RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 FGFR4P22455 802 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 TIE1P35590 1138 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 ADARP55265 1226 aaKnown RBP3.88□□□□□ -1.79
SYNE1-207ENST00000367255 EFCAB3Q8N7B9 438 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 CDKN2AIPNLQ96HQ2 116 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 ZNF335Q9H4Z2 1342 aaPredicted RBP3.88□□□□□ -1.79
SYNE1-207ENST00000367255 TRAPPC13A5PLN9 417 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 NCF2P19878 526 aaPredicted RBP3.88□□□□□ -1.79
SYNE1-207ENST00000367255 NMT1P30419 496 aaKnown RBP3.88□□□□□ -1.79
SYNE1-207ENST00000367255 NUMBP49757 651 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 CERS2Q96G23 380 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 PPP1R16AQ96I34 528 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 RSAD1Q9HA92 442 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 MAP3K2Q9Y2U5 619 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 H7C1W4 665 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 PJA2O43164 708 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 S100A6P06703 90 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 OR52Z1P0C646 297 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 FDFT1P37268 417 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 TFCP2Q12800 502 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 PDE8AO60658 829 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 STOMP27105 288 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 PIK3CAP42336 1068 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 MAGEA11P43364 429 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 AK2P54819 239 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 SLC34A1Q06495 639 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 CDH18Q13634 790 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 PDK1Q15118 436 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 HMGN3Q15651 99 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 DGKKQ5KSL6 1271 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 TTC38Q5R3I4 469 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 CLEC4GQ6UXB4 293 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 DNAJB3Q8WWF6 145 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 PPP3R2Q96LZ3 170 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 PRAM1Q96QH2 718 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 FNBP1Q96RU3 617 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 TBX22Q9Y458 520 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 HEXIM1O94992 359 aaKnown RBP3.88□□□□□ -1.79
SYNE1-207ENST00000367255 PTTG1O95997 202 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 S100BP04271 92 aaPredicted RBP3.88□□□□□ -1.79
SYNE1-207ENST00000367255 FRG1Q14331 258 aaKnown RBP3.88□□□□□ -1.79
SYNE1-207ENST00000367255 FAM45BPQ6NSW5 357 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 LARP4BQ92615 738 aaKnown RBP3.88□□□□□ -1.79
SYNE1-207ENST00000367255 NACC1Q96RE7 527 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 TTYH2Q9BSA4 534 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 ZNF862O60290 1169 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 AMPD1P23109 780 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 ARL13BQ3SXY8 428 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 TMTC4Q5T4D3 741 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 RSBN1Q5VWQ0 802 aaPredicted RBP3.88□□□□□ -1.79
SYNE1-207ENST00000367255 MZT2BQ6NZ67 158 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 GPR141Q7Z602 305 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 RTKN2Q8IZC4 609 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 ZNF444Q8N0Y2 327 aaPredicted RBP3.88□□□□□ -1.79
SYNE1-207ENST00000367255 BHLHE22Q8NFJ8 381 aaPredicted RBP3.88□□□□□ -1.79
SYNE1-207ENST00000367255 PEX16Q9Y5Y5 336 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 FAM170BA6NMN3 283 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 NCF1P14598 390 aaPredicted RBP3.88□□□□□ -1.79
SYNE1-207ENST00000367255 GNPTABQ3T906 1256 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 ANKRD23Q86SG2 305 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 PHOX2BQ99453 314 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 TMX2Q9Y320 296 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 L3MBTL1Q9Y468 752 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 FOXN1O15353 648 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 SEC24DO94855 1032 aaPredicted RBP3.88□□□□□ -1.79
SYNE1-207ENST00000367255 FARP2O94887 1054 aaPredicted RBP3.88□□□□□ -1.79
SYNE1-207ENST00000367255 TMC5Q6UXY8 1006 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 ARMCX2Q7L311 632 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 DENND2DQ9H6A0 471 aaPredicted RBP3.88□□□□□ -1.79
SYNE1-207ENST00000367255 DLC1Q96QB1 1528 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 USP31Q70CQ4 1352 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 MGRN1O60291 552 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 NBNO60934 754 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 TFRCP02786 760 aaKnown RBP3.88□□□□□ -1.79
SYNE1-207ENST00000367255 NR4A2P43354 598 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 CACNB3P54284 484 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 NCF4Q15080 339 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 KCNJ8Q15842 424 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 DPY19L1Q2PZI1 675 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 IL23RQ5VWK5 629 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 FAM149B1Q96BN6 582 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 SPATA9Q9BWV2 254 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 GON7Q9BXV9 100 aa3.88□□□□□ -1.79
SYNE1-207ENST00000367255 CYP51A1Q16850 503 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 ZNF829Q3KNS6 432 aaPredicted RBP3.87□□□□□ -1.79
SYNE1-207ENST00000367255 C11orf74Q86VG3 221 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 LATS2Q9NRM7 1088 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 E2F3O00716 465 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 SRGNP10124 158 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 PMF1Q6P1K2 205 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 MDM1Q8TC05 714 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 TLR6Q9Y2C9 796 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 VAMP4O75379 141 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 RCVRNP35243 200 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 CEBPGP53567 150 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 ZNF767PQ75MW2 155 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 ROPN1LQ96C74 230 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 TRIM8Q9BZR9 551 aa3.87□□□□□ -1.79
SYNE1-207ENST00000367255 METTL5Q9NRN9 209 aaKnown RBP3.87□□□□□ -1.79
SYNE1-207ENST00000367255 RAPGEF6Q8TEU7 1601 aa3.87□□□□□ -1.79
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