RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 SERPINB13Q9UIV8 391 aa2.76□□□□□ -1.97
RNU6-238P-201ENST00000363313 USP22Q9UPT9 525 aa2.76□□□□□ -1.97
RNU6-238P-201ENST00000363313 MRPS17Q9Y2R5 130 aaKnown RBP2.76□□□□□ -1.97
RNU6-238P-201ENST00000363313 MED16Q9Y2X0 877 aa2.76□□□□□ -1.97
RNU6-238P-201ENST00000363313 SNX14Q9Y5W7 946 aa2.76□□□□□ -1.97
RNU6-238P-201ENST00000363313 SHTN1A0MZ66 631 aa2.75□□□□□ -1.97
RNU6-238P-201ENST00000363313 LRRC14BA6NHZ5 514 aa2.75□□□□□ -1.97
RNU6-238P-201ENST00000363313 MYO1CO00159 1063 aa2.75□□□□□ -1.97
RNU6-238P-201ENST00000363313 INPPL1O15357 1258 aa2.75□□□□□ -1.97
RNU6-238P-201ENST00000363313 XPOTO43592 962 aaKnown RBP2.75□□□□□ -1.97
RNU6-238P-201ENST00000363313 PLA2G2AP14555 144 aa2.75□□□□□ -1.97
RNU6-238P-201ENST00000363313 ADORA2AP29274 412 aa2.75□□□□□ -1.97
RNU6-238P-201ENST00000363313 EPHA3P29320 983 aa2.75□□□□□ -1.97
RNU6-238P-201ENST00000363313 MLH1P40692 756 aa2.75□□□□□ -1.97
RNU6-238P-201ENST00000363313 SLC12A2P55011 1212 aa2.75□□□□□ -1.97
RNU6-238P-201ENST00000363313 EXOSC9Q06265 439 aaKnown RBP2.75□□□□□ -1.97
RNU6-238P-201ENST00000363313 PFKFB3Q16875 520 aaPredicted RBP2.75□□□□□ -1.97
RNU6-238P-201ENST00000363313 LY6KQ17RY6 165 aa2.75□□□□□ -1.97
RNU6-238P-201ENST00000363313 HIST2H2BCQ6DN03 193 aa2.75□□□□□ -1.97
RNU6-238P-201ENST00000363313 ZNF793Q6ZN11 406 aa2.75□□□□□ -1.97
RNU6-238P-201ENST00000363313 FAM57BQ71RH2 274 aa2.75□□□□□ -1.97
RNU6-238P-201ENST00000363313 MIER2Q8N344 545 aa2.75□□□□□ -1.97
RNU6-238P-201ENST00000363313 C12orf76Q8N812 135 aaPredicted RBP2.75□□□□□ -1.97
RNU6-238P-201ENST00000363313 SLC44A5Q8NCS7 719 aa2.75□□□□□ -1.97
RNU6-238P-201ENST00000363313 SLC13A1Q9BZW2 595 aa2.75□□□□□ -1.97
RNU6-238P-201ENST00000363313 SARS2Q9NP81 518 aaKnown RBP2.75□□□□□ -1.97
RNU6-238P-201ENST00000363313 FZD3Q9NPG1 666 aa2.75□□□□□ -1.97
RNU6-238P-201ENST00000363313 PCDHA12Q9UN75 941 aa2.75□□□□□ -1.97
RNU6-238P-201ENST00000363313 DRG1Q9Y295 367 aaKnown RBP2.75□□□□□ -1.97
RNU6-238P-201ENST00000363313 PCDHA1Q9Y5I3 950 aa2.75□□□□□ -1.97
RNU6-238P-201ENST00000363313 TRIP12Q14669 1992 aaPredicted RBP2.74□□□□□ -1.97
RNU6-238P-201ENST00000363313 ZNF335Q9H4Z2 1342 aaPredicted RBP2.74□□□□□ -1.97
RNU6-238P-201ENST00000363313 PRPF4O43172 522 aaKnown RBP eCLIP2.74□□□□□ -1.97
RNU6-238P-201ENST00000363313 ZC3H11AO75152 810 aaKnown RBP eCLIP2.74□□□□□ -1.97
RNU6-238P-201ENST00000363313 NDUFB8O95169 186 aa2.74□□□□□ -1.97
RNU6-238P-201ENST00000363313 CREB1P16220 341 aa2.74□□□□□ -1.97
RNU6-238P-201ENST00000363313 HDCP19113 662 aa2.74□□□□□ -1.97
RNU6-238P-201ENST00000363313 PRKAR1BP31321 381 aa2.74□□□□□ -1.97
RNU6-238P-201ENST00000363313 IARSP41252 1262 aaKnown RBP2.74□□□□□ -1.97
RNU6-238P-201ENST00000363313 ENTPD1P49961 510 aa2.74□□□□□ -1.97
RNU6-238P-201ENST00000363313 RRP1P56182 461 aaKnown RBP2.74□□□□□ -1.97
RNU6-238P-201ENST00000363313 SOX8P57073 446 aa2.74□□□□□ -1.97
RNU6-238P-201ENST00000363313 NKX6-1P78426 367 aaPredicted RBP2.74□□□□□ -1.97
RNU6-238P-201ENST00000363313 KRT17Q04695 432 aa2.74□□□□□ -1.97
RNU6-238P-201ENST00000363313 MLC1Q15049 377 aa2.74□□□□□ -1.97
RNU6-238P-201ENST00000363313 CC2D1BQ5T0F9 858 aaKnown RBP2.74□□□□□ -1.97
RNU6-238P-201ENST00000363313 SYDE2Q5VT97 1194 aa2.74□□□□□ -1.97
RNU6-238P-201ENST00000363313 TRAPPC11Q7Z392 1133 aa2.74□□□□□ -1.97
RNU6-238P-201ENST00000363313 ZNF329Q86UD4 541 aa2.74□□□□□ -1.97
RNU6-238P-201ENST00000363313 MIB2Q96AX9 1013 aa2.74□□□□□ -1.97
RNU6-238P-201ENST00000363313 KAZALD1Q96I82 304 aa2.74□□□□□ -1.97
RNU6-238P-201ENST00000363313 LMLNQ96KR4 655 aa2.74□□□□□ -1.97
RNU6-238P-201ENST00000363313 SF3B5Q9BWJ5 86 aaKnown RBP2.74□□□□□ -1.97
RNU6-238P-201ENST00000363313 ZSCAN32Q9NX65 697 aa2.74□□□□□ -1.97
RNU6-238P-201ENST00000363313 ICAM5Q9UMF0 924 aa2.74□□□□□ -1.97
RNU6-238P-201ENST00000363313 TBX22Q9Y458 520 aa2.74□□□□□ -1.97
RNU6-238P-201ENST00000363313 FER1L4A9Z1Z3 1794 aa2.74□□□□□ -1.97
RNU6-238P-201ENST00000363313 C2CD4BA6NLJ0 364 aa2.73□□□□□ -1.97
RNU6-238P-201ENST00000363313 F8W810 466 aa2.73□□□□□ -1.97
RNU6-238P-201ENST00000363313 CLIC1O00299 241 aa2.73□□□□□ -1.97
RNU6-238P-201ENST00000363313 PLGP00747 810 aaPredicted RBP2.73□□□□□ -1.97
RNU6-238P-201ENST00000363313 FTLP02792 175 aaPredicted RBP2.73□□□□□ -1.97
RNU6-238P-201ENST00000363313 HOXB2P14652 356 aa2.73□□□□□ -1.97
RNU6-238P-201ENST00000363313 PDCP20941 246 aa2.73□□□□□ -1.97
RNU6-238P-201ENST00000363313 PRKAG1P54619 331 aa2.73□□□□□ -1.97
RNU6-238P-201ENST00000363313 P2RX3P56373 397 aa2.73□□□□□ -1.97
RNU6-238P-201ENST00000363313 TIRAPP58753 221 aa2.73□□□□□ -1.97
RNU6-238P-201ENST00000363313 YPEL5P62699 121 aa2.73□□□□□ -1.97
RNU6-238P-201ENST00000363313 AWAT1Q58HT5 328 aa2.73□□□□□ -1.97
RNU6-238P-201ENST00000363313 OTUD3Q5T2D3 398 aaPredicted RBP2.73□□□□□ -1.97
RNU6-238P-201ENST00000363313 NADSYN1Q6IA69 706 aa2.73□□□□□ -1.97
RNU6-238P-201ENST00000363313 DPY19L3Q6ZPD9 716 aa2.73□□□□□ -1.97
RNU6-238P-201ENST00000363313 ZNF280BQ86YH2 543 aa2.73□□□□□ -1.97
RNU6-238P-201ENST00000363313 ELP5Q8TE02 316 aa2.73□□□□□ -1.97
RNU6-238P-201ENST00000363313 WBP2Q969T9 261 aa2.73□□□□□ -1.97
RNU6-238P-201ENST00000363313 EDC3Q96F86 508 aaKnown RBP2.73□□□□□ -1.97
RNU6-238P-201ENST00000363313 TRIM5Q9C035 493 aa2.73□□□□□ -1.97
RNU6-238P-201ENST00000363313 XPNPEP3Q9NQH7 507 aa2.73□□□□□ -1.97
RNU6-238P-201ENST00000363313 SEMA5BQ9P283 1151 aa2.73□□□□□ -1.97
RNU6-238P-201ENST00000363313 PAXBP1Q9Y5B6 917 aa2.73□□□□□ -1.97
RNU6-238P-201ENST00000363313 A8MVJ9 347 aa2.72□□□□□ -1.97
RNU6-238P-201ENST00000363313 CAMTA2O94983 1202 aa2.72□□□□□ -1.97
RNU6-238P-201ENST00000363313 PLAUP00749 431 aa2.72□□□□□ -1.97
RNU6-238P-201ENST00000363313 CNGA1P29973 690 aa2.72□□□□□ -1.97
RNU6-238P-201ENST00000363313 SLC11A2P49281 568 aa2.72□□□□□ -1.97
RNU6-238P-201ENST00000363313 MAP2K6P52564 334 aa2.72□□□□□ -1.97
RNU6-238P-201ENST00000363313 UCP3P55916 312 aa2.72□□□□□ -1.97
RNU6-238P-201ENST00000363313 KRTAP10-12P60413 245 aa2.72□□□□□ -1.97
RNU6-238P-201ENST00000363313 DDR1Q08345 913 aa2.72□□□□□ -1.97
RNU6-238P-201ENST00000363313 PLS1Q14651 629 aa2.72□□□□□ -1.97
RNU6-238P-201ENST00000363313 MFSD13AQ14CX5 517 aa2.72□□□□□ -1.97
RNU6-238P-201ENST00000363313 ZIK1Q3SY52 487 aaPredicted RBP2.72□□□□□ -1.97
RNU6-238P-201ENST00000363313 NPNTQ6UXI9 565 aa2.72□□□□□ -1.97
RNU6-238P-201ENST00000363313 SLC39A5Q6ZMH5 540 aa2.72□□□□□ -1.97
RNU6-238P-201ENST00000363313 USP45Q70EL2 814 aa2.72□□□□□ -1.97
RNU6-238P-201ENST00000363313 NR2C2APQ86WQ0 139 aa2.72□□□□□ -1.97
RNU6-238P-201ENST00000363313 SPARTQ8N0X7 666 aa2.72□□□□□ -1.97
RNU6-238P-201ENST00000363313 NEUROG1Q92886 237 aa2.72□□□□□ -1.97
RNU6-238P-201ENST00000363313 PPP2R3CQ969Q6 453 aa2.72□□□□□ -1.97
RNU6-238P-201ENST00000363313 MTFMTQ96DP5 389 aaKnown RBP2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms