RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 M0QYV0 167 aa19.48■□□□□ 0.71
CHTOP-202ENST00000368687 CYP26A1O43174 497 aa19.48■□□□□ 0.71
CHTOP-202ENST00000368687 COCHO43405 550 aa19.48■□□□□ 0.71
CHTOP-202ENST00000368687 GNA15P30679 374 aa19.48■□□□□ 0.71
CHTOP-202ENST00000368687 IFNAR2P48551 515 aa19.48■□□□□ 0.71
CHTOP-202ENST00000368687 BPIFB4P59827 614 aa19.48■□□□□ 0.71
CHTOP-202ENST00000368687 NHLH1Q02575 133 aa19.48■□□□□ 0.71
CHTOP-202ENST00000368687 SIX6OS1Q8N1H7 587 aa19.48■□□□□ 0.71
CHTOP-202ENST00000368687 CPA6Q8N4T0 437 aa19.48■□□□□ 0.71
CHTOP-202ENST00000368687 HSFY1Q96LI6 401 aa19.48■□□□□ 0.71
CHTOP-202ENST00000368687 IER2Q9BTL4 223 aa19.48■□□□□ 0.71
CHTOP-202ENST00000368687 PLCB1Q9NQ66 1216 aa19.48■□□□□ 0.71
CHTOP-202ENST00000368687 CNGB3Q9NQW8 809 aa19.48■□□□□ 0.71
CHTOP-202ENST00000368687 GKN1Q9NS71 199 aa19.48■□□□□ 0.71
CHTOP-202ENST00000368687 DUS2Q9NX74 493 aaKnown RBP19.48■□□□□ 0.71
CHTOP-202ENST00000368687 TAB2Q9NYJ8 693 aa19.48■□□□□ 0.71
CHTOP-202ENST00000368687 TBC1D14Q9P2M4 693 aa19.48■□□□□ 0.71
CHTOP-202ENST00000368687 LIMA1Q9UHB6 759 aaKnown RBP19.48■□□□□ 0.71
CHTOP-202ENST00000368687 CPQQ9Y646 472 aa19.48■□□□□ 0.71
CHTOP-202ENST00000368687 E2F8A0AVK6 867 aa19.47■□□□□ 0.71
CHTOP-202ENST00000368687 LRRC10BA6NIK2 292 aa19.47■□□□□ 0.71
CHTOP-202ENST00000368687 RNF225M0QZC1 329 aaPredicted RBP19.47■□□□□ 0.71
CHTOP-202ENST00000368687 LEFTY2O00292 366 aa19.47■□□□□ 0.71
CHTOP-202ENST00000368687 ZBED1O96006 694 aa19.47■□□□□ 0.71
CHTOP-202ENST00000368687 ZNF18P17022 549 aa19.47■□□□□ 0.71
CHTOP-202ENST00000368687 BRD2P25440 801 aaKnown RBP19.47■□□□□ 0.71
CHTOP-202ENST00000368687 ATP5C1P36542 298 aaKnown RBP19.47■□□□□ 0.71
CHTOP-202ENST00000368687 TKTL1P51854 596 aa19.47■□□□□ 0.71
CHTOP-202ENST00000368687 PTK2Q05397 1052 aa19.47■□□□□ 0.71
CHTOP-202ENST00000368687 NR1H3Q13133 447 aa19.47■□□□□ 0.71
CHTOP-202ENST00000368687 RUNX3Q13761 415 aa19.47■□□□□ 0.71
CHTOP-202ENST00000368687 ARHGAP44Q17R89 818 aa19.47■□□□□ 0.71
CHTOP-202ENST00000368687 PM20D1Q6GTS8 502 aa19.47■□□□□ 0.71
CHTOP-202ENST00000368687 GPIHBP1Q8IV16 184 aa19.47■□□□□ 0.71
CHTOP-202ENST00000368687 TMEM105Q8N8V8 129 aa19.47■□□□□ 0.71
CHTOP-202ENST00000368687 SLC35F5Q8WV83 523 aa19.47■□□□□ 0.71
CHTOP-202ENST00000368687 TFAP2BQ92481 460 aa19.47■□□□□ 0.71
CHTOP-202ENST00000368687 FAM3CQ92520 227 aa19.47■□□□□ 0.71
CHTOP-202ENST00000368687 OTUB2Q96DC9 234 aa19.47■□□□□ 0.71
CHTOP-202ENST00000368687 RNF38Q9H0F5 515 aa19.47■□□□□ 0.71
CHTOP-202ENST00000368687 LTB4R2Q9NPC1 389 aa19.47■□□□□ 0.71
CHTOP-202ENST00000368687 SIX2Q9NPC8 291 aa19.47■□□□□ 0.71
CHTOP-202ENST00000368687 DNMT3LQ9UJW3 386 aa19.47■□□□□ 0.71
CHTOP-202ENST00000368687 NAGPAQ9UK23 515 aa19.47■□□□□ 0.71
CHTOP-202ENST00000368687 DNAJC12Q9UKB3 198 aa19.47■□□□□ 0.71
CHTOP-202ENST00000368687 SART1O43290 800 aaKnown RBP19.46■□□□□ 0.71
CHTOP-202ENST00000368687 FBXO21O94952 628 aa19.46■□□□□ 0.71
CHTOP-202ENST00000368687 NFATC1O95644 943 aa19.46■□□□□ 0.71
CHTOP-202ENST00000368687 USP8P40818 1118 aa19.46■□□□□ 0.71
CHTOP-202ENST00000368687 ACADSBP45954 432 aa19.46■□□□□ 0.71
CHTOP-202ENST00000368687 ZNF165P49910 485 aa19.46■□□□□ 0.71
CHTOP-202ENST00000368687 TCF15Q12870 199 aa19.46■□□□□ 0.71
CHTOP-202ENST00000368687 UBXN2BQ14CS0 331 aa19.46■□□□□ 0.71
CHTOP-202ENST00000368687 AOPEPQ8N6M6 819 aa19.46■□□□□ 0.71
CHTOP-202ENST00000368687 STK32AQ8WU08 396 aa19.46■□□□□ 0.71
CHTOP-202ENST00000368687 IRGQQ8WZA9 623 aa19.46■□□□□ 0.71
CHTOP-202ENST00000368687 ZFYVE19Q96K21 471 aa19.46■□□□□ 0.71
CHTOP-202ENST00000368687 TRIM62Q9BVG3 475 aa19.46■□□□□ 0.71
CHTOP-202ENST00000368687 VPS16Q9H269 839 aa19.46■□□□□ 0.71
CHTOP-202ENST00000368687 CCSER2Q9H7U1 834 aa19.46■□□□□ 0.71
CHTOP-202ENST00000368687 OLA1Q9NTK5 396 aaKnown RBP19.46■□□□□ 0.71
CHTOP-202ENST00000368687 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.46■□□□□ 0.71
CHTOP-202ENST00000368687 A0A1W2PQH9 124 aa19.45■□□□□ 0.7
CHTOP-202ENST00000368687 LGALS16A8MUM7 142 aa19.45■□□□□ 0.7
CHTOP-202ENST00000368687 BECN2A8MW95 431 aa19.45■□□□□ 0.7
CHTOP-202ENST00000368687 SPECC1L-ADORA2AF8WAN1 911 aa19.45■□□□□ 0.7
CHTOP-202ENST00000368687 THAP12O43422 761 aa19.45■□□□□ 0.7
CHTOP-202ENST00000368687 RARGP13631 454 aa19.45■□□□□ 0.7
CHTOP-202ENST00000368687 UCHL3P15374 230 aa19.45■□□□□ 0.7
CHTOP-202ENST00000368687 CTHP32929 405 aa19.45■□□□□ 0.7
CHTOP-202ENST00000368687 RPS9P46781 194 aaKnown RBP19.45■□□□□ 0.7
CHTOP-202ENST00000368687 SNX16P57768 344 aa19.45■□□□□ 0.7
CHTOP-202ENST00000368687 TPM4P67936 248 aa19.45■□□□□ 0.7
CHTOP-202ENST00000368687 NCAPHQ15003 741 aa19.45■□□□□ 0.7
CHTOP-202ENST00000368687 KLHDC7AQ5VTJ3 777 aa19.45■□□□□ 0.7
CHTOP-202ENST00000368687 GJB7Q6PEY0 223 aa19.45■□□□□ 0.7
CHTOP-202ENST00000368687 UBA3Q8TBC4 463 aa19.45■□□□□ 0.7
CHTOP-202ENST00000368687 ZNF606Q8WXB4 792 aa19.45■□□□□ 0.7
CHTOP-202ENST00000368687 GOLGA1Q92805 767 aa19.45■□□□□ 0.7
CHTOP-202ENST00000368687 SECISBP2LQ93073 1101 aaKnown RBP19.45■□□□□ 0.7
CHTOP-202ENST00000368687 GTSE1Q9NYZ3 720 aa19.45■□□□□ 0.7
CHTOP-202ENST00000368687 LSM7Q9UK45 103 aaKnown RBP19.45■□□□□ 0.7
CHTOP-202ENST00000368687 SH3BP1Q9Y3L3 701 aa19.45■□□□□ 0.7
CHTOP-202ENST00000368687 CEP83Q9Y592 693 aa19.45■□□□□ 0.7
CHTOP-202ENST00000368687 PIEZO1Q92508 2521 aa19.45■□□□□ 0.7
CHTOP-202ENST00000368687 CACNA1HO95180 2353 aa19.44■□□□□ 0.7
CHTOP-202ENST00000368687 FAM170BA6NMN3 283 aa19.44■□□□□ 0.7
CHTOP-202ENST00000368687 GALR2O43603 387 aaPredicted RBP19.44■□□□□ 0.7
CHTOP-202ENST00000368687 COPB1P53618 953 aaKnown RBP19.44■□□□□ 0.7
CHTOP-202ENST00000368687 YWHAGP61981 247 aaKnown RBP eCLIP19.44■□□□□ 0.7
CHTOP-202ENST00000368687 ADIGQ0VDE8 80 aa19.44■□□□□ 0.7
CHTOP-202ENST00000368687 RAPGEF1Q13905 1077 aa19.44■□□□□ 0.7
CHTOP-202ENST00000368687 LRRC32Q14392 662 aa19.44■□□□□ 0.7
CHTOP-202ENST00000368687 C10orf120Q5SQS8 335 aa19.44■□□□□ 0.7
CHTOP-202ENST00000368687 RSRC2Q7L4I2 434 aaKnown RBP19.44■□□□□ 0.7
CHTOP-202ENST00000368687 CCDC105Q8IYK2 499 aa19.44■□□□□ 0.7
CHTOP-202ENST00000368687 FAM71AQ8IYT1 594 aa19.44■□□□□ 0.7
CHTOP-202ENST00000368687 TTC16Q8NEE8 873 aa19.44■□□□□ 0.7
CHTOP-202ENST00000368687 NOX5Q96PH1 765 aa19.44■□□□□ 0.7
CHTOP-202ENST00000368687 FUCA2Q9BTY2 467 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms