RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 IL6STP40189 918 aaPredicted RBP9.58□□□□□ -0.88
VPS13A-203ENST00000360280 PDPK2PQ6A1A2 396 aa9.58□□□□□ -0.88
VPS13A-203ENST00000360280 SNRNP48Q6IEG0 339 aaKnown RBP9.58□□□□□ -0.88
VPS13A-203ENST00000360280 HAUS6Q7Z4H7 955 aa9.58□□□□□ -0.88
VPS13A-203ENST00000360280 SLC30A5Q8TAD4 765 aa9.58□□□□□ -0.88
VPS13A-203ENST00000360280 ZNF671Q8TAW3 534 aa9.58□□□□□ -0.88
VPS13A-203ENST00000360280 TRPC4APQ8TEL6 797 aa9.58□□□□□ -0.88
VPS13A-203ENST00000360280 FAM120BQ96EK7 910 aaKnown RBP9.58□□□□□ -0.88
VPS13A-203ENST00000360280 MROH7Q68CQ1 1323 aa9.57□□□□□ -0.88
VPS13A-203ENST00000360280 A0A087WXM4 84 aa9.57□□□□□ -0.88
VPS13A-203ENST00000360280 ERVK-10P10266 1014 aa9.57□□□□□ -0.88
VPS13A-203ENST00000360280 MUTP22033 750 aa9.57□□□□□ -0.88
VPS13A-203ENST00000360280 MAPK7Q13164 816 aa9.57□□□□□ -0.88
VPS13A-203ENST00000360280 ZNF669Q96BR6 464 aaPredicted RBP9.57□□□□□ -0.88
VPS13A-203ENST00000360280 SPATA33Q96N06 139 aa9.57□□□□□ -0.88
VPS13A-203ENST00000360280 CAPN10Q9HC96 672 aa9.57□□□□□ -0.88
VPS13A-203ENST00000360280 IRAK3Q9Y616 596 aa9.57□□□□□ -0.88
VPS13A-203ENST00000360280 TEX46H3BTG2 121 aa9.57□□□□□ -0.88
VPS13A-203ENST00000360280 GPD1P21695 349 aa9.57□□□□□ -0.88
VPS13A-203ENST00000360280 EIF2S3P41091 472 aaKnown RBP9.57□□□□□ -0.88
VPS13A-203ENST00000360280 XRCC4Q13426 336 aa9.57□□□□□ -0.88
VPS13A-203ENST00000360280 POLD3Q15054 466 aaPredicted RBP9.57□□□□□ -0.88
VPS13A-203ENST00000360280 NT5DC4Q86YG4 428 aa9.57□□□□□ -0.88
VPS13A-203ENST00000360280 SLC38A7Q9NVC3 462 aa9.57□□□□□ -0.88
VPS13A-203ENST00000360280 E2F8A0AVK6 867 aa9.57□□□□□ -0.88
VPS13A-203ENST00000360280 VAV1P15498 845 aa9.57□□□□□ -0.88
VPS13A-203ENST00000360280 LBPP18428 481 aa9.57□□□□□ -0.88
VPS13A-203ENST00000360280 UNC5CLQ8IV45 518 aa9.57□□□□□ -0.88
VPS13A-203ENST00000360280 SUPT7LO94864 414 aa9.57□□□□□ -0.88
VPS13A-203ENST00000360280 RASA1P20936 1047 aa9.57□□□□□ -0.88
VPS13A-203ENST00000360280 TRAP1Q12931 704 aaKnown RBP9.57□□□□□ -0.88
VPS13A-203ENST00000360280 DGKDQ16760 1214 aa9.57□□□□□ -0.88
VPS13A-203ENST00000360280 INO80DQ53TQ3 878 aaPredicted RBP9.57□□□□□ -0.88
VPS13A-203ENST00000360280 FOXP4Q8IVH2 680 aaPredicted RBP9.57□□□□□ -0.88
VPS13A-203ENST00000360280 NLGN1Q8N2Q7 840 aa9.57□□□□□ -0.88
VPS13A-203ENST00000360280 USP17L8P0C7I0 530 aa9.57□□□□□ -0.88
VPS13A-203ENST00000360280 UCHL3P15374 230 aa9.57□□□□□ -0.88
VPS13A-203ENST00000360280 TCF4P15884 667 aa9.57□□□□□ -0.88
VPS13A-203ENST00000360280 NT5C1AQ9BXI3 368 aa9.57□□□□□ -0.88
VPS13A-203ENST00000360280 AKAP7Q9P0M2 348 aaPredicted RBP9.57□□□□□ -0.88
VPS13A-203ENST00000360280 RBP1P09455 135 aa9.57□□□□□ -0.88
VPS13A-203ENST00000360280 HSD17B3P37058 310 aa9.57□□□□□ -0.88
VPS13A-203ENST00000360280 CLYBLQ8N0X4 340 aa9.57□□□□□ -0.88
VPS13A-203ENST00000360280 MYO1HQ8N1T3 1032 aa9.57□□□□□ -0.88
VPS13A-203ENST00000360280 MYLPFQ96A32 169 aa9.57□□□□□ -0.88
VPS13A-203ENST00000360280 NEK6Q9HC98 313 aa9.57□□□□□ -0.88
VPS13A-203ENST00000360280 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.57□□□□□ -0.88
VPS13A-203ENST00000360280 KPNA5O15131 536 aa9.57□□□□□ -0.88
VPS13A-203ENST00000360280 DEFB107AQ8IZN7 70 aa9.57□□□□□ -0.88
VPS13A-203ENST00000360280 B3GALT6Q96L58 329 aa9.57□□□□□ -0.88
VPS13A-203ENST00000360280 TMEM138Q9NPI0 162 aa9.57□□□□□ -0.88
