RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 DIS3LQ8TF46 1054 aaKnown RBP17.68■□□□□ 0.42
PTP4A1-201ENST00000370651 RXFP2Q8WXD0 754 aa17.68■□□□□ 0.42
PTP4A1-201ENST00000370651 ATP5BP06576 529 aaKnown RBP17.67■□□□□ 0.42
PTP4A1-201ENST00000370651 MAPTP10636 758 aaKnown RBP17.67■□□□□ 0.42
PTP4A1-201ENST00000370651 GEMP55040 296 aa17.67■□□□□ 0.42
PTP4A1-201ENST00000370651 ACCSLQ4AC99 568 aa17.67■□□□□ 0.42
PTP4A1-201ENST00000370651 NRDE2Q9H7Z3 1164 aa17.67■□□□□ 0.42
PTP4A1-201ENST00000370651 C2CD2Q9Y426 696 aa17.67■□□□□ 0.42
PTP4A1-201ENST00000370651 HEATR9A2RTY3 570 aa17.67■□□□□ 0.42
PTP4A1-201ENST00000370651 GAS2O43903 313 aaKnown RBP17.67■□□□□ 0.42
PTP4A1-201ENST00000370651 GCNT1Q02742 428 aa17.67■□□□□ 0.42
PTP4A1-201ENST00000370651 GPR162Q16538 588 aa17.67■□□□□ 0.42
PTP4A1-201ENST00000370651 AGKQ53H12 422 aa17.67■□□□□ 0.42
PTP4A1-201ENST00000370651 SGO1Q5FBB7 561 aa17.67■□□□□ 0.42
PTP4A1-201ENST00000370651 TMEM139Q8IV31 216 aa17.67■□□□□ 0.42
PTP4A1-201ENST00000370651 RMND5BQ96G75 393 aaPredicted RBP17.67■□□□□ 0.42
PTP4A1-201ENST00000370651 TBC1D10AQ9BXI6 508 aa17.67■□□□□ 0.42
PTP4A1-201ENST00000370651 DDIT4Q9NX09 232 aa17.67■□□□□ 0.42
PTP4A1-201ENST00000370651 BTBD7Q9P203 1132 aa17.67■□□□□ 0.42
PTP4A1-201ENST00000370651 ACTL7BQ9Y614 415 aa17.67■□□□□ 0.42
PTP4A1-201ENST00000370651 MAP2P11137 1827 aaKnown RBP17.67■□□□□ 0.42
PTP4A1-201ENST00000370651 CSPG5O95196 566 aa17.67■□□□□ 0.42
PTP4A1-201ENST00000370651 CHRM3P20309 590 aa17.67■□□□□ 0.42
PTP4A1-201ENST00000370651 RPA3P35244 121 aaPredicted RBP17.67■□□□□ 0.42
PTP4A1-201ENST00000370651 FAAP100Q0VG06 881 aa17.67■□□□□ 0.42
PTP4A1-201ENST00000370651 MMRN1Q13201 1228 aa17.67■□□□□ 0.42
PTP4A1-201ENST00000370651 PTRHD1Q6GMV3 140 aaKnown RBP17.67■□□□□ 0.42
PTP4A1-201ENST00000370651 TRAF7Q6Q0C0 670 aa17.67■□□□□ 0.42
PTP4A1-201ENST00000370651 LRRC55Q6ZSA7 311 aa17.67■□□□□ 0.42
PTP4A1-201ENST00000370651 BAP1Q92560 729 aa17.67■□□□□ 0.42
PTP4A1-201ENST00000370651 OTULINQ96BN8 352 aa17.67■□□□□ 0.42
PTP4A1-201ENST00000370651 ATG4CQ96DT6 458 aa17.67■□□□□ 0.42
PTP4A1-201ENST00000370651 DCUN1D1Q96GG9 259 aa17.67■□□□□ 0.42
PTP4A1-201ENST00000370651 ZNF333Q96JL9 665 aa17.67■□□□□ 0.42
PTP4A1-201ENST00000370651 BBS2Q9BXC9 721 aa17.67■□□□□ 0.42
PTP4A1-201ENST00000370651 KIAA1683Q9H0B3 1180 aa17.67■□□□□ 0.42
PTP4A1-201ENST00000370651 PCYOX1Q9UHG3 505 aa17.67■□□□□ 0.42
PTP4A1-201ENST00000370651 REXO2Q9Y3B8 237 aaKnown RBP17.67■□□□□ 0.42
PTP4A1-201ENST00000370651 TBC1D12O60347 775 aa17.67■□□□□ 0.42
PTP4A1-201ENST00000370651 DDX5P17844 614 aaKnown RBP17.67■□□□□ 0.42
PTP4A1-201ENST00000370651 PCSK1P29120 753 aa17.67■□□□□ 0.42
PTP4A1-201ENST00000370651 MYL6P60660 151 aa17.67■□□□□ 0.42
PTP4A1-201ENST00000370651 NFYCQ13952 458 aa17.67■□□□□ 0.42
PTP4A1-201ENST00000370651 C4orf19Q8IY42 314 aa17.67■□□□□ 0.42
PTP4A1-201ENST00000370651 ZNF606Q8WXB4 792 aa17.67■□□□□ 0.42
PTP4A1-201ENST00000370651 NEUROG2Q9H2A3 272 aa17.67■□□□□ 0.42
PTP4A1-201ENST00000370651 AP4E1Q9UPM8 1137 aa17.67■□□□□ 0.42
PTP4A1-201ENST00000370651 SMNDC1O75940 238 aaKnown RBP eCLIP17.66■□□□□ 0.425e-7■□□□□ 10
PTP4A1-201ENST00000370651 FCGR1AP12314 374 aa17.66■□□□□ 0.42
PTP4A1-201ENST00000370651 HNRNPH3P31942 346 aaKnown RBP17.66■□□□□ 0.42
PTP4A1-201ENST00000370651 NNMTP40261 264 aa17.66■□□□□ 0.42
PTP4A1-201ENST00000370651 DRG2P55039 364 aaKnown RBP17.66■□□□□ 0.42
PTP4A1-201ENST00000370651 DGKDQ16760 1214 aa17.66■□□□□ 0.42
PTP4A1-201ENST00000370651 AADACL2Q6P093 401 aa17.66■□□□□ 0.42
PTP4A1-201ENST00000370651 TRIM69Q86WT6 500 aa17.66■□□□□ 0.42
PTP4A1-201ENST00000370651 GMCL1Q96IK5 515 aa17.66■□□□□ 0.42
PTP4A1-201ENST00000370651 DPP3Q9NY33 737 aa17.66■□□□□ 0.42
PTP4A1-201ENST00000370651 AAR2Q9Y312 384 aaKnown RBP17.66■□□□□ 0.42
PTP4A1-201ENST00000370651 BTNL10A8MVZ5 291 aa17.66■□□□□ 0.42
PTP4A1-201ENST00000370651 NME5P56597 212 aa17.66■□□□□ 0.42
PTP4A1-201ENST00000370651 IQCKQ8N0W5 287 aa17.66■□□□□ 0.42
PTP4A1-201ENST00000370651 RBM46Q8TBY0 533 aaKnown RBP17.66■□□□□ 0.42
PTP4A1-201ENST00000370651 ACER1Q8TDN7 264 aa17.66■□□□□ 0.42
PTP4A1-201ENST00000370651 SH3KBP1Q96B97 665 aa17.66■□□□□ 0.42
PTP4A1-201ENST00000370651 SAC3D1A6NKF1 404 aa17.66■□□□□ 0.42
PTP4A1-201ENST00000370651 ZNF839A8K0R7 811 aa17.66■□□□□ 0.42
PTP4A1-201ENST00000370651 PTDSS1P48651 473 aaKnown RBP17.66■□□□□ 0.42
PTP4A1-201ENST00000370651 CBWD6Q4V339 395 aa17.66■□□□□ 0.42
PTP4A1-201ENST00000370651 CBWD3Q5JTY5 395 aa17.66■□□□□ 0.42
PTP4A1-201ENST00000370651 CBWD5Q5RIA9 395 aa17.66■□□□□ 0.42
PTP4A1-201ENST00000370651 ZFP1Q6P2D0 407 aa17.66■□□□□ 0.42
PTP4A1-201ENST00000370651 ZSWIM2Q8NEG5 633 aa17.66■□□□□ 0.42
PTP4A1-201ENST00000370651 OR6Y1Q8NGX8 325 aa17.66■□□□□ 0.42
PTP4A1-201ENST00000370651 GLMNQ92990 594 aa17.66■□□□□ 0.42
PTP4A1-201ENST00000370651 INPP4AQ96PE3 977 aaPredicted RBP17.66■□□□□ 0.42
PTP4A1-201ENST00000370651 KCNK4Q9NYG8 393 aa17.66■□□□□ 0.42
PTP4A1-201ENST00000370651 CDV3Q9UKY7 258 aaKnown RBP17.66■□□□□ 0.42
PTP4A1-201ENST00000370651 NR5A2O00482 541 aa17.66■□□□□ 0.42
PTP4A1-201ENST00000370651 UBDO15205 165 aa17.66■□□□□ 0.42
PTP4A1-201ENST00000370651 PRPF4O43172 522 aaKnown RBP eCLIP17.66■□□□□ 0.422e-10■■□□□ 12.1
PTP4A1-201ENST00000370651 GCLCP48506 637 aaPredicted RBP17.66■□□□□ 0.42
PTP4A1-201ENST00000370651 PRKAA1Q13131 559 aa17.66■□□□□ 0.42
PTP4A1-201ENST00000370651 C16orf72Q14CZ0 275 aa17.66■□□□□ 0.42
PTP4A1-201ENST00000370651 TBCELQ5QJ74 424 aa17.66■□□□□ 0.42
PTP4A1-201ENST00000370651 IL31Q6EBC2 164 aa17.66■□□□□ 0.42
PTP4A1-201ENST00000370651 ACOT1Q86TX2 421 aa17.66■□□□□ 0.42
PTP4A1-201ENST00000370651 OR6J1Q8NGC5 347 aa17.66■□□□□ 0.42
PTP4A1-201ENST00000370651 ZCWPW1Q9H0M4 648 aa17.66■□□□□ 0.42
PTP4A1-201ENST00000370651 POLIQ9UNA4 740 aa17.66■□□□□ 0.42
PTP4A1-201ENST00000370651 HMBSP08397 361 aa17.65■□□□□ 0.42
PTP4A1-201ENST00000370651 PBX1P40424 430 aa17.65■□□□□ 0.42
PTP4A1-201ENST00000370651 NFIAQ12857 509 aa17.65■□□□□ 0.42
PTP4A1-201ENST00000370651 APOL2Q9BQE5 337 aa17.65■□□□□ 0.42
PTP4A1-201ENST00000370651 GIMAP4Q9NUV9 329 aa17.65■□□□□ 0.42
PTP4A1-201ENST00000370651 ERAP1Q9NZ08 941 aa17.65■□□□□ 0.42
PTP4A1-201ENST00000370651 DIP2AQ14689 1571 aa17.65■□□□□ 0.42
PTP4A1-201ENST00000370651 PIK3C2BO00750 1634 aa17.65■□□□□ 0.42
PTP4A1-201ENST00000370651 PTPN11Q06124 597 aaPredicted RBP17.65■□□□□ 0.42
PTP4A1-201ENST00000370651 CSTF3Q12996 717 aaKnown RBP17.65■□□□□ 0.42
PTP4A1-201ENST00000370651 LAMC2Q13753 1193 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms