RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 ZNF782Q6ZMW2 699 aaPredicted RBP3.84□□□□□ -1.79
RNU4-48P-201ENST00000365559 KRT28Q7Z3Y7 464 aa3.84□□□□□ -1.79
RNU4-48P-201ENST00000365559 RAB11FIP4Q86YS3 637 aa3.84□□□□□ -1.79
RNU4-48P-201ENST00000365559 HASPINQ8TF76 798 aa3.84□□□□□ -1.79
RNU4-48P-201ENST00000365559 ZNF668Q96K58 619 aaPredicted RBP3.84□□□□□ -1.79
RNU4-48P-201ENST00000365559 HIST1H2AAQ96QV6 131 aa3.84□□□□□ -1.79
RNU4-48P-201ENST00000365559 SELENOOQ9BVL4 669 aa3.84□□□□□ -1.79
RNU4-48P-201ENST00000365559 COLEC11Q9BWP8 271 aa3.84□□□□□ -1.79
RNU4-48P-201ENST00000365559 CIPCQ9C0C6 399 aa3.84□□□□□ -1.79
RNU4-48P-201ENST00000365559 HEYLQ9NQ87 328 aaPredicted RBP3.84□□□□□ -1.79
RNU4-48P-201ENST00000365559 STARD7Q9NQZ5 370 aa3.84□□□□□ -1.79
RNU4-48P-201ENST00000365559 FNIP2Q9P278 1114 aa3.84□□□□□ -1.79
RNU4-48P-201ENST00000365559 PHTF1Q9UMS5 762 aa3.84□□□□□ -1.79
RNU4-48P-201ENST00000365559 TISP43B9A030 160 aa3.83□□□□□ -1.8
RNU4-48P-201ENST00000365559 RASA4BC9J798 803 aa3.83□□□□□ -1.8
RNU4-48P-201ENST00000365559 RASA4O43374 803 aa3.83□□□□□ -1.8
RNU4-48P-201ENST00000365559 HARSP12081 509 aaKnown RBP3.83□□□□□ -1.8
RNU4-48P-201ENST00000365559 MYCLP12524 364 aaPredicted RBP3.83□□□□□ -1.8
RNU4-48P-201ENST00000365559 CREB1P16220 341 aa3.83□□□□□ -1.8
RNU4-48P-201ENST00000365559 YY1P25490 414 aa3.83□□□□□ -1.8
RNU4-48P-201ENST00000365559 MCM5P33992 734 aa3.83□□□□□ -1.8
RNU4-48P-201ENST00000365559 HTR7P34969 479 aa3.83□□□□□ -1.8
RNU4-48P-201ENST00000365559 DIO1P49895 249 aa3.83□□□□□ -1.8
RNU4-48P-201ENST00000365559 RENBPP51606 427 aa3.83□□□□□ -1.8
RNU4-48P-201ENST00000365559 SUMO2P61956 95 aaKnown RBP3.83□□□□□ -1.8
RNU4-48P-201ENST00000365559 LMAN2Q12907 356 aa3.83□□□□□ -1.8
RNU4-48P-201ENST00000365559 CCDC142Q17RM4 750 aa3.83□□□□□ -1.8
RNU4-48P-201ENST00000365559 FAM209BQ5JX69 171 aa3.83□□□□□ -1.8
RNU4-48P-201ENST00000365559 COLEC12Q5KU26 742 aa3.83□□□□□ -1.8
RNU4-48P-201ENST00000365559 CCSAPQ6IQ19 270 aaPredicted RBP3.83□□□□□ -1.8
RNU4-48P-201ENST00000365559 MZT2AQ6P582 158 aa3.83□□□□□ -1.8
RNU4-48P-201ENST00000365559 CRTC1Q6UUV9 634 aa3.83□□□□□ -1.8
RNU4-48P-201ENST00000365559 CATSPERGQ6ZRH7 1159 aa3.83□□□□□ -1.8
RNU4-48P-201ENST00000365559 PTCHD4Q6ZW05 846 aa3.83□□□□□ -1.8
RNU4-48P-201ENST00000365559 BCDIN3DQ7Z5W3 292 aaKnown RBP3.83□□□□□ -1.8
RNU4-48P-201ENST00000365559 C11orf96Q7Z7L8 435 aa3.83□□□□□ -1.8
RNU4-48P-201ENST00000365559 TERB1Q8NA31 727 aa3.83□□□□□ -1.8
RNU4-48P-201ENST00000365559 DDB2Q92466 427 aa3.83□□□□□ -1.8
RNU4-48P-201ENST00000365559 DAZAP1Q96EP5 407 aaKnown RBP3.83□□□□□ -1.8
RNU4-48P-201ENST00000365559 ZDHHC12Q96GR4 267 aa3.83□□□□□ -1.8
RNU4-48P-201ENST00000365559 ZC3H10Q96K80 434 aaKnown RBP3.83□□□□□ -1.8
RNU4-48P-201ENST00000365559 FAM227BQ96M60 508 aa3.83□□□□□ -1.8
RNU4-48P-201ENST00000365559 RIPOR3Q96MK2 946 aa3.83□□□□□ -1.8
RNU4-48P-201ENST00000365559 MMS19Q96T76 1030 aa3.83□□□□□ -1.8
RNU4-48P-201ENST00000365559 SLC25A32Q9H2D1 315 aa3.83□□□□□ -1.8
RNU4-48P-201ENST00000365559 TRIM36Q9NQ86 728 aa3.83□□□□□ -1.8
RNU4-48P-201ENST00000365559 CHST12Q9NRB3 414 aa3.83□□□□□ -1.8
RNU4-48P-201ENST00000365559 ASIC5Q9NY37 505 aa3.83□□□□□ -1.8
RNU4-48P-201ENST00000365559 ASAP1Q9ULH1 1129 aa3.83□□□□□ -1.8
RNU4-48P-201ENST00000365559 FRMD4BQ9Y2L6 1034 aa3.83□□□□□ -1.8
RNU4-48P-201ENST00000365559 SLC27A6Q9Y2P4 619 aa3.83□□□□□ -1.8
RNU4-48P-201ENST00000365559 TCRBV5S1A1TA0A578 114 aa3.82□□□□□ -1.8
RNU4-48P-201ENST00000365559 CGB1A6NKQ9 187 aa3.82□□□□□ -1.8
RNU4-48P-201ENST00000365559 LINC01548A6NM66 108 aa3.82□□□□□ -1.8
RNU4-48P-201ENST00000365559 M0R3H8 397 aa3.82□□□□□ -1.8
RNU4-48P-201ENST00000365559 KCNQ3O43525 872 aa3.82□□□□□ -1.8
RNU4-48P-201ENST00000365559 SNX2O60749 519 aa3.82□□□□□ -1.8
RNU4-48P-201ENST00000365559 NDST3O95803 873 aa3.82□□□□□ -1.8
RNU4-48P-201ENST00000365559 PRKCGP05129 697 aa3.82□□□□□ -1.8
RNU4-48P-201ENST00000365559 HMGB1P09429 215 aaKnown RBP3.82□□□□□ -1.8
RNU4-48P-201ENST00000365559 ARP10275 920 aa3.82□□□□□ -1.8
RNU4-48P-201ENST00000365559 GABRB3P28472 473 aa3.82□□□□□ -1.8
RNU4-48P-201ENST00000365559 RBL1P28749 1068 aa3.82□□□□□ -1.8
RNU4-48P-201ENST00000365559 COPAP53621 1224 aa3.82□□□□□ -1.8
RNU4-48P-201ENST00000365559 AK2P54819 239 aa3.82□□□□□ -1.8
RNU4-48P-201ENST00000365559 MRPS21P82921 87 aaKnown RBP3.82□□□□□ -1.8
RNU4-48P-201ENST00000365559 DEUP1Q05D60 604 aa3.82□□□□□ -1.8
RNU4-48P-201ENST00000365559 PICALMQ13492 652 aa3.82□□□□□ -1.8
RNU4-48P-201ENST00000365559 ARL13BQ3SXY8 428 aa3.82□□□□□ -1.8
RNU4-48P-201ENST00000365559 PRAMEF17Q5VTA0 474 aa3.82□□□□□ -1.8
RNU4-48P-201ENST00000365559 KIAA0408Q6ZU52 694 aa3.82□□□□□ -1.8
RNU4-48P-201ENST00000365559 BEND5Q7L4P6 421 aa3.82□□□□□ -1.8
RNU4-48P-201ENST00000365559 PTF1AQ7RTS3 328 aa3.82□□□□□ -1.8
RNU4-48P-201ENST00000365559 DPP9Q86TI2 863 aa3.82□□□□□ -1.8
RNU4-48P-201ENST00000365559 CHSY1Q86X52 802 aa3.82□□□□□ -1.8
RNU4-48P-201ENST00000365559 SFTPA1Q8IWL2 248 aa3.82□□□□□ -1.8
RNU4-48P-201ENST00000365559 OR2C3Q8N628 320 aa3.82□□□□□ -1.8
RNU4-48P-201ENST00000365559 SEMA6DQ8NFY4 1073 aa3.82□□□□□ -1.8
RNU4-48P-201ENST00000365559 RITA1Q96K30 269 aa3.82□□□□□ -1.8
RNU4-48P-201ENST00000365559 SNX18Q96RF0 628 aa3.82□□□□□ -1.8
RNU4-48P-201ENST00000365559 GDF15Q99988 308 aa3.82□□□□□ -1.8
RNU4-48P-201ENST00000365559 MAGEB5Q9BZ81 275 aa3.82□□□□□ -1.8
RNU4-48P-201ENST00000365559 MGAT4CQ9UBM8 478 aa3.82□□□□□ -1.8
RNU4-48P-201ENST00000365559 NKX1-2Q9UD57 310 aaPredicted RBP3.82□□□□□ -1.8
RNU4-48P-201ENST00000365559 MAN2B2Q9Y2E5 1009 aa3.82□□□□□ -1.8
RNU4-48P-201ENST00000365559 COL15A1P39059 1388 aa3.81□□□□□ -1.8
RNU4-48P-201ENST00000365559 PRRT4C9JH25 899 aa3.81□□□□□ -1.8
RNU4-48P-201ENST00000365559 H7C1Q1 480 aa3.81□□□□□ -1.8
RNU4-48P-201ENST00000365559 FGF18O76093 207 aa3.81□□□□□ -1.8
RNU4-48P-201ENST00000365559 MYL4P12829 197 aa3.81□□□□□ -1.8
RNU4-48P-201ENST00000365559 APEHP13798 732 aaKnown RBP3.81□□□□□ -1.8
RNU4-48P-201ENST00000365559 COPB1P53618 953 aaKnown RBP3.81□□□□□ -1.8
RNU4-48P-201ENST00000365559 SLC35G1Q2M3R5 365 aa3.81□□□□□ -1.8
RNU4-48P-201ENST00000365559 RAP1GAP2Q684P5 730 aa3.81□□□□□ -1.8
RNU4-48P-201ENST00000365559 ABLIM2Q6H8Q1 611 aa3.81□□□□□ -1.8
RNU4-48P-201ENST00000365559 ZNF66Q6ZN08 573 aa3.81□□□□□ -1.8
RNU4-48P-201ENST00000365559 CCDC28AQ8IWP9 274 aa3.81□□□□□ -1.8
RNU4-48P-201ENST00000365559 TXLNBQ8N3L3 684 aa3.81□□□□□ -1.8
RNU4-48P-201ENST00000365559 FSTL5Q8N475 847 aaPredicted RBP3.81□□□□□ -1.8
RNU4-48P-201ENST00000365559 PNLDC1Q8NA58 520 aaKnown RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms