RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 C4orf19Q8IY42 314 aa12.78□□□□□ -0.36
PHGDH-201ENST00000369407 KCTD6Q8NC69 237 aa12.78□□□□□ -0.36
PHGDH-201ENST00000369407 PPP1R14CQ8TAE6 165 aa12.78□□□□□ -0.36
PHGDH-201ENST00000369407 FAM172AQ8WUF8 416 aa12.78□□□□□ -0.36
PHGDH-201ENST00000369407 TFAP2BQ92481 460 aa12.78□□□□□ -0.36
PHGDH-201ENST00000369407 FAF2Q96CS3 445 aa12.78□□□□□ -0.36
PHGDH-201ENST00000369407 RAB6BQ9NRW1 208 aa12.78□□□□□ -0.36
PHGDH-201ENST00000369407 SEPT9Q9UHD8 586 aaPredicted RBP12.78□□□□□ -0.36
PHGDH-201ENST00000369407 TMX2Q9Y320 296 aa12.78□□□□□ -0.36
PHGDH-201ENST00000369407 E7ESA3 106 aa12.78□□□□□ -0.36
PHGDH-201ENST00000369407 LRCH4O75427 683 aa12.78□□□□□ -0.36
PHGDH-201ENST00000369407 IMPDH2P12268 514 aa12.78□□□□□ -0.36
PHGDH-201ENST00000369407 VCLP18206 1134 aa12.78□□□□□ -0.36
PHGDH-201ENST00000369407 SNRPFP62306 86 aaKnown RBP12.78□□□□□ -0.36
PHGDH-201ENST00000369407 CC2D2BQ6DHV5 1058 aa12.78□□□□□ -0.36
PHGDH-201ENST00000369407 TRIM72Q6ZMU5 477 aa12.78□□□□□ -0.36
PHGDH-201ENST00000369407 HPS6Q86YV9 775 aa12.78□□□□□ -0.36
PHGDH-201ENST00000369407 NDUFAF2Q8N183 169 aa12.78□□□□□ -0.36
PHGDH-201ENST00000369407 TTLL6Q8N841 843 aa12.78□□□□□ -0.36
PHGDH-201ENST00000369407 VCPIP1Q96JH7 1222 aa12.78□□□□□ -0.36
PHGDH-201ENST00000369407 HBS1LQ9Y450 684 aaKnown RBP12.78□□□□□ -0.36
PHGDH-201ENST00000369407 ZNF536O15090 1300 aa12.78□□□□□ -0.36
PHGDH-201ENST00000369407 CAPN8A6NHC0 703 aa12.77□□□□□ -0.36
PHGDH-201ENST00000369407 EXTL3O43909 919 aa12.77□□□□□ -0.36
PHGDH-201ENST00000369407 ZC3H11AO75152 810 aaKnown RBP eCLIP12.77□□□□□ -0.36
PHGDH-201ENST00000369407 SUPT3HO75486 399 aa12.77□□□□□ -0.36
PHGDH-201ENST00000369407 ATP6V1B1P15313 513 aa12.77□□□□□ -0.36
PHGDH-201ENST00000369407 CD1EP15812 388 aa12.77□□□□□ -0.36
PHGDH-201ENST00000369407 CPOXP36551 454 aa12.77□□□□□ -0.36
PHGDH-201ENST00000369407 ATXN3P54252 364 aaPredicted RBP12.77□□□□□ -0.36
PHGDH-201ENST00000369407 MPP3Q13368 585 aa12.77□□□□□ -0.36
PHGDH-201ENST00000369407 TMED1Q13445 227 aa12.77□□□□□ -0.36
PHGDH-201ENST00000369407 CCNIQ14094 377 aa12.77□□□□□ -0.36
PHGDH-201ENST00000369407 MTERF2Q49AM1 385 aa12.77□□□□□ -0.36
PHGDH-201ENST00000369407 SWSAP1Q6NVH7 229 aa12.77□□□□□ -0.36
PHGDH-201ENST00000369407 TRMT10BQ6PF06 316 aaKnown RBP12.77□□□□□ -0.36
PHGDH-201ENST00000369407 ARHGAP18Q8N392 663 aa12.77□□□□□ -0.36
PHGDH-201ENST00000369407 TARS2Q9BW92 718 aaKnown RBP12.77□□□□□ -0.36
PHGDH-201ENST00000369407 POLR3FQ9H1D9 316 aaPredicted RBP12.77□□□□□ -0.36
PHGDH-201ENST00000369407 STAM2O75886 525 aa12.77□□□□□ -0.37
PHGDH-201ENST00000369407 HNRNPCP07910 306 aaKnown RBP eCLIP12.77□□□□□ -0.37
PHGDH-201ENST00000369407 RAG1P15918 1043 aa12.77□□□□□ -0.37
PHGDH-201ENST00000369407 KCNA4P22459 653 aa12.77□□□□□ -0.37
PHGDH-201ENST00000369407 KDELR1P24390 212 aa12.77□□□□□ -0.37
PHGDH-201ENST00000369407 MSX2P35548 267 aaPredicted RBP12.77□□□□□ -0.37
PHGDH-201ENST00000369407 RPL10AP62906 217 aaKnown RBP12.77□□□□□ -0.37
PHGDH-201ENST00000369407 BTKQ06187 659 aa12.77□□□□□ -0.37
PHGDH-201ENST00000369407 GK3PQ14409 553 aa12.77□□□□□ -0.37
PHGDH-201ENST00000369407 PDK3Q15120 406 aa12.77□□□□□ -0.37
PHGDH-201ENST00000369407 DNAL1Q4LDG9 190 aa12.77□□□□□ -0.37
PHGDH-201ENST00000369407 RABGAP1LQ5R372 815 aa12.77□□□□□ -0.37
PHGDH-201ENST00000369407 SH3PXD2AQ5TCZ1 1133 aa12.77□□□□□ -0.37
PHGDH-201ENST00000369407 ACAD11Q709F0 780 aa12.77□□□□□ -0.37
PHGDH-201ENST00000369407 SLC26A11Q86WA9 606 aa12.77□□□□□ -0.37
PHGDH-201ENST00000369407 SEPT12Q8IYM1 358 aa12.77□□□□□ -0.37
PHGDH-201ENST00000369407 UNC5BQ8IZJ1 945 aa12.77□□□□□ -0.37
PHGDH-201ENST00000369407 XPNPEP1Q9NQW7 623 aa12.77□□□□□ -0.37
PHGDH-201ENST00000369407 SOX13Q9UN79 622 aa12.77□□□□□ -0.37
PHGDH-201ENST00000369407 UBIAD1Q9Y5Z9 338 aa12.77□□□□□ -0.37
PHGDH-201ENST00000369407 MAD1L1Q9Y6D9 718 aa12.77□□□□□ -0.37
PHGDH-201ENST00000369407 RFPL1O75677 317 aa12.77□□□□□ -0.37
PHGDH-201ENST00000369407 FAM200BP0CF97 657 aa12.77□□□□□ -0.37
PHGDH-201ENST00000369407 CSH1P0DML2 217 aa12.77□□□□□ -0.37
PHGDH-201ENST00000369407 CSH2P0DML3 217 aa12.77□□□□□ -0.37
PHGDH-201ENST00000369407 CD19P15391 556 aa12.77□□□□□ -0.37
PHGDH-201ENST00000369407 MAGEA8P43361 318 aa12.77□□□□□ -0.37
PHGDH-201ENST00000369407 PABPC1LQ4VXU2 614 aaKnown RBP12.77□□□□□ -0.37
PHGDH-201ENST00000369407 TEX44Q53QW1 395 aa12.77□□□□□ -0.37
PHGDH-201ENST00000369407 TTC39BQ5VTQ0 682 aaPredicted RBP12.77□□□□□ -0.37
PHGDH-201ENST00000369407 DPY19L2Q6NUT2 758 aa12.77□□□□□ -0.37
PHGDH-201ENST00000369407 DPH6Q7L8W6 267 aa12.77□□□□□ -0.37
PHGDH-201ENST00000369407 SESTD1Q86VW0 696 aa12.77□□□□□ -0.37
PHGDH-201ENST00000369407 PIH1D1Q9NWS0 290 aaKnown RBP12.77□□□□□ -0.37
PHGDH-201ENST00000369407 ATXN10Q9UBB4 475 aa12.77□□□□□ -0.37
PHGDH-201ENST00000369407 ZC3H7BQ9UGR2 993 aaKnown RBP12.77□□□□□ -0.37
PHGDH-201ENST00000369407 DNAJC16Q9Y2G8 782 aa12.77□□□□□ -0.37
PHGDH-201ENST00000369407 TEX264Q9Y6I9 313 aa12.77□□□□□ -0.37
PHGDH-201ENST00000369407 AK5Q9Y6K8 562 aa12.77□□□□□ -0.37
PHGDH-201ENST00000369407 SPDYE2BA6NHP3 402 aa12.76□□□□□ -0.37
PHGDH-201ENST00000369407 WDR64B1ANS9 1081 aa12.76□□□□□ -0.37
PHGDH-201ENST00000369407 H7C0C1 242 aa12.76□□□□□ -0.37
PHGDH-201ENST00000369407 POLRMTO00411 1230 aaKnown RBP12.76□□□□□ -0.37
PHGDH-201ENST00000369407 SPDYE6P0CI01 402 aa12.76□□□□□ -0.37
PHGDH-201ENST00000369407 UQCRBP14927 111 aa12.76□□□□□ -0.37
PHGDH-201ENST00000369407 ATP5OP48047 213 aa12.76□□□□□ -0.37
PHGDH-201ENST00000369407 RPS6P62753 249 aaKnown RBP12.76□□□□□ -0.37
PHGDH-201ENST00000369407 SLC25A11Q02978 314 aaKnown RBP12.76□□□□□ -0.37
PHGDH-201ENST00000369407 PSMD6Q15008 389 aa12.76□□□□□ -0.37
PHGDH-201ENST00000369407 SPDYE2Q495Y8 402 aa12.76□□□□□ -0.37
PHGDH-201ENST00000369407 PPP6R3Q5H9R7 873 aaPredicted RBP12.76□□□□□ -0.37
PHGDH-201ENST00000369407 DACT2Q5SW24 774 aa12.76□□□□□ -0.37
PHGDH-201ENST00000369407 ATG16L1Q676U5 607 aa12.76□□□□□ -0.37
PHGDH-201ENST00000369407 DENND1BQ6P3S1 775 aa12.76□□□□□ -0.37
PHGDH-201ENST00000369407 SYTL5Q8TDW5 730 aaPredicted RBP12.76□□□□□ -0.37
PHGDH-201ENST00000369407 CLEC4DQ8WXI8 215 aa12.76□□□□□ -0.37
PHGDH-201ENST00000369407 NCSTNQ92542 709 aa12.76□□□□□ -0.37
PHGDH-201ENST00000369407 KLHL4Q9C0H6 718 aa12.76□□□□□ -0.37
PHGDH-201ENST00000369407 FETUBQ9UGM5 382 aa12.76□□□□□ -0.37
PHGDH-201ENST00000369407 TTLL3Q9Y4R7 772 aa12.76□□□□□ -0.37
PHGDH-201ENST00000369407 COMMD3-BMI1R4GMX3 469 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms