RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 SLCO6A1Q86UG4 719 aa16.37■□□□□ 0.21
SSR4-204ENST00000370087 DDX42Q86XP3 938 aaKnown RBP eCLIP16.37■□□□□ 0.21
SSR4-204ENST00000370087 GPD1LQ8N335 351 aa16.37■□□□□ 0.21
SSR4-204ENST00000370087 IPO4Q8TEX9 1081 aaKnown RBP16.37■□□□□ 0.21
SSR4-204ENST00000370087 ANKRD36BP1Q96IX9 119 aa16.37■□□□□ 0.21
SSR4-204ENST00000370087 B3GNT5Q9BYG0 378 aa16.37■□□□□ 0.21
SSR4-204ENST00000370087 CCSER2Q9H7U1 834 aa16.37■□□□□ 0.21
SSR4-204ENST00000370087 RAXQ9Y2V3 346 aa16.37■□□□□ 0.21
SSR4-204ENST00000370087 A0A1W2PQD8 194 aa16.36■□□□□ 0.21
SSR4-204ENST00000370087 CD2BP2O95400 341 aaKnown RBP16.36■□□□□ 0.21
SSR4-204ENST00000370087 IRF1P10914 325 aa16.36■□□□□ 0.21
SSR4-204ENST00000370087 GAP43P17677 238 aa16.36■□□□□ 0.21
SSR4-204ENST00000370087 NTSR1P30989 418 aa16.36■□□□□ 0.21
SSR4-204ENST00000370087 RDXP35241 583 aaKnown RBP16.36■□□□□ 0.21
SSR4-204ENST00000370087 GRIK2Q13002 908 aa16.36■□□□□ 0.21
SSR4-204ENST00000370087 ANO4Q32M45 955 aa16.36■□□□□ 0.21
SSR4-204ENST00000370087 PLEKHG6Q3KR16 790 aa16.36■□□□□ 0.21
SSR4-204ENST00000370087 TOGARAM2Q6ZUX3 1019 aa16.36■□□□□ 0.21
SSR4-204ENST00000370087 TRMT11Q7Z4G4 463 aaKnown RBP16.36■□□□□ 0.21
SSR4-204ENST00000370087 RABEPKQ7Z6M1 372 aa16.36■□□□□ 0.21
SSR4-204ENST00000370087 MARCH9Q86YJ5 346 aa16.36■□□□□ 0.21
SSR4-204ENST00000370087 SYCP3Q8IZU3 236 aa16.36■□□□□ 0.21
SSR4-204ENST00000370087 SCAMP5Q8TAC9 235 aa16.36■□□□□ 0.21
SSR4-204ENST00000370087 SLITRK1Q96PX8 696 aa16.36■□□□□ 0.21
SSR4-204ENST00000370087 MMS19Q96T76 1030 aa16.36■□□□□ 0.21
SSR4-204ENST00000370087 CCDC86Q9H6F5 360 aaKnown RBP16.36■□□□□ 0.21
SSR4-204ENST00000370087 SPHK2Q9NRA0 654 aa16.36■□□□□ 0.21
SSR4-204ENST00000370087 OLFML3Q9NRN5 406 aa16.36■□□□□ 0.21
SSR4-204ENST00000370087 EHD2Q9NZN4 543 aa16.36■□□□□ 0.21
SSR4-204ENST00000370087 TBC1D14Q9P2M4 693 aa16.36■□□□□ 0.21
SSR4-204ENST00000370087 DEC1Q9P2X7 70 aa16.36■□□□□ 0.21
SSR4-204ENST00000370087 KIF3AQ9Y496 699 aa16.36■□□□□ 0.21
SSR4-204ENST00000370087 TMEM131Q92545 1883 aa16.35■□□□□ 0.21
SSR4-204ENST00000370087 FRMD3A2A2Y4 597 aa16.35■□□□□ 0.21
SSR4-204ENST00000370087 PRRT4C9JH25 899 aa16.35■□□□□ 0.21
SSR4-204ENST00000370087 CBFA2T3O75081 653 aa16.35■□□□□ 0.21
SSR4-204ENST00000370087 CST3P01034 146 aaPredicted RBP16.35■□□□□ 0.21
SSR4-204ENST00000370087 TNNC2P02585 160 aa16.35■□□□□ 0.21
SSR4-204ENST00000370087 SYPP08247 313 aa16.35■□□□□ 0.21
SSR4-204ENST00000370087 PTPN1P18031 435 aaKnown RBP16.35■□□□□ 0.21
SSR4-204ENST00000370087 YWHAQP27348 245 aa16.35■□□□□ 0.21
SSR4-204ENST00000370087 GNL1P36915 607 aaPredicted RBP16.35■□□□□ 0.21
SSR4-204ENST00000370087 HNRNPDQ14103 355 aaKnown RBP16.35■□□□□ 0.21
SSR4-204ENST00000370087 KCNV2Q8TDN2 545 aa16.35■□□□□ 0.21
SSR4-204ENST00000370087 HNRNPLLQ8WVV9 542 aaKnown RBP16.35■□□□□ 0.21
SSR4-204ENST00000370087 HPS3Q969F9 1004 aa16.35■□□□□ 0.21
SSR4-204ENST00000370087 FBXO32Q969P5 355 aa16.35■□□□□ 0.21
SSR4-204ENST00000370087 P2RY11Q96G91 374 aa16.35■□□□□ 0.21
SSR4-204ENST00000370087 ZNF419Q96HQ0 510 aaPredicted RBP16.35■□□□□ 0.21
SSR4-204ENST00000370087 KCNK16Q96T55 309 aa16.35■□□□□ 0.21
SSR4-204ENST00000370087 ELOVL4Q9GZR5 314 aa16.35■□□□□ 0.21
SSR4-204ENST00000370087 IL21RQ9HBE5 538 aa16.35■□□□□ 0.21
SSR4-204ENST00000370087 STK17AQ9UEE5 414 aa16.35■□□□□ 0.21
SSR4-204ENST00000370087 CHORDC1Q9UHD1 332 aaPredicted RBP16.35■□□□□ 0.21
SSR4-204ENST00000370087 STARD13Q9Y3M8 1113 aa16.35■□□□□ 0.21
SSR4-204ENST00000370087 APC2O95996 2303 aa16.35■□□□□ 0.21
SSR4-204ENST00000370087 A0A087X0B3 334 aa16.34■□□□□ 0.21
SSR4-204ENST00000370087 GREM1O60565 184 aa16.34■□□□□ 0.21
SSR4-204ENST00000370087 EIF5BO60841 1220 aaKnown RBP16.34■□□□□ 0.21
SSR4-204ENST00000370087 IDEP14735 1019 aa16.34■□□□□ 0.21
SSR4-204ENST00000370087 HOXD13P35453 343 aa16.34■□□□□ 0.21
SSR4-204ENST00000370087 SLC14A1Q13336 389 aa16.34■□□□□ 0.21
SSR4-204ENST00000370087 HECTD3Q5T447 861 aa16.34■□□□□ 0.21
SSR4-204ENST00000370087 BTBD8Q5XKL5 378 aa16.34■□□□□ 0.21
SSR4-204ENST00000370087 TRAPPC11Q7Z392 1133 aa16.34■□□□□ 0.21
SSR4-204ENST00000370087 RGL4Q8IZJ4 473 aa16.34■□□□□ 0.21
SSR4-204ENST00000370087 NUP93Q8N1F7 819 aa16.34■□□□□ 0.21
SSR4-204ENST00000370087 OR6B3Q8NGW1 331 aa16.34■□□□□ 0.21
SSR4-204ENST00000370087 OTUB2Q96DC9 234 aa16.34■□□□□ 0.21
SSR4-204ENST00000370087 CRELD1Q96HD1 420 aa16.34■□□□□ 0.21
SSR4-204ENST00000370087 TMX3Q96JJ7 454 aa16.34■□□□□ 0.21
SSR4-204ENST00000370087 MRGPRX1Q96LB2 322 aa16.34■□□□□ 0.21
SSR4-204ENST00000370087 CLIC6Q96NY7 704 aa16.34■□□□□ 0.21
SSR4-204ENST00000370087 GABRG3Q99928 467 aa16.34■□□□□ 0.21
SSR4-204ENST00000370087 SNX25Q9H3E2 840 aa16.34■□□□□ 0.21
SSR4-204ENST00000370087 DNAJC17Q9NVM6 304 aaKnown RBP16.34■□□□□ 0.21
SSR4-204ENST00000370087 CACNA2D2Q9NY47 1150 aa16.34■□□□□ 0.21
SSR4-204ENST00000370087 GMIPQ9P107 970 aa16.34■□□□□ 0.21
SSR4-204ENST00000370087 FBXO2Q9UK22 296 aaPredicted RBP16.34■□□□□ 0.21
SSR4-204ENST00000370087 PCOLCE2Q9UKZ9 415 aa16.34■□□□□ 0.21
SSR4-204ENST00000370087 SH3BP1Q9Y3L3 701 aa16.34■□□□□ 0.21
SSR4-204ENST00000370087 PCDHB13Q9Y5F0 798 aa16.34■□□□□ 0.21
SSR4-204ENST00000370087 GTF3C3Q9Y5Q9 886 aa16.34■□□□□ 0.21
SSR4-204ENST00000370087 CLIC4Q9Y696 253 aa16.34■□□□□ 0.21
SSR4-204ENST00000370087 MYH10P35580 1976 aa16.33■□□□□ 0.21
SSR4-204ENST00000370087 WASH3PC4AMC7 463 aa16.33■□□□□ 0.2
SSR4-204ENST00000370087 TACC1O75410 805 aa16.33■□□□□ 0.2
SSR4-204ENST00000370087 BNC1Q01954 994 aa16.33■□□□□ 0.2
SSR4-204ENST00000370087 DUOXA2Q1HG44 320 aa16.33■□□□□ 0.2
SSR4-204ENST00000370087 GRAMD4Q6IC98 578 aa16.33■□□□□ 0.2
SSR4-204ENST00000370087 PAQR9Q6ZVX9 377 aa16.33■□□□□ 0.2
SSR4-204ENST00000370087 WDR49Q8IV35 697 aa16.33■□□□□ 0.2
SSR4-204ENST00000370087 CHPFQ8IZ52 775 aa16.33■□□□□ 0.2
SSR4-204ENST00000370087 SPRYD3Q8NCJ5 442 aa16.33■□□□□ 0.2
SSR4-204ENST00000370087 B3GALNT2Q8NCR0 500 aa16.33■□□□□ 0.2
SSR4-204ENST00000370087 LRIG1Q96JA1 1093 aa16.33■□□□□ 0.2
SSR4-204ENST00000370087 GZF1Q9H116 711 aaPredicted RBP16.33■□□□□ 0.2
SSR4-204ENST00000370087 TOR4AQ9NXH8 423 aa16.33■□□□□ 0.2
SSR4-204ENST00000370087 PCDHB9Q9Y5E1 797 aa16.33■□□□□ 0.2
SSR4-204ENST00000370087 NEDD8-MDP1E9PL57 170 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms