RNA–Protein interactions for RNA: ENST00000367178.7

SCAF8-201, Transcript of SR-related CTD associated factor 8, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCAF8, Length 5,057 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-201ENST00000367178 RIC8BQ9NVN3 520 aa17.08■□□□□ 0.32
SCAF8-201ENST00000367178 PCDHB5Q9Y5E4 795 aa17.08■□□□□ 0.32
SCAF8-201ENST00000367178 GLRA3O75311 464 aa17.08■□□□□ 0.32
SCAF8-201ENST00000367178 EPHB3P54753 998 aa17.08■□□□□ 0.32
SCAF8-201ENST00000367178 PTGISQ16647 500 aa17.08■□□□□ 0.32
SCAF8-201ENST00000367178 CELF3Q5SZQ8 465 aaKnown RBP17.08■□□□□ 0.32
SCAF8-201ENST00000367178 AGAP9Q5VTM2 703 aa17.08■□□□□ 0.32
SCAF8-201ENST00000367178 EFL1Q7Z2Z2 1120 aaKnown RBP17.08■□□□□ 0.32
SCAF8-201ENST00000367178 CARNMT1Q8N4J0 409 aa17.08■□□□□ 0.32
SCAF8-201ENST00000367178 VPS28Q9UK41 221 aa17.08■□□□□ 0.32
SCAF8-201ENST00000367178 SPDYE5A6NIY4 337 aa17.07■□□□□ 0.32
SCAF8-201ENST00000367178 TTLL13PA6NNM8 815 aa17.07■□□□□ 0.32
SCAF8-201ENST00000367178 TBKBP1A7MCY6 615 aa17.07■□□□□ 0.32
SCAF8-201ENST00000367178 RHOCP08134 193 aa17.07■□□□□ 0.32
SCAF8-201ENST00000367178 DNAJB2P25686 324 aa17.07■□□□□ 0.32
SCAF8-201ENST00000367178 CCR1P32246 355 aa17.07■□□□□ 0.32
SCAF8-201ENST00000367178 CASP5P51878 434 aa17.07■□□□□ 0.32
SCAF8-201ENST00000367178 CSE1LP55060 971 aaKnown RBP17.07■□□□□ 0.32
SCAF8-201ENST00000367178 POU4F1Q01851 419 aa17.07■□□□□ 0.32
SCAF8-201ENST00000367178 SPDYE7PQ495Y7 208 aa17.07■□□□□ 0.32
SCAF8-201ENST00000367178 DENND1BQ6P3S1 775 aa17.07■□□□□ 0.32
SCAF8-201ENST00000367178 FUT8Q9BYC5 575 aa17.07■□□□□ 0.32
SCAF8-201ENST00000367178 B2RBV5 119 aa17.07■□□□□ 0.32
SCAF8-201ENST00000367178 CLASP2O75122 1294 aaKnown RBP17.07■□□□□ 0.32
SCAF8-201ENST00000367178 NUMBP49757 651 aa17.07■□□□□ 0.32
SCAF8-201ENST00000367178 PTENP60484 403 aa17.07■□□□□ 0.32
SCAF8-201ENST00000367178 BEX3Q00994 111 aa17.07■□□□□ 0.32
SCAF8-201ENST00000367178 ERMARDQ5T6L9 678 aa17.07■□□□□ 0.32
SCAF8-201ENST00000367178 ZDHHC17Q8IUH5 632 aa17.07■□□□□ 0.32
SCAF8-201ENST00000367178 GLIS3Q8NEA6 775 aa17.07■□□□□ 0.32
SCAF8-201ENST00000367178 COPS5Q92905 334 aa17.07■□□□□ 0.32
SCAF8-201ENST00000367178 TRPV2Q9Y5S1 764 aa17.07■□□□□ 0.32
SCAF8-201ENST00000367178 NFASCO94856 1347 aa17.07■□□□□ 0.32
SCAF8-201ENST00000367178 LRRC10BA6NIK2 292 aa17.07■□□□□ 0.32
SCAF8-201ENST00000367178 NCAM2O15394 837 aa17.07■□□□□ 0.32
SCAF8-201ENST00000367178 ENDOD1O94919 500 aa17.07■□□□□ 0.32
SCAF8-201ENST00000367178 TBX2Q13207 712 aaPredicted RBP17.07■□□□□ 0.32
SCAF8-201ENST00000367178 SGO1Q5FBB7 561 aa17.07■□□□□ 0.32
SCAF8-201ENST00000367178 AARS2Q5JTZ9 985 aaKnown RBP17.07■□□□□ 0.32
SCAF8-201ENST00000367178 UGT3A1Q6NUS8 523 aa17.07■□□□□ 0.32
SCAF8-201ENST00000367178 LONP2Q86WA8 852 aa17.07■□□□□ 0.32
SCAF8-201ENST00000367178 TMEM134Q9H6X4 195 aa17.07■□□□□ 0.32
SCAF8-201ENST00000367178 RRN3Q9NYV6 651 aa17.07■□□□□ 0.32
SCAF8-201ENST00000367178 SRP72O76094 671 aaKnown RBP17.07■□□□□ 0.32
SCAF8-201ENST00000367178 MICAL2O94851 1124 aa17.07■□□□□ 0.32
SCAF8-201ENST00000367178 EVX2Q03828 476 aa17.07■□□□□ 0.32
SCAF8-201ENST00000367178 DTX3LQ8TDB6 740 aa17.07■□□□□ 0.32
SCAF8-201ENST00000367178 THTPAQ9BU02 230 aa17.07■□□□□ 0.32
SCAF8-201ENST00000367178 UBXN6Q9BZV1 441 aa17.07■□□□□ 0.32
SCAF8-201ENST00000367178 CHST12Q9NRB3 414 aa17.07■□□□□ 0.32
SCAF8-201ENST00000367178 L1RE1Q9UN81 338 aa17.07■□□□□ 0.32
SCAF8-201ENST00000367178 LOC100653049A0A140TA62 436 aa17.06■□□□□ 0.32
SCAF8-201ENST00000367178 KRT34O76011 436 aa17.06■□□□□ 0.32
SCAF8-201ENST00000367178 PPP3CCP48454 512 aa17.06■□□□□ 0.32
SCAF8-201ENST00000367178 SLC2A14Q8TDB8 520 aa17.06■□□□□ 0.32
SCAF8-201ENST00000367178 UCMAQ8WVF2 138 aa17.06■□□□□ 0.32
SCAF8-201ENST00000367178 FBXO44Q9H4M3 255 aa17.06■□□□□ 0.32
SCAF8-201ENST00000367178 PCDH9Q9HC56 1237 aa17.06■□□□□ 0.32
SCAF8-201ENST00000367178 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.06■□□□□ 0.32
SCAF8-201ENST00000367178 DOLKQ9UPQ8 538 aa17.06■□□□□ 0.32
SCAF8-201ENST00000367178 MROH7Q68CQ1 1323 aa17.06■□□□□ 0.32
SCAF8-201ENST00000367178 RECQL4O94761 1208 aa17.06■□□□□ 0.32
SCAF8-201ENST00000367178 AVPR1AP37288 418 aa17.06■□□□□ 0.32
SCAF8-201ENST00000367178 ZNF467Q7Z7K2 595 aaPredicted RBP17.06■□□□□ 0.32
SCAF8-201ENST00000367178 NAF1Q96HR8 494 aaKnown RBP17.06■□□□□ 0.32
SCAF8-201ENST00000367178 UBE2OQ9C0C9 1292 aaKnown RBP17.06■□□□□ 0.32
SCAF8-201ENST00000367178 TLR8Q9NR97 1041 aaKnown RBP17.06■□□□□ 0.32
SCAF8-201ENST00000367178 KPNA1P52294 538 aaPredicted RBP17.06■□□□□ 0.32
SCAF8-201ENST00000367178 PPP3CAQ08209 521 aa17.06■□□□□ 0.32
SCAF8-201ENST00000367178 UNC45BQ8IWX7 931 aa17.06■□□□□ 0.32
SCAF8-201ENST00000367178 CEP19Q96LK0 163 aa17.06■□□□□ 0.32
SCAF8-201ENST00000367178 PURBQ96QR8 312 aaKnown RBP17.06■□□□□ 0.32
SCAF8-201ENST00000367178 AVENQ9NQS1 362 aaPredicted RBP17.06■□□□□ 0.32
SCAF8-201ENST00000367178 CHCHD3Q9NX63 227 aaKnown RBP17.06■□□□□ 0.32
SCAF8-201ENST00000367178 GLI1P08151 1106 aa17.06■□□□□ 0.32
SCAF8-201ENST00000367178 FAM171A1Q5VUB5 890 aa17.06■□□□□ 0.32
SCAF8-201ENST00000367178 C16orf89Q6UX73 402 aa17.06■□□□□ 0.32
SCAF8-201ENST00000367178 BTNL9Q6UXG8 535 aa17.06■□□□□ 0.32
SCAF8-201ENST00000367178 SETD3Q86TU7 594 aaPredicted RBP17.06■□□□□ 0.32
SCAF8-201ENST00000367178 SMARCD1Q96GM5 515 aa17.06■□□□□ 0.32
SCAF8-201ENST00000367178 SUPT7LO94864 414 aa17.05■□□□□ 0.32
SCAF8-201ENST00000367178 GLRA2P23416 452 aa17.05■□□□□ 0.32
SCAF8-201ENST00000367178 PKN3Q6P5Z2 889 aa17.05■□□□□ 0.32
SCAF8-201ENST00000367178 TAGAPQ8N103 731 aa17.05■□□□□ 0.32
SCAF8-201ENST00000367178 PAFAH2Q99487 392 aa17.05■□□□□ 0.32
SCAF8-201ENST00000367178 FAM167BQ9BTA0 163 aa17.05■□□□□ 0.32
SCAF8-201ENST00000367178 FICDQ9BVA6 458 aa17.05■□□□□ 0.32
SCAF8-201ENST00000367178 ILKAPQ9H0C8 392 aaPredicted RBP17.05■□□□□ 0.32
SCAF8-201ENST00000367178 HMX1Q9NP08 348 aaPredicted RBP17.05■□□□□ 0.32
SCAF8-201ENST00000367178 NT5MQ9NPB1 228 aa17.05■□□□□ 0.32
SCAF8-201ENST00000367178 CLCA2Q9UQC9 943 aa17.05■□□□□ 0.32
SCAF8-201ENST00000367178 VPS26AO75436 327 aa17.05■□□□□ 0.32
SCAF8-201ENST00000367178 RHOAP61586 193 aa17.05■□□□□ 0.32
SCAF8-201ENST00000367178 SCUBE3Q8IX30 993 aa17.05■□□□□ 0.32
SCAF8-201ENST00000367178 COLGALT1Q8NBJ5 622 aa17.05■□□□□ 0.32
SCAF8-201ENST00000367178 OTUB1Q96FW1 271 aaPredicted RBP17.05■□□□□ 0.32
SCAF8-201ENST00000367178 TLR10Q9BXR5 811 aa17.05■□□□□ 0.32
SCAF8-201ENST00000367178 DMAP1Q9NPF5 467 aaPredicted RBP17.05■□□□□ 0.32
SCAF8-201ENST00000367178 IARS2Q9NSE4 1012 aaKnown RBP17.05■□□□□ 0.32
SCAF8-201ENST00000367178 RBM22Q9NW64 420 aaKnown RBP eCLIP17.05■□□□□ 0.324e-7■■■■■ 38
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms