RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 WDR59Q6PJI9 974 aa16.32■□□□□ 0.2
PRPF38B-202ENST00000370022 TADA2BQ86TJ2 420 aa16.32■□□□□ 0.2
PRPF38B-202ENST00000370022 ZNF276Q8N554 614 aa16.32■□□□□ 0.2
PRPF38B-202ENST00000370022 TC2NQ8N9U0 490 aa16.32■□□□□ 0.2
PRPF38B-202ENST00000370022 CPA5Q8WXQ8 436 aa16.32■□□□□ 0.2
PRPF38B-202ENST00000370022 ING5Q8WYH8 240 aa16.32■□□□□ 0.2
PRPF38B-202ENST00000370022 GOLGA1Q92805 767 aa16.32■□□□□ 0.2
PRPF38B-202ENST00000370022 C18orf8Q96DM3 657 aa16.32■□□□□ 0.2
PRPF38B-202ENST00000370022 SLITRK6Q9H5Y7 841 aa16.32■□□□□ 0.2
PRPF38B-202ENST00000370022 NOTCH4Q99466 2003 aa16.32■□□□□ 0.2
PRPF38B-202ENST00000370022 SSU72P8A0A1W2PR75 194 aa16.31■□□□□ 0.2
PRPF38B-202ENST00000370022 DLL1O00548 723 aa16.31■□□□□ 0.2
PRPF38B-202ENST00000370022 ABL1P00519 1130 aa16.31■□□□□ 0.2
PRPF38B-202ENST00000370022 RALAP11233 206 aa16.31■□□□□ 0.2
PRPF38B-202ENST00000370022 GZMAP12544 262 aa16.31■□□□□ 0.2
PRPF38B-202ENST00000370022 BMP1P13497 986 aa16.31■□□□□ 0.2
PRPF38B-202ENST00000370022 YWHAGP61981 247 aaKnown RBP eCLIP16.31■□□□□ 0.2
PRPF38B-202ENST00000370022 MAPK8IP2Q13387 824 aaPredicted RBP16.31■□□□□ 0.2
PRPF38B-202ENST00000370022 HECTD3Q5T447 861 aa16.31■□□□□ 0.2
PRPF38B-202ENST00000370022 TOGARAM2Q6ZUX3 1019 aa16.31■□□□□ 0.2
PRPF38B-202ENST00000370022 PHF13Q86YI8 300 aaPredicted RBP16.31■□□□□ 0.2
PRPF38B-202ENST00000370022 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.31■□□□□ 0.2
PRPF38B-202ENST00000370022 ADHFE1Q8IWW8 467 aa16.31■□□□□ 0.2
PRPF38B-202ENST00000370022 SCUBE3Q8IX30 993 aa16.31■□□□□ 0.2
PRPF38B-202ENST00000370022 ZDHHC14Q8IZN3 488 aa16.31■□□□□ 0.2
PRPF38B-202ENST00000370022 SLC30A5Q8TAD4 765 aa16.31■□□□□ 0.2
PRPF38B-202ENST00000370022 PANX2Q96RD6 677 aa16.31■□□□□ 0.2
PRPF38B-202ENST00000370022 MYADMQ96S97 322 aa16.31■□□□□ 0.2
PRPF38B-202ENST00000370022 ARHGAP20Q9P2F6 1191 aa16.31■□□□□ 0.2
PRPF38B-202ENST00000370022 NAGPAQ9UK23 515 aa16.31■□□□□ 0.2
PRPF38B-202ENST00000370022 STRIP2Q9ULQ0 834 aa16.31■□□□□ 0.2
PRPF38B-202ENST00000370022 TRAV19A0A0A6YYK7 116 aa16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 A0A1W2PQH9 124 aa16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 PIK3R2O00459 728 aa16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 PAPSS1O43252 624 aaPredicted RBP16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 OAS1P00973 400 aaKnown RBP16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 ERBB2P04626 1255 aa16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 CALB1P05937 261 aa16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 GLI1P08151 1106 aa16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 SCNN1AP37088 669 aa16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 AVPR1AP37288 418 aa16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 EFHC1Q5JVL4 640 aa16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 TXNDC8Q6A555 127 aa16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 ACAD10Q6JQN1 1059 aa16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 KLHDC10Q6PID8 442 aa16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 BEND5Q7L4P6 421 aa16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 BHLHA9Q7RTU4 235 aa16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 SCD5Q86SK9 330 aa16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 CMTM8Q8IZV2 173 aa16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 OLIG1Q8TAK6 271 aa16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 ANP32BQ92688 251 aaKnown RBP16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 MCRS1Q96EZ8 462 aa16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 RPGRIP1Q96KN7 1286 aa16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 SLC46A2Q9BY10 475 aa16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 ABCC13Q9NSE7 274 aa16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 ASNSD1Q9NWL6 643 aa16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 WDR35Q9P2L0 1181 aa16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 YJEFN3A6XGL0 299 aa16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 C2CD4DB7Z1M9 353 aa16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 LOC730098B7Z3J9 87 aa16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 E7ENQ6 273 aa16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 DDX3XO00571 662 aaKnown RBP eCLIP16.3■□□□□ 0.25e-9■□□□□ 8.9
PRPF38B-202ENST00000370022 NRG2O14511 850 aaPredicted RBP16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 TLR5O60602 858 aa16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 OLFM2O95897 454 aa16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 HDCP19113 662 aa16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 C1QBPQ07021 282 aaKnown RBP16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 GOLGA8FQ08AF8 430 aa16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 GOLGA8DPQ0D2H9 430 aa16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 STXBP5Q5T5C0 1151 aa16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 BSPRYQ5W0U4 402 aa16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 BTBD8Q5XKL5 378 aa16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 MTSS1LQ765P7 747 aa16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 MAB21L3Q8N8X9 362 aa16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 ZSCAN18Q8TBC5 510 aaPredicted RBP16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 SMARCD2Q92925 531 aa16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 E2F7Q96AV8 911 aa16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 VCPIP1Q96JH7 1222 aa16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 ASB16Q96NS5 453 aa16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 DEF6Q9H4E7 631 aa16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 NMUR1Q9HB89 426 aa16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 TRPV4Q9HBA0 871 aa16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 TRPC7Q9HCX4 862 aa16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 OLA1Q9NTK5 396 aaKnown RBP16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 ADAM22Q9P0K1 906 aa16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 ADAMTS1Q9UHI8 967 aa16.3■□□□□ 0.2
PRPF38B-202ENST00000370022 C2orf78A6NCI8 922 aa16.29■□□□□ 0.2
PRPF38B-202ENST00000370022 RTN2O75298 545 aa16.29■□□□□ 0.2
PRPF38B-202ENST00000370022 LTFP02788 710 aa16.29■□□□□ 0.2
PRPF38B-202ENST00000370022 PLEKP08567 350 aaPredicted RBP16.29■□□□□ 0.2
PRPF38B-202ENST00000370022 RARGP13631 454 aa16.29■□□□□ 0.2
PRPF38B-202ENST00000370022 ATP5C1P36542 298 aaKnown RBP16.29■□□□□ 0.2
PRPF38B-202ENST00000370022 GSCP56915 257 aaPredicted RBP16.29■□□□□ 0.2
PRPF38B-202ENST00000370022 GSDMDP57764 484 aa16.29■□□□□ 0.2
PRPF38B-202ENST00000370022 SLC6A3Q01959 620 aa16.29■□□□□ 0.2
PRPF38B-202ENST00000370022 ZP2Q05996 745 aa16.29■□□□□ 0.2
PRPF38B-202ENST00000370022 ZNF268Q14587 947 aaPredicted RBP16.29■□□□□ 0.2
PRPF38B-202ENST00000370022 TJAP1Q5JTD0 557 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms