RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 PPM1HQ9ULR3 514 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 CSDE1O75534 798 aaKnown RBP8.51□□□□□ -1.05
CD46-208ENST00000367042 LYNP07948 512 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 GSTA2P09210 222 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 C6orf222P0C671 652 aaPredicted RBP8.51□□□□□ -1.05
CD46-208ENST00000367042 RAB27AP51159 221 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 OCRLQ01968 901 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 TAP1Q03518 808 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 LAMB3Q13751 1172 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 SGSM1Q2NKQ1 1148 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.51□□□□□ -1.05
CD46-208ENST00000367042 LRRC38Q5VT99 294 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 C15orf39Q6ZRI6 1047 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 BBS12Q6ZW61 710 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 SDCCAG8Q86SQ7 713 aaPredicted RBP8.51□□□□□ -1.05
CD46-208ENST00000367042 ST13P4Q8IZP2 240 aaPredicted RBP8.51□□□□□ -1.05
CD46-208ENST00000367042 GALNT15Q8N3T1 639 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 RNF149Q8NC42 400 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 SLC44A1Q8WWI5 657 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 PANX3Q96QZ0 392 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 CENPKQ9BS16 269 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 KLC2Q9H0B6 622 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 KRT82Q9NSB4 513 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 IRAK4Q9NWZ3 460 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 WDR35Q9P2L0 1181 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 SLC7A8Q9UHI5 535 aa8.51□□□□□ -1.05
CD46-208ENST00000367042 APOBEC2Q9Y235 224 aaKnown RBP8.51□□□□□ -1.05
CD46-208ENST00000367042 A8MXQ7 604 aa8.5□□□□□ -1.05
CD46-208ENST00000367042 APOC4-APOC2K7ER74 178 aa8.5□□□□□ -1.05
CD46-208ENST00000367042 APOC2P02655 101 aa8.5□□□□□ -1.05
CD46-208ENST00000367042 RBL1P28749 1068 aa8.5□□□□□ -1.05
CD46-208ENST00000367042 YWHAEP62258 255 aaKnown RBP8.5□□□□□ -1.05
CD46-208ENST00000367042 CRADDP78560 199 aa8.5□□□□□ -1.05
CD46-208ENST00000367042 MED21Q13503 144 aa8.5□□□□□ -1.05
CD46-208ENST00000367042 DNAL1Q4LDG9 190 aa8.5□□□□□ -1.05
CD46-208ENST00000367042 ZNF667Q5HYK9 610 aa8.5□□□□□ -1.05
CD46-208ENST00000367042 PRAMEF18Q5VWM3 479 aa8.5□□□□□ -1.05
CD46-208ENST00000367042 RSBN1LQ6PCB5 846 aaPredicted RBP8.5□□□□□ -1.05
CD46-208ENST00000367042 DENND5BQ6ZUT9 1274 aa8.5□□□□□ -1.05
CD46-208ENST00000367042 KIAA0319LQ8IZA0 1049 aa8.5□□□□□ -1.05
CD46-208ENST00000367042 CEP120Q8N960 986 aa8.5□□□□□ -1.05
CD46-208ENST00000367042 NETO2Q8NC67 525 aa8.5□□□□□ -1.05
CD46-208ENST00000367042 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.5□□□□□ -1.052e-8■□□□□ 9.9
CD46-208ENST00000367042 PPP4R1Q8TF05 950 aa8.5□□□□□ -1.05
CD46-208ENST00000367042 ANKRD36BP1Q96IX9 119 aa8.5□□□□□ -1.05
CD46-208ENST00000367042 CPXM1Q96SM3 734 aa8.5□□□□□ -1.05
CD46-208ENST00000367042 SEPT10Q9P0V9 454 aa8.5□□□□□ -1.05
CD46-208ENST00000367042 PDP2Q9P2J9 529 aa8.5□□□□□ -1.05
CD46-208ENST00000367042 RPL26L1Q9UNX3 145 aaKnown RBP8.5□□□□□ -1.05
CD46-208ENST00000367042 DNAJC16Q9Y2G8 782 aa8.5□□□□□ -1.05
CD46-208ENST00000367042 SYNJ2BP-COX16A0A087WUM0 186 aa8.5□□□□□ -1.05
CD46-208ENST00000367042 NPM3O75607 178 aaKnown RBP8.5□□□□□ -1.05
CD46-208ENST00000367042 PROCP04070 461 aa8.5□□□□□ -1.05
CD46-208ENST00000367042 SESN2P58004 480 aaPredicted RBP8.5□□□□□ -1.05
CD46-208ENST00000367042 TRMT5Q32P41 509 aaKnown RBP8.5□□□□□ -1.05
CD46-208ENST00000367042 MMEL1Q495T6 779 aa8.5□□□□□ -1.05
CD46-208ENST00000367042 RALGPS1Q5JS13 557 aa8.5□□□□□ -1.05
CD46-208ENST00000367042 RAPH1Q70E73 1250 aa8.5□□□□□ -1.05
CD46-208ENST00000367042 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.5□□□□□ -1.05
CD46-208ENST00000367042 NMD3Q96D46 503 aaKnown RBP8.5□□□□□ -1.05
CD46-208ENST00000367042 ECSITQ9BQ95 431 aa8.5□□□□□ -1.05
CD46-208ENST00000367042 COX16Q9P0S2 106 aa8.5□□□□□ -1.05
CD46-208ENST00000367042 SLC17A6Q9P2U8 582 aa8.5□□□□□ -1.05
CD46-208ENST00000367042 NR2E3Q9Y5X4 410 aa8.5□□□□□ -1.05
CD46-208ENST00000367042 MED7O43513 233 aa8.49□□□□□ -1.05
CD46-208ENST00000367042 PGM3O95394 542 aa8.49□□□□□ -1.05
CD46-208ENST00000367042 LSM8O95777 96 aaKnown RBP8.49□□□□□ -1.05
CD46-208ENST00000367042 ASS1P00966 412 aaKnown RBP8.49□□□□□ -1.05
CD46-208ENST00000367042 SAT1P21673 171 aa8.49□□□□□ -1.05
CD46-208ENST00000367042 RAB6CQ53S08 254 aa8.49□□□□□ -1.05
CD46-208ENST00000367042 OR52E8Q6IFG1 317 aa8.49□□□□□ -1.05
CD46-208ENST00000367042 TRMT10BQ6PF06 316 aaKnown RBP8.49□□□□□ -1.05
CD46-208ENST00000367042 VSIG10LQ86VR7 867 aa8.49□□□□□ -1.05
CD46-208ENST00000367042 WDTC1Q8N5D0 677 aa8.49□□□□□ -1.05
CD46-208ENST00000367042 SHKBP1Q8TBC3 707 aa8.49□□□□□ -1.05
CD46-208ENST00000367042 PIP4K2CQ8TBX8 421 aa8.49□□□□□ -1.05
CD46-208ENST00000367042 ZNF526Q8TF50 670 aaPredicted RBP8.49□□□□□ -1.05
CD46-208ENST00000367042 PRPF31Q8WWY3 499 aaKnown RBP8.49□□□□□ -1.05
CD46-208ENST00000367042 FAM136AQ96C01 138 aa8.49□□□□□ -1.05
CD46-208ENST00000367042 RAB6CQ9H0N0 254 aa8.49□□□□□ -1.05
CD46-208ENST00000367042 ASCC2Q9H1I8 757 aaPredicted RBP8.49□□□□□ -1.05
CD46-208ENST00000367042 EBF3Q9H4W6 596 aa8.49□□□□□ -1.05
CD46-208ENST00000367042 TLE6Q9H808 572 aa8.49□□□□□ -1.05
CD46-208ENST00000367042 XAB2Q9HCS7 855 aaKnown RBP8.49□□□□□ -1.05
CD46-208ENST00000367042 ASNSD1Q9NWL6 643 aa8.49□□□□□ -1.05
CD46-208ENST00000367042 KCNK4Q9NYG8 393 aa8.49□□□□□ -1.05
CD46-208ENST00000367042 IL1RAPL1Q9NZN1 696 aa8.49□□□□□ -1.05
CD46-208ENST00000367042 SMAPO00193 183 aa8.49□□□□□ -1.05
CD46-208ENST00000367042 ABLIM1O14639 778 aa8.49□□□□□ -1.05
CD46-208ENST00000367042 CFLARO15519 480 aa8.49□□□□□ -1.05
CD46-208ENST00000367042 SORBS2O94875 1100 aaKnown RBP8.49□□□□□ -1.05
CD46-208ENST00000367042 APBA3O96018 575 aa8.49□□□□□ -1.05
CD46-208ENST00000367042 OATP04181 439 aa8.49□□□□□ -1.05
CD46-208ENST00000367042 HMGCS2P54868 508 aa8.49□□□□□ -1.05
CD46-208ENST00000367042 TFDP2Q14188 446 aa8.49□□□□□ -1.05
CD46-208ENST00000367042 LRRC23Q53EV4 343 aaPredicted RBP8.49□□□□□ -1.05
CD46-208ENST00000367042 MAP7D3Q8IWC1 876 aa8.49□□□□□ -1.05
CD46-208ENST00000367042 ATP2A3Q93084 1043 aa8.49□□□□□ -1.05
CD46-208ENST00000367042 CEP41Q9BYV8 373 aa8.49□□□□□ -1.05
CD46-208ENST00000367042 MIS12Q9H081 205 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms