 575 aaPredicted RBP21.42■■□□□ 1.02
VEGFA-204ENST00000372064 RPL34P49207 117 aaKnown RBP21.42■■□□□ 1.02
VEGFA-204ENST00000372064 MGAT5Q09328 741 aa21.42■■□□□ 1.02
VEGFA-204ENST00000372064 BNIP1Q12981 228 aa21.42■■□□□ 1.02
VEGFA-204ENST00000372064 SYCP2LQ5T4T6 812 aa21.42■■□□□ 1.02
VEGFA-204ENST00000372064 CLEC4CQ8WTT0 213 aa21.42■■□□□ 1.02
VEGFA-204ENST00000372064 ZNF236Q9UL36 1845 aa21.42■■□□□ 1.02
VEGFA-204ENST00000372064 ZWINTO95229 277 aa21.42■■□□□ 1.02
VEGFA-204ENST00000372064 MAP3K6O95382 1288 aa21.42■■□□□ 1.02
VEGFA-204ENST00000372064 FGFR1P11362 822 aa21.42■■□□□ 1.02
VEGFA-204ENST00000372064 CCDC130P13994 396 aa21.42■■□□□ 1.02
VEGFA-204ENST00000372064 ATP2A2P16615 1042 aaKnown RBP21.42■■□□□ 1.02
VEGFA-204ENST00000372064 PTPN9P43378 593 aa21.42■■□□□ 1.02
VEGFA-204ENST00000372064 ZNF200P98182 395 aaPredicted RBP21.42■■□□□ 1.02
VEGFA-204ENST00000372064 MFSD10Q14728 455 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms