RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 ADORA2BP29275 332 aa23.58■■□□□ 1.36
LDB1-201ENST00000361198 SDC4P31431 198 aa23.58■■□□□ 1.36
LDB1-201ENST00000361198 ANKRD22Q5VYY1 191 aa23.58■■□□□ 1.36
LDB1-201ENST00000361198 PPP1R21Q6ZMI0 780 aa23.58■■□□□ 1.36
LDB1-201ENST00000361198 SPATA21Q7Z572 469 aa23.58■■□□□ 1.36
LDB1-201ENST00000361198 ZBED8Q8IZ13 594 aa23.58■■□□□ 1.36
LDB1-201ENST00000361198 CRYBG2Q8N1P7 616 aa23.58■■□□□ 1.36
LDB1-201ENST00000361198 TAB3Q8N5C8 712 aaPredicted RBP23.58■■□□□ 1.36
LDB1-201ENST00000361198 FAM71DQ8N9W8 422 aa23.58■■□□□ 1.36
LDB1-201ENST00000361198 CLEC4CQ8WTT0 213 aa23.58■■□□□ 1.36
LDB1-201ENST00000361198 APBA2Q99767 749 aa23.58■■□□□ 1.36
LDB1-201ENST00000361198 NCAPGQ9BPX3 1015 aa23.58■■□□□ 1.36
LDB1-201ENST00000361198 TACO1Q9BSH4 297 aaKnown RBP23.58■■□□□ 1.36
LDB1-201ENST00000361198 MLXIPLQ9NP71 852 aa23.58■■□□□ 1.36
LDB1-201ENST00000361198 GPATCH2LQ9NWQ4 482 aa23.58■■□□□ 1.36
LDB1-201ENST00000361198 GDAP2Q9NXN4 497 aa23.58■■□□□ 1.36
LDB1-201ENST00000361198 MCF2LO15068 1137 aa23.57■■□□□ 1.36
LDB1-201ENST00000361198 HOXC8P31273 242 aa23.57■■□□□ 1.36
LDB1-201ENST00000361198 STX2P32856 288 aa23.57■■□□□ 1.36
LDB1-201ENST00000361198 NRLP54845 237 aa23.57■■□□□ 1.36
LDB1-201ENST00000361198 BNIP1Q12981 228 aa23.57■■□□□ 1.36
LDB1-201ENST00000361198 ZC3H12AQ5D1E8 599 aaKnown RBP23.57■■□□□ 1.36
LDB1-201ENST00000361198 PCGF5Q86SE9 256 aa23.57■■□□□ 1.36
LDB1-201ENST00000361198 SRRM1Q8IYB3 904 aaKnown RBP23.57■■□□□ 1.36
LDB1-201ENST00000361198 ZNF560Q96MR9 790 aa23.57■■□□□ 1.36
LDB1-201ENST00000361198 MYADML2A6NDP7 307 aa23.57■■□□□ 1.36
LDB1-201ENST00000361198 ALOX15BO15296 676 aa23.57■■□□□ 1.36
LDB1-201ENST00000361198 BANF1O75531 89 aa23.57■■□□□ 1.36
LDB1-201ENST00000361198 ATP6V1G2O95670 118 aa23.57■■□□□ 1.36
LDB1-201ENST00000361198 IL4RP24394 825 aa23.57■■□□□ 1.36
LDB1-201ENST00000361198 SLC8A1P32418 973 aa23.57■■□□□ 1.36
LDB1-201ENST00000361198 ZC3H18Q86VM9 953 aaKnown RBP23.57■■□□□ 1.36
LDB1-201ENST00000361198 TDRPQ86YL5 185 aa23.57■■□□□ 1.36
LDB1-201ENST00000361198 PPIL6Q8IXY8 311 aa23.57■■□□□ 1.36
LDB1-201ENST00000361198 ANKRD52Q8NB46 1076 aa23.57■■□□□ 1.36
LDB1-201ENST00000361198 GDAP1Q8TB36 358 aa23.57■■□□□ 1.36
LDB1-201ENST00000361198 TTC25Q96NG3 672 aa23.57■■□□□ 1.36
LDB1-201ENST00000361198 RNF157Q96PX1 679 aa23.57■■□□□ 1.36
LDB1-201ENST00000361198 TGS1Q96RS0 853 aaKnown RBP23.57■■□□□ 1.36
LDB1-201ENST00000361198 NMRK2Q9NPI5 230 aa23.57■■□□□ 1.36
LDB1-201ENST00000361198 NKIRAS1Q9NYS0 192 aa23.57■■□□□ 1.36
LDB1-201ENST00000361198 NDC80O14777 642 aa23.56■■□□□ 1.36
LDB1-201ENST00000361198 XPOTO43592 962 aaKnown RBP23.56■■□□□ 1.36
LDB1-201ENST00000361198 TFE3P19532 575 aaPredicted RBP23.56■■□□□ 1.36
LDB1-201ENST00000361198 TAF6P49848 677 aa23.56■■□□□ 1.36
LDB1-201ENST00000361198 NCALDP61601 193 aa23.56■■□□□ 1.36
LDB1-201ENST00000361198 BST2Q10589 180 aaKnown RBP23.56■■□□□ 1.36
LDB1-201ENST00000361198 PDIA2Q13087 525 aaKnown RBP23.56■■□□□ 1.36
LDB1-201ENST00000361198 KRT81Q14533 505 aa23.56■■□□□ 1.36
LDB1-201ENST00000361198 NOMO1Q15155 1222 aa23.56■■□□□ 1.36
LDB1-201ENST00000361198 BOLA3Q53S33 107 aa23.56■■□□□ 1.36
LDB1-201ENST00000361198 CENPUQ71F23 418 aa23.56■■□□□ 1.36
LDB1-201ENST00000361198 RPAINQ86UA6 219 aa23.56■■□□□ 1.36
LDB1-201ENST00000361198 IFNL1Q8IU54 200 aa23.56■■□□□ 1.36
LDB1-201ENST00000361198 NME8Q8N427 588 aa23.56■■□□□ 1.36
LDB1-201ENST00000361198 NAT8LQ8N9F0 302 aa23.56■■□□□ 1.36
LDB1-201ENST00000361198 TNPO2O14787 897 aaKnown RBP23.56■■□□□ 1.36
LDB1-201ENST00000361198 PNPLA4P41247 253 aa23.56■■□□□ 1.36
LDB1-201ENST00000361198 NR1H3Q13133 447 aa23.56■■□□□ 1.36
LDB1-201ENST00000361198 CAPN12Q6ZSI9 719 aa23.56■■□□□ 1.36
LDB1-201ENST00000361198 APPL2Q8NEU8 664 aa23.56■■□□□ 1.36
LDB1-201ENST00000361198 SNX25Q9H3E2 840 aa23.56■■□□□ 1.36
LDB1-201ENST00000361198 RASA4BC9J798 803 aa23.55■■□□□ 1.36
LDB1-201ENST00000361198 RASA4O43374 803 aa23.55■■□□□ 1.36
LDB1-201ENST00000361198 GNAT1P11488 350 aa23.55■■□□□ 1.36
LDB1-201ENST00000361198 GCAP28676 217 aa23.55■■□□□ 1.36
LDB1-201ENST00000361198 BCAT1P54687 386 aa23.55■■□□□ 1.36
LDB1-201ENST00000361198 HDAC4P56524 1084 aa23.55■■□□□ 1.36
LDB1-201ENST00000361198 TFDP2Q14188 446 aa23.55■■□□□ 1.36
LDB1-201ENST00000361198 HIF1AQ16665 826 aa23.55■■□□□ 1.36
LDB1-201ENST00000361198 CA9Q16790 459 aa23.55■■□□□ 1.36
LDB1-201ENST00000361198 TWF2Q6IBS0 349 aaKnown RBP23.55■■□□□ 1.36
LDB1-201ENST00000361198 ZDHHC17Q8IUH5 632 aa23.55■■□□□ 1.36
LDB1-201ENST00000361198 MAP7D3Q8IWC1 876 aa23.55■■□□□ 1.36
LDB1-201ENST00000361198 GRAMD1AQ96CP6 724 aa23.55■■□□□ 1.36
LDB1-201ENST00000361198 SNRNP25Q9BV90 132 aaKnown RBP23.55■■□□□ 1.36
LDB1-201ENST00000361198 UBN1Q9NPG3 1134 aa23.55■■□□□ 1.36
LDB1-201ENST00000361198 EXOC1LA0A1B0GW35 172 aa23.54■■□□□ 1.36
LDB1-201ENST00000361198 TCRBV7S3A2A0A539 114 aa23.54■■□□□ 1.36
LDB1-201ENST00000361198 SLC18A1P54219 525 aa23.54■■□□□ 1.36
LDB1-201ENST00000361198 SNX16P57768 344 aa23.54■■□□□ 1.36
LDB1-201ENST00000361198 PDK2Q15119 407 aa23.54■■□□□ 1.36
LDB1-201ENST00000361198 MTFR1Q15390 333 aa23.54■■□□□ 1.36
LDB1-201ENST00000361198 FAM47CQ5HY64 1035 aa23.54■■□□□ 1.36
LDB1-201ENST00000361198 CGB2Q6NT52 195 aa23.54■■□□□ 1.36
LDB1-201ENST00000361198 LIMS2Q7Z4I7 341 aa23.54■■□□□ 1.36
LDB1-201ENST00000361198 SLC2A14Q8TDB8 520 aa23.54■■□□□ 1.36
LDB1-201ENST00000361198 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.54■■□□□ 1.36
LDB1-201ENST00000361198 SOCS4Q8WXH5 440 aa23.54■■□□□ 1.36
LDB1-201ENST00000361198 ADAM33Q9BZ11 813 aa23.54■■□□□ 1.36
LDB1-201ENST00000361198 RXFP1Q9HBX9 757 aa23.54■■□□□ 1.36
LDB1-201ENST00000361198 NOD2Q9HC29 1040 aa23.54■■□□□ 1.36
LDB1-201ENST00000361198 FAM47DPA6NHR8 397 aa23.54■■□□□ 1.36
LDB1-201ENST00000361198 C6orf222P0C671 652 aaPredicted RBP23.54■■□□□ 1.36
LDB1-201ENST00000361198 LCP1P13796 627 aa23.54■■□□□ 1.36
LDB1-201ENST00000361198 TAC1P20366 129 aa23.54■■□□□ 1.36
LDB1-201ENST00000361198 CTGFP29279 349 aa23.54■■□□□ 1.36
LDB1-201ENST00000361198 LILRA4P59901 499 aa23.54■■□□□ 1.36
LDB1-201ENST00000361198 MSS51Q4VC12 460 aa23.54■■□□□ 1.36
LDB1-201ENST00000361198 FNBP1LQ5T0N5 605 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms