RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 C4orf32Q8N8J7 132 aa14.17□□□□□ -0.14
VCP-201ENST00000358901 COLGALT1Q8NBJ5 622 aa14.17□□□□□ -0.14
VCP-201ENST00000358901 HIST1H2AHQ96KK5 128 aa14.17□□□□□ -0.14
VCP-201ENST00000358901 HIST1H2AJQ99878 128 aa14.17□□□□□ -0.14
VCP-201ENST00000358901 H2AFJQ9BTM1 129 aa14.17□□□□□ -0.14
VCP-201ENST00000358901 MYLK2Q9H1R3 596 aa14.17□□□□□ -0.14
VCP-201ENST00000358901 IRAK4Q9NWZ3 460 aa14.17□□□□□ -0.14
VCP-201ENST00000358901 TSPAN16Q9UKR8 245 aa14.17□□□□□ -0.14
VCP-201ENST00000358901 ACOT9Q9Y305 439 aa14.17□□□□□ -0.14
VCP-201ENST00000358901 SNX13Q9Y5W8 968 aa14.17□□□□□ -0.14
VCP-201ENST00000358901 RRN3P2A6NIE6 340 aa14.17□□□□□ -0.14
VCP-201ENST00000358901 PCYT1AP49585 367 aa14.17□□□□□ -0.14
VCP-201ENST00000358901 CXCL9Q07325 125 aa14.17□□□□□ -0.14
VCP-201ENST00000358901 MGAT5Q09328 741 aa14.17□□□□□ -0.14
VCP-201ENST00000358901 ZNF555Q8NEP9 628 aa14.17□□□□□ -0.14
VCP-201ENST00000358901 MAN1A2O60476 641 aa14.16□□□□□ -0.14
VCP-201ENST00000358901 RHOBTB1O94844 696 aa14.16□□□□□ -0.14
VCP-201ENST00000358901 KCNA4P22459 653 aa14.16□□□□□ -0.14
VCP-201ENST00000358901 ELF3P78545 371 aaPredicted RBP14.16□□□□□ -0.14
VCP-201ENST00000358901 PLIN5Q00G26 463 aa14.16□□□□□ -0.14
VCP-201ENST00000358901 N4BP2L1Q5TBK1 243 aaPredicted RBP14.16□□□□□ -0.14
VCP-201ENST00000358901 TTC33Q6PID6 262 aaPredicted RBP14.16□□□□□ -0.14
VCP-201ENST00000358901 MFN1Q8IWA4 741 aa14.16□□□□□ -0.14
VCP-201ENST00000358901 ZCCHC9Q8N567 271 aaKnown RBP14.16□□□□□ -0.14
VCP-201ENST00000358901 ZNF229Q9UJW7 825 aa14.16□□□□□ -0.14
VCP-201ENST00000358901 BLOC1S6Q9UL45 172 aa14.16□□□□□ -0.14
VCP-201ENST00000358901 PRG3Q9Y2Y8 225 aaPredicted RBP14.16□□□□□ -0.14
VCP-201ENST00000358901 ATP9AO75110 1047 aa14.16□□□□□ -0.14
VCP-201ENST00000358901 PSMD10O75832 226 aa14.16□□□□□ -0.14
VCP-201ENST00000358901 CYP3A4P08684 503 aa14.16□□□□□ -0.14
VCP-201ENST00000358901 MIPP30301 263 aa14.16□□□□□ -0.14
VCP-201ENST00000358901 NDST1P52848 882 aa14.16□□□□□ -0.14
VCP-201ENST00000358901 TAF1CQ15572 869 aaPredicted RBP14.16□□□□□ -0.14
VCP-201ENST00000358901 ATP13A4Q4VNC1 1196 aa14.16□□□□□ -0.14
VCP-201ENST00000358901 PTRHD1Q6GMV3 140 aaKnown RBP14.16□□□□□ -0.14
VCP-201ENST00000358901 OR9Q1Q8NGQ5 310 aa14.16□□□□□ -0.14
VCP-201ENST00000358901 BLOC1S5Q8TDH9 187 aa14.16□□□□□ -0.14
VCP-201ENST00000358901 CKAP2Q8WWK9 683 aa14.16□□□□□ -0.14
VCP-201ENST00000358901 ALG3Q92685 438 aa14.16□□□□□ -0.14
VCP-201ENST00000358901 SEPT5Q99719 369 aaPredicted RBP14.16□□□□□ -0.14
VCP-201ENST00000358901 LAMB3Q13751 1172 aa14.16□□□□□ -0.14
VCP-201ENST00000358901 MGAT5BQ3V5L5 792 aa14.16□□□□□ -0.14
VCP-201ENST00000358901 AASDHQ4L235 1098 aaPredicted RBP14.16□□□□□ -0.14
VCP-201ENST00000358901 GNASQ5JWF2 1037 aa14.16□□□□□ -0.14
VCP-201ENST00000358901 DUPD1Q68J44 220 aa14.16□□□□□ -0.14
VCP-201ENST00000358901 GLB1LQ6UWU2 654 aa14.16□□□□□ -0.14
VCP-201ENST00000358901 METTL7BQ6UX53 244 aa14.16□□□□□ -0.14
VCP-201ENST00000358901 YTHDF3Q7Z739 585 aaKnown RBP14.16□□□□□ -0.14
VCP-201ENST00000358901 ANKRD13AQ8IZ07 590 aa14.16□□□□□ -0.14
VCP-201ENST00000358901 ZNF786Q8N393 782 aa14.16□□□□□ -0.14
VCP-201ENST00000358901 GFM2Q969S9 779 aaKnown RBP14.16□□□□□ -0.14
VCP-201ENST00000358901 PPP1R2P1Q96PQ5 205 aa14.16□□□□□ -0.14
VCP-201ENST00000358901 BTBD10Q9BSF8 475 aa14.16□□□□□ -0.14
VCP-201ENST00000358901 COG4Q9H9E3 785 aa14.16□□□□□ -0.14
VCP-201ENST00000358901 CHCHD3Q9NX63 227 aaKnown RBP14.16□□□□□ -0.14
VCP-201ENST00000358901 FKBP9O95302 570 aa14.15□□□□□ -0.14
VCP-201ENST00000358901 ZNF268Q14587 947 aaPredicted RBP14.15□□□□□ -0.14
VCP-201ENST00000358901 PAN2Q504Q3 1202 aaKnown RBP14.15□□□□□ -0.14
VCP-201ENST00000358901 SPDYCQ5MJ68 293 aa14.15□□□□□ -0.14
VCP-201ENST00000358901 ZCCHC23Q6ZST2 131 aa14.15□□□□□ -0.14
VCP-201ENST00000358901 FKBP9P1Q75LS8 142 aa14.15□□□□□ -0.14
VCP-201ENST00000358901 HES6Q96HZ4 224 aa14.15□□□□□ -0.14
VCP-201ENST00000358901 L3MBTL3Q96JM7 780 aaPredicted RBP14.15□□□□□ -0.14
VCP-201ENST00000358901 UNKQ9C0B0 810 aaKnown RBP14.15□□□□□ -0.14
VCP-201ENST00000358901 ABI2Q9NYB9 513 aaPredicted RBP14.15□□□□□ -0.14
VCP-201ENST00000358901 PCYOX1Q9UHG3 505 aa14.15□□□□□ -0.14
VCP-201ENST00000358901 MYO1GB0I1T2 1018 aa14.15□□□□□ -0.14
VCP-201ENST00000358901 KCNK1O00180 336 aa14.15□□□□□ -0.14
VCP-201ENST00000358901 FKBP6O75344 327 aa14.15□□□□□ -0.14
VCP-201ENST00000358901 PIAS1O75925 651 aa14.15□□□□□ -0.14
VCP-201ENST00000358901 ETS1P14921 441 aa14.15□□□□□ -0.14
VCP-201ENST00000358901 CNTFP26441 200 aa14.15□□□□□ -0.14
VCP-201ENST00000358901 ZNF484Q5JVG2 852 aa14.15□□□□□ -0.14
VCP-201ENST00000358901 WASHC2DQ5SRD0 308 aa14.15□□□□□ -0.14
VCP-201ENST00000358901 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.15□□□□□ -0.14
VCP-201ENST00000358901 PWWP2AQ96N64 755 aa14.15□□□□□ -0.14
VCP-201ENST00000358901 ZBED2Q9BTP6 218 aa14.15□□□□□ -0.14
VCP-201ENST00000358901 KATNAL1Q9BW62 490 aa14.15□□□□□ -0.14
VCP-201ENST00000358901 DNAJC5Q9H3Z4 198 aa14.15□□□□□ -0.14
VCP-201ENST00000358901 TBC1D23Q9NUY8 699 aa14.15□□□□□ -0.14
VCP-201ENST00000358901 MST1RQ04912 1400 aa14.15□□□□□ -0.14
VCP-201ENST00000358901 F9P00740 461 aa14.15□□□□□ -0.14
VCP-201ENST00000358901 ADRB2P07550 413 aa14.15□□□□□ -0.14
VCP-201ENST00000358901 DRG2P55039 364 aaKnown RBP14.15□□□□□ -0.14
VCP-201ENST00000358901 NME5P56597 212 aa14.15□□□□□ -0.14
VCP-201ENST00000358901 ECM1Q16610 540 aa14.15□□□□□ -0.14
VCP-201ENST00000358901 MIB1Q86YT6 1006 aa14.15□□□□□ -0.14
VCP-201ENST00000358901 BRSK2Q8IWQ3 736 aa14.15□□□□□ -0.14
VCP-201ENST00000358901 KATNAL2Q8IYT4 538 aa14.15□□□□□ -0.14
VCP-201ENST00000358901 KAT2BQ92831 832 aa14.15□□□□□ -0.14
VCP-201ENST00000358901 DTNBP1Q96EV8 351 aa14.15□□□□□ -0.14
VCP-201ENST00000358901 APOPT1Q96IL0 206 aa14.15□□□□□ -0.14
VCP-201ENST00000358901 KIAA1683Q9H0B3 1180 aa14.15□□□□□ -0.14
VCP-201ENST00000358901 IKZF4Q9H2S9 585 aa14.15□□□□□ -0.14
VCP-201ENST00000358901 MYOM1P52179 1685 aa14.15□□□□□ -0.14
VCP-201ENST00000358901 RPA3P35244 121 aaPredicted RBP14.15□□□□□ -0.14
VCP-201ENST00000358901 WLSQ5T9L3 541 aa14.15□□□□□ -0.14
VCP-201ENST00000358901 PDPK2PQ6A1A2 396 aa14.15□□□□□ -0.14
VCP-201ENST00000358901 NIPA1Q7RTP0 329 aa14.15□□□□□ -0.14
VCP-201ENST00000358901 UNC45BQ8IWX7 931 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms