RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 KIF4AO95239 1232 aa11.92□□□□□ -0.5
CSNK1E-202ENST00000366216 TNNC2P02585 160 aa11.92□□□□□ -0.5
CSNK1E-202ENST00000366216 RHOP08100 348 aa11.92□□□□□ -0.5
CSNK1E-202ENST00000366216 PNMA6AP0CW24 399 aaPredicted RBP11.92□□□□□ -0.5
CSNK1E-202ENST00000366216 CXCL8P10145 99 aa11.92□□□□□ -0.5
CSNK1E-202ENST00000366216 CEBPBP17676 345 aa11.92□□□□□ -0.5
CSNK1E-202ENST00000366216 TUBB2AQ13885 445 aa11.92□□□□□ -0.5
CSNK1E-202ENST00000366216 ALKBH5Q6P6C2 394 aaKnown RBP11.92□□□□□ -0.5
CSNK1E-202ENST00000366216 NOTUMQ6P988 496 aa11.92□□□□□ -0.5
CSNK1E-202ENST00000366216 SLC27A1Q6PCB7 646 aa11.92□□□□□ -0.5
CSNK1E-202ENST00000366216 CD300LGQ6UXG3 332 aa11.92□□□□□ -0.5
CSNK1E-202ENST00000366216 RTL10Q7L3V2 364 aa11.92□□□□□ -0.5
CSNK1E-202ENST00000366216 CEP57Q86XR8 500 aa11.92□□□□□ -0.5
CSNK1E-202ENST00000366216 EFCAB13Q8IY85 973 aa11.92□□□□□ -0.5
CSNK1E-202ENST00000366216 SLC35F6Q8N357 371 aa11.92□□□□□ -0.5
CSNK1E-202ENST00000366216 RNF10Q8N5U6 811 aaKnown RBP11.92□□□□□ -0.5
CSNK1E-202ENST00000366216 MYRIPQ8NFW9 859 aa11.92□□□□□ -0.5
CSNK1E-202ENST00000366216 OLIG1Q8TAK6 271 aa11.92□□□□□ -0.5
CSNK1E-202ENST00000366216 ZCCHC14Q8WYQ9 949 aaKnown RBP11.92□□□□□ -0.5
CSNK1E-202ENST00000366216 GATA6Q92908 595 aa11.92□□□□□ -0.5
CSNK1E-202ENST00000366216 TCEAL4Q96EI5 215 aa11.92□□□□□ -0.5
CSNK1E-202ENST00000366216 ACAP3Q96P50 834 aa11.92□□□□□ -0.5
CSNK1E-202ENST00000366216 AGPAT1Q99943 283 aa11.92□□□□□ -0.5
CSNK1E-202ENST00000366216 PI4K2AQ9BTU6 479 aa11.92□□□□□ -0.5
CSNK1E-202ENST00000366216 TUBB2BQ9BVA1 445 aa11.92□□□□□ -0.5
CSNK1E-202ENST00000366216 MFRPQ9BY79 579 aa11.92□□□□□ -0.5
CSNK1E-202ENST00000366216 IRX2Q9BZI1 471 aaPredicted RBP11.92□□□□□ -0.5
CSNK1E-202ENST00000366216 IMPG2Q9BZV3 1241 aa11.92□□□□□ -0.5
CSNK1E-202ENST00000366216 PLEKHA5Q9HAU0 1116 aa11.92□□□□□ -0.5
CSNK1E-202ENST00000366216 ZNF334Q9HCZ1 680 aaPredicted RBP11.92□□□□□ -0.5
CSNK1E-202ENST00000366216 AVENQ9NQS1 362 aaPredicted RBP11.92□□□□□ -0.5
CSNK1E-202ENST00000366216 WDR70Q9NW82 654 aa11.92□□□□□ -0.5
CSNK1E-202ENST00000366216 TRIM10Q9UDY6 481 aa11.92□□□□□ -0.5
CSNK1E-202ENST00000366216 GUCA1BQ9UMX6 200 aa11.92□□□□□ -0.5
CSNK1E-202ENST00000366216 GIT1Q9Y2X7 761 aa11.92□□□□□ -0.5
CSNK1E-202ENST00000366216 PTPRDP23468 1912 aa11.92□□□□□ -0.5
CSNK1E-202ENST00000366216 LACTBL1A8MY62 500 aa11.91□□□□□ -0.5
CSNK1E-202ENST00000366216 GIPC1O14908 333 aa11.91□□□□□ -0.5
CSNK1E-202ENST00000366216 ASS1P00966 412 aaKnown RBP11.91□□□□□ -0.5
CSNK1E-202ENST00000366216 TMEM191BP0C7N4 346 aa11.91□□□□□ -0.5
CSNK1E-202ENST00000366216 SPINK2P20155 84 aa11.91□□□□□ -0.5
CSNK1E-202ENST00000366216 TNFAIP3P21580 790 aa11.91□□□□□ -0.5
CSNK1E-202ENST00000366216 HOXA6P31267 233 aa11.91□□□□□ -0.5
CSNK1E-202ENST00000366216 CCR2P41597 374 aa11.91□□□□□ -0.5
CSNK1E-202ENST00000366216 RAP1GAPP47736 663 aa11.91□□□□□ -0.5
CSNK1E-202ENST00000366216 NOVA1P51513 510 aaKnown RBP11.91□□□□□ -0.5
CSNK1E-202ENST00000366216 BPIFB4P59827 614 aa11.91□□□□□ -0.5
CSNK1E-202ENST00000366216 OSTNP61366 133 aa11.91□□□□□ -0.5
CSNK1E-202ENST00000366216 NOP14P78316 857 aaKnown RBP11.91□□□□□ -0.5
CSNK1E-202ENST00000366216 GRIK3Q13003 919 aa11.91□□□□□ -0.5
CSNK1E-202ENST00000366216 CUL2Q13617 745 aa11.91□□□□□ -0.5
CSNK1E-202ENST00000366216 RAB33AQ14088 237 aa11.91□□□□□ -0.5
CSNK1E-202ENST00000366216 LRRC32Q14392 662 aa11.91□□□□□ -0.5
CSNK1E-202ENST00000366216 SGSM1Q2NKQ1 1148 aa11.91□□□□□ -0.5
CSNK1E-202ENST00000366216 SLC10A6Q3KNW5 377 aa11.91□□□□□ -0.5
CSNK1E-202ENST00000366216 FAM78AQ5JUQ0 283 aa11.91□□□□□ -0.5
CSNK1E-202ENST00000366216 PLA2G2CQ5R387 149 aa11.91□□□□□ -0.5
CSNK1E-202ENST00000366216 FAM171A1Q5VUB5 890 aa11.91□□□□□ -0.5
CSNK1E-202ENST00000366216 RNF43Q68DV7 783 aa11.91□□□□□ -0.5
CSNK1E-202ENST00000366216 WDR5BQ86VZ2 330 aa11.91□□□□□ -0.5
CSNK1E-202ENST00000366216 TAF4BQ92750 862 aa11.91□□□□□ -0.5
CSNK1E-202ENST00000366216 NAPGQ99747 312 aaPredicted RBP11.91□□□□□ -0.5
CSNK1E-202ENST00000366216 CCDC94Q9BW85 323 aaPredicted RBP11.91□□□□□ -0.5
CSNK1E-202ENST00000366216 MTMR12Q9C0I1 747 aa11.91□□□□□ -0.5
CSNK1E-202ENST00000366216 APOBEC3GQ9HC16 384 aaKnown RBP11.91□□□□□ -0.5
CSNK1E-202ENST00000366216 CNTN6Q9UQ52 1028 aa11.91□□□□□ -0.5
CSNK1E-202ENST00000366216 DERAQ9Y315 318 aa11.91□□□□□ -0.5