VPS13A-203ENST00000360280 NDUFB5O43674 189 aa9.57□□□□□ -0.88
VPS13A-203ENST00000360280 OR6B1O95007 311 aa9.57□□□□□ -0.88
VPS13A-203ENST00000360280 OR2W6PQ8NHA6 318 aa9.57□□□□□ -0.88
VPS13A-203ENST00000360280 STIP1P31948 543 aaKnown RBP9.57□□□□□ -0.88
VPS13A-203ENST00000360280 PPP1R14BQ96C90 147 aa9.57□□□□□ -0.88
VPS13A-203ENST00000360280 ADAM33Q9BZ11 813 aa9.57□□□□□ -0.88
VPS13A-203ENST00000360280 CLPBQ9H078 707 aa9.57□□□□□ -0.88
VPS13A-203ENST00000360280 A0A087X0T9 212 aa9.57□□□□□ -0.88
VPS13A-203ENST00000360280 DDI2Q5TDH0 399 aa9.57□□□□□ -0.88
VPS13A-203ENST00000360280 RASSF6Q6ZTQ3 369 aa9.57□□□□□ -0.88
VPS13A-203ENST00000360280 EMILIN2Q9BXX0 1053 aa9.57□□□□□ -0.88
VPS13A-203ENST00000360280 USP17L5A8MUK1 530 aa9.57□□□□□ -0.88
VPS13A-203ENST00000360280 RFX3P48380 749 aa9.57□□□□□ -0.88
VPS13A-203ENST00000360280 SLC44A2Q8IWA5 706 aaPredicted RBP9.57□□□□□ -0.88
VPS13A-203ENST00000360280 PGBD3Q8N328 593 aa9.57□□□□□ -0.88
VPS13A-203ENST00000360280 ASB14A6NK59 587 aa9.57□□□□□ -0.88
VPS13A-203ENST00000360280 TUBA4AP68366 448 aa9.57□□□□□ -0.88
VPS13A-203ENST00000360280 TIGD7Q6NT04 549 aaPredicted RBP9.57□□□□□ -0.88
VPS13A-203ENST00000360280 CAMK1DQ8IU85 385 aa9.57□□□□□ -0.88
VPS13A-203ENST00000360280 AP3M1Q9Y2T2 418 aa9.57□□□□□ -0.88
VPS13A-203ENST00000360280 MYH15Q9Y2K3 1946 aa9.57□□□□□ -0.88
VPS13A-203ENST00000360280 UBDO15205 165 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 RARBP10826 455 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 PCSK1P29120 753 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 SEC24CP53992 1094 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 RAB25P57735 213 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 LRRC17Q8N6Y2 441 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 PCDHB2Q9Y5E7 798 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 CCDC189A1A4V9 331 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 ERN1O75460 977 aaKnown RBP9.56□□□□□ -0.88
VPS13A-203ENST00000360280 ATN1P54259 1190 aaPredicted RBP9.56□□□□□ -0.88
VPS13A-203ENST00000360280 MYBPC2Q14324 1141 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 AMER2Q8N7J2 671 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 TRPV3Q8NET8 790 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 EURLQ9NYK6 297 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 NR3C2P08235 984 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 SRGNP10124 158 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 SKP1P63208 163 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 DCAF6Q58WW2 860 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 NEK5Q6P3R8 708 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 ABRAXAS1Q6UWZ7 409 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 SLC25A41Q8N5S1 370 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 PPP1R10Q96QC0 940 aaKnown RBP9.56□□□□□ -0.88
VPS13A-203ENST00000360280 TMEM120AQ9BXJ8 343 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 TADA2AO75478 443 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 DDHD2O94830 711 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 SNRNP35Q16560 246 aaKnown RBP9.56□□□□□ -0.88
VPS13A-203ENST00000360280 WDR93Q6P2C0 686 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 TMEM132CQ8N3T6 1108 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms