RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 MTFR1Q15390 333 aa18.74■□□□□ 0.59
SNX27-202ENST00000368841 SLC40A1Q9NP59 571 aa18.74■□□□□ 0.59
SNX27-202ENST00000368841 DNAJC16Q9Y2G8 782 aa18.74■□□□□ 0.59
SNX27-202ENST00000368841 MGAT4DA6NG13 374 aa18.73■□□□□ 0.59
SNX27-202ENST00000368841 KPNA1P52294 538 aaPredicted RBP18.73■□□□□ 0.59
SNX27-202ENST00000368841 OTUD4Q01804 1114 aaKnown RBP18.73■□□□□ 0.59
SNX27-202ENST00000368841 DSG1Q02413 1049 aa18.73■□□□□ 0.59
SNX27-202ENST00000368841 ITPK1Q13572 414 aa18.73■□□□□ 0.59
SNX27-202ENST00000368841 WLSQ5T9L3 541 aa18.73■□□□□ 0.59
SNX27-202ENST00000368841 GATAD2AQ86YP4 633 aa18.73■□□□□ 0.59
SNX27-202ENST00000368841 NYAP2Q9P242 653 aa18.73■□□□□ 0.59
SNX27-202ENST00000368841 TUBE1Q9UJT0 475 aa18.73■□□□□ 0.59
SNX27-202ENST00000368841 SOX13Q9UN79 622 aa18.73■□□□□ 0.59
SNX27-202ENST00000368841 ANXA9O76027 345 aa18.73■□□□□ 0.59
SNX27-202ENST00000368841 KRT75O95678 551 aa18.73■□□□□ 0.59
SNX27-202ENST00000368841 GCLCP48506 637 aaPredicted RBP18.73■□□□□ 0.59
SNX27-202ENST00000368841 FIG4Q92562 907 aa18.73■□□□□ 0.59
SNX27-202ENST00000368841 NDEL1Q9GZM8 345 aa18.73■□□□□ 0.59
SNX27-202ENST00000368841 PRDM15P57071 1507 aaPredicted RBP18.73■□□□□ 0.59
SNX27-202ENST00000368841 ATP6V1C1P21283 382 aa18.73■□□□□ 0.59
SNX27-202ENST00000368841 LINC00523Q86TU6 105 aa18.73■□□□□ 0.59
SNX27-202ENST00000368841 CRAMP1Q96RY5 1269 aa18.73■□□□□ 0.59
SNX27-202ENST00000368841 PDS5AQ29RF7 1337 aaKnown RBP18.73■□□□□ 0.59
SNX27-202ENST00000368841 TRPC5OSA6NMA1 111 aa18.73■□□□□ 0.59
SNX27-202ENST00000368841 TMEM253P0C7T8 217 aa18.73■□□□□ 0.59
SNX27-202ENST00000368841 RRM2P31350 389 aa18.73■□□□□ 0.59
SNX27-202ENST00000368841 DET1Q7L5Y6 550 aa18.73■□□□□ 0.59
SNX27-202ENST00000368841 PRUNE1Q86TP1 453 aa18.73■□□□□ 0.59
SNX27-202ENST00000368841 BLOC1S6Q9UL45 172 aa18.73■□□□□ 0.59
SNX27-202ENST00000368841 GPR182O15218 404 aa18.73■□□□□ 0.59
SNX27-202ENST00000368841 SLC25A27O95847 323 aa18.73■□□□□ 0.59
SNX27-202ENST00000368841 NUDT14O95848 222 aa18.73■□□□□ 0.59
SNX27-202ENST00000368841 TYW3Q6IPR3 259 aaKnown RBP18.73■□□□□ 0.59
SNX27-202ENST00000368841 MKNK1Q9BUB5 465 aa18.73■□□□□ 0.59
SNX27-202ENST00000368841 STN1Q9H668 368 aaKnown RBP18.73■□□□□ 0.59
SNX27-202ENST00000368841 SETD4Q9NVD3 440 aa18.73■□□□□ 0.59
SNX27-202ENST00000368841 CD44P16070 742 aaKnown RBP18.72■□□□□ 0.59
SNX27-202ENST00000368841 RGS2P41220 211 aa18.72■□□□□ 0.59
SNX27-202ENST00000368841 CCNG1P51959 295 aa18.72■□□□□ 0.59
SNX27-202ENST00000368841 CENPCQ03188 943 aa18.72■□□□□ 0.59
SNX27-202ENST00000368841 AASDHQ4L235 1098 aaPredicted RBP18.72■□□□□ 0.59
SNX27-202ENST00000368841 FAM151AQ8WW52 585 aa18.72■□□□□ 0.59
SNX27-202ENST00000368841 ILKAPQ9H0C8 392 aaPredicted RBP18.72■□□□□ 0.59
SNX27-202ENST00000368841 RRAGCQ9HB90 399 aa18.72■□□□□ 0.59
SNX27-202ENST00000368841 SPATA31E1Q6ZUB1 1445 aa18.72■□□□□ 0.59
SNX27-202ENST00000368841 CCDC92Q53HC0 331 aaPredicted RBP18.72■□□□□ 0.59
SNX27-202ENST00000368841 DGKKQ5KSL6 1271 aa18.72■□□□□ 0.59
SNX27-202ENST00000368841 KRT77Q7Z794 578 aa18.72■□□□□ 0.59
SNX27-202ENST00000368841 REXO1L1PQ8IX06 675 aa18.72■□□□□ 0.59
SNX27-202ENST00000368841 SEPHS2Q99611 448 aa18.72■□□□□ 0.59
SNX27-202ENST00000368841 CTDNEP1O95476 244 aa18.72■□□□□ 0.59
SNX27-202ENST00000368841 RHBGQ9H310 441 aa18.72■□□□□ 0.59
SNX27-202ENST00000368841 TMEM150BA6NC51 233 aa18.72■□□□□ 0.59
SNX27-202ENST00000368841 FAM25AB3EWG3 89 aa18.72■□□□□ 0.59
SNX27-202ENST00000368841 FAM25CB3EWG5 89 aa18.72■□□□□ 0.59
SNX27-202ENST00000368841 FAM25GB3EWG6 89 aa18.72■□□□□ 0.59
SNX27-202ENST00000368841 CXCL8P10145 99 aa18.72■□□□□ 0.59
SNX27-202ENST00000368841 SERPINB8P50452 374 aa18.72■□□□□ 0.59
SNX27-202ENST00000368841 NCKAP1LP55160 1127 aa18.72■□□□□ 0.59
SNX27-202ENST00000368841 AGBL2Q5U5Z8 902 aa18.72■□□□□ 0.59
SNX27-202ENST00000368841 POLG2Q9UHN1 485 aa18.72■□□□□ 0.59
SNX27-202ENST00000368841 HPS5Q9UPZ3 1129 aa18.72■□□□□ 0.59
SNX27-202ENST00000368841 SAC3D1A6NKF1 404 aa18.72■□□□□ 0.59
SNX27-202ENST00000368841 H7C4K7 107 aa18.72■□□□□ 0.59
SNX27-202ENST00000368841 KRT16P08779 473 aa18.72■□□□□ 0.59
SNX27-202ENST00000368841 SLC2A4P14672 509 aa18.72■□□□□ 0.59
SNX27-202ENST00000368841 YWHAQP27348 245 aa18.72■□□□□ 0.59
SNX27-202ENST00000368841 RPL10AP62906 217 aaKnown RBP18.72■□□□□ 0.59
SNX27-202ENST00000368841 BCL2L14Q9BZR8 327 aa18.72■□□□□ 0.59
SNX27-202ENST00000368841 CLPBQ9H078 707 aa18.72■□□□□ 0.59
SNX27-202ENST00000368841 USP18Q9UMW8 372 aa18.72■□□□□ 0.59
SNX27-202ENST00000368841 PCDHGA4Q9Y5G9 962 aa18.72■□□□□ 0.59
SNX27-202ENST00000368841 LRRC8DQ7L1W4 858 aa18.72■□□□□ 0.59
SNX27-202ENST00000368841 TRAPPC11Q7Z392 1133 aa18.72■□□□□ 0.59
SNX27-202ENST00000368841 ARHGEF3Q9NR81 526 aa18.72■□□□□ 0.59
SNX27-202ENST00000368841 RRN3P2A6NIE6 340 aa18.71■□□□□ 0.59
SNX27-202ENST00000368841 KLHL18O94889 574 aa18.71■□□□□ 0.59
SNX27-202ENST00000368841 GARTP22102 1010 aa18.71■□□□□ 0.59
SNX27-202ENST00000368841 KCTD19Q17RG1 926 aaPredicted RBP18.71■□□□□ 0.59
SNX27-202ENST00000368841 MRPS31Q92665 395 aaKnown RBP18.71■□□□□ 0.59
SNX27-202ENST00000368841 TADA1Q96BN2 335 aa18.71■□□□□ 0.59
SNX27-202ENST00000368841 KCTD14Q9BQ13 255 aaPredicted RBP18.71■□□□□ 0.59
SNX27-202ENST00000368841 OSGEPQ9NPF4 335 aa18.71■□□□□ 0.59
SNX27-202ENST00000368841 AAASQ9NRG9 546 aa18.71■□□□□ 0.59
SNX27-202ENST00000368841 SH3BP4Q9P0V3 963 aa18.71■□□□□ 0.59
SNX27-202ENST00000368841 FAM86B2P0C5J1 330 aa18.71■□□□□ 0.59
SNX27-202ENST00000368841 SERPINB1P30740 379 aa18.71■□□□□ 0.59
SNX27-202ENST00000368841 GUCA1AP43080 201 aaPredicted RBP18.71■□□□□ 0.59
SNX27-202ENST00000368841 GRB10Q13322 594 aa18.71■□□□□ 0.59
SNX27-202ENST00000368841 TMEM132BQ14DG7 1078 aa18.71■□□□□ 0.59
SNX27-202ENST00000368841 ZNF438Q7Z4V0 828 aa18.71■□□□□ 0.59
SNX27-202ENST00000368841 NECAB2Q7Z6G3 386 aa18.71■□□□□ 0.59
SNX27-202ENST00000368841 DNAJB3Q8WWF6 145 aa18.71■□□□□ 0.59
SNX27-202ENST00000368841 ATXN3LQ9H3M9 355 aa18.71■□□□□ 0.59
SNX27-202ENST00000368841 PARVBQ9HBI1 364 aa18.71■□□□□ 0.59
SNX27-202ENST00000368841 ZNF284Q2VY69 593 aa18.71■□□□□ 0.59
SNX27-202ENST00000368841 CHST13Q8NET6 341 aa18.71■□□□□ 0.59
SNX27-202ENST00000368841 KRCC1Q9NPI7 259 aaPredicted RBP18.71■□□□□ 0.59
SNX27-202ENST00000368841 A0A087WZ62 844 aa18.71■□□□□ 0.59
SNX27-202ENST00000368841 TCHHL1Q5QJ38 904 aaPredicted RBP18.71■□□□□ 0.59
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