CSNK1E-202ENST00000366216 C2CD2Q9Y426 696 aa11.91□□□□□ -0.5
CSNK1E-202ENST00000366216 A0A0A6YYK5 440 aaPredicted RBP11.9□□□□□ -0.5
CSNK1E-202ENST00000366216 CTAGE9A4FU28 777 aa11.9□□□□□ -0.5
CSNK1E-202ENST00000366216 CASTOR2A6NHX0 329 aa11.9□□□□□ -0.5
CSNK1E-202ENST00000366216 TAF4O00268 1085 aa11.9□□□□□ -0.5
CSNK1E-202ENST00000366216 PTGESO14684 152 aa11.9□□□□□ -0.5
CSNK1E-202ENST00000366216 MEFVO15553 781 aaPredicted RBP11.9□□□□□ -0.5
CSNK1E-202ENST00000366216 CYP26A1O43174 497 aa11.9□□□□□ -0.5
CSNK1E-202ENST00000366216 TACC1O75410 805 aa11.9□□□□□ -0.5
CSNK1E-202ENST00000366216 NPTXRO95502 500 aa11.9□□□□□ -0.5
CSNK1E-202ENST00000366216 CST3P01034 146 aaPredicted RBP11.9□□□□□ -0.5
CSNK1E-202ENST00000366216 H2AFZP0C0S5 128 aa11.9□□□□□ -0.5
CSNK1E-202ENST00000366216 PSMC3P17980 439 aa11.9□□□□□ -0.5
CSNK1E-202ENST00000366216 GDI1P31150 447 aa11.9□□□□□ -0.5
CSNK1E-202ENST00000366216 OR1D2P34982 312 aa11.9□□□□□ -0.5
CSNK1E-202ENST00000366216 TFAMQ00059 246 aaKnown RBP11.9□□□□□ -0.5
CSNK1E-202ENST00000366216 ZNF252P-AS1Q0IIN9 211 aa11.9□□□□□ -0.5
CSNK1E-202ENST00000366216 TRPC3Q13507 836 aa11.9□□□□□ -0.5
CSNK1E-202ENST00000366216 PRSS36Q5K4E3 855 aa11.9□□□□□ -0.5
CSNK1E-202ENST00000366216 VITQ6UXI7 678 aa11.9□□□□□ -0.5
CSNK1E-202ENST00000366216 H2AFVQ71UI9 128 aa11.9□□□□□ -0.5
CSNK1E-202ENST00000366216 ZNF677Q86XU0 584 aa11.9□□□□□ -0.5
CSNK1E-202ENST00000366216 HACE1Q8IYU2 909 aa11.9□□□□□ -0.5
CSNK1E-202ENST00000366216 TRIM58Q8NG06 486 aa11.9□□□□□ -0.5
CSNK1E-202ENST00000366216 EPS8L1Q8TE68 723 aa11.9□□□□□ -0.5
CSNK1E-202ENST00000366216 FAM84AQ96KN4 292 aa11.9□□□□□ -0.5
CSNK1E-202ENST00000366216 ZSWIM3Q96MP5 696 aa11.9□□□□□ -0.5
CSNK1E-202ENST00000366216 TSPAN18Q96SJ8 248 aa11.9□□□□□ -0.5
CSNK1E-202ENST00000366216 TRIM6Q9C030 488 aaPredicted RBP11.9□□□□□ -0.5
CSNK1E-202ENST00000366216 SMOC1Q9H4F8 434 aa11.9□□□□□ -0.5
CSNK1E-202ENST00000366216 RBM12Q9NTZ6 932 aaKnown RBP11.9□□□□□ -0.5
CSNK1E-202ENST00000366216 NOCTQ9UK39 431 aaKnown RBP11.9□□□□□ -0.5
CSNK1E-202ENST00000366216 TFR2Q9UP52 801 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms