RNA–Protein interactions for RNA: ENST00000358694.10

CTNND1-201, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-201ENST00000358694 LRRC49Q8IUZ0 686 aa9.16□□□□□ -0.94
CTNND1-201ENST00000358694 GUF1Q8N442 669 aaKnown RBP9.16□□□□□ -0.94
CTNND1-201ENST00000358694 FAM120BQ96EK7 910 aaKnown RBP9.16□□□□□ -0.94
CTNND1-201ENST00000358694 AP4S1Q9Y587 144 aa9.16□□□□□ -0.94
CTNND1-201ENST00000358694 B3GAT3O94766 335 aa9.15□□□□□ -0.94
CTNND1-201ENST00000358694 OR6B1O95007 311 aa9.15□□□□□ -0.94
CTNND1-201ENST00000358694 GTF2H1P32780 548 aa9.15□□□□□ -0.94
CTNND1-201ENST00000358694 CCNG1P51959 295 aa9.15□□□□□ -0.94
CTNND1-201ENST00000358694 COPAP53621 1224 aa9.15□□□□□ -0.94
CTNND1-201ENST00000358694 SCARF1Q14162 830 aa9.15□□□□□ -0.94
CTNND1-201ENST00000358694 ANGEL2Q5VTE6 544 aaKnown RBP9.15□□□□□ -0.94
CTNND1-201ENST00000358694 CYP20A1Q6UW02 462 aa9.15□□□□□ -0.94
CTNND1-201ENST00000358694 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.15□□□□□ -0.94
CTNND1-201ENST00000358694 ITIH5Q86UX2 942 aa9.15□□□□□ -0.94
CTNND1-201ENST00000358694 NT5DC3Q86UY8 548 aa9.15□□□□□ -0.94
CTNND1-201ENST00000358694 CBWD2Q8IUF1 395 aa9.15□□□□□ -0.94
CTNND1-201ENST00000358694 ADGRE3Q9BY15 652 aa9.15□□□□□ -0.94
CTNND1-201ENST00000358694 ACTR8Q9H981 624 aa9.15□□□□□ -0.94
CTNND1-201ENST00000358694 GPRC5DQ9NZD1 345 aa9.15□□□□□ -0.94
CTNND1-201ENST00000358694 PCDHGA3Q9Y5H0 932 aa9.15□□□□□ -0.94
CTNND1-201ENST00000358694 TMEM94Q12767 1356 aa9.15□□□□□ -0.94
CTNND1-201ENST00000358694 SLC12A8A0AV02 714 aa9.15□□□□□ -0.94
CTNND1-201ENST00000358694 DNALI1O14645 258 aaPredicted RBP9.15□□□□□ -0.94
CTNND1-201ENST00000358694 HBP1O60381 514 aa9.15□□□□□ -0.94
CTNND1-201ENST00000358694 KRT6AP02538 564 aa9.15□□□□□ -0.94
CTNND1-201ENST00000358694 KRT6BP04259 564 aa9.15□□□□□ -0.94
CTNND1-201ENST00000358694 IFNA16P05015 189 aa9.15□□□□□ -0.94
CTNND1-201ENST00000358694 ITGB3P05106 788 aa9.15□□□□□ -0.94
CTNND1-201ENST00000358694 LSP1P33241 339 aa9.15□□□□□ -0.94
CTNND1-201ENST00000358694 KRT6CP48668 564 aa9.15□□□□□ -0.94
CTNND1-201ENST00000358694 ALG11Q2TAA5 492 aa9.15□□□□□ -0.94
CTNND1-201ENST00000358694 NDUFAF6Q330K2 333 aa9.15□□□□□ -0.94
CTNND1-201ENST00000358694 ARMC3Q5W041 872 aa9.15□□□□□ -0.94
CTNND1-201ENST00000358694 NEK7Q8TDX7 302 aa9.15□□□□□ -0.94
CTNND1-201ENST00000358694 SLC4A9Q96Q91 983 aa9.15□□□□□ -0.94
CTNND1-201ENST00000358694 CGRRF1Q99675 332 aa9.15□□□□□ -0.94
CTNND1-201ENST00000358694 DCP1AQ9NPI6 582 aaPredicted RBP9.15□□□□□ -0.94
CTNND1-201ENST00000358694 ZNF624Q9P2J8 865 aaPredicted RBP9.15□□□□□ -0.94
CTNND1-201ENST00000358694 ZNRF3Q9ULT6 936 aa9.15□□□□□ -0.94
CTNND1-201ENST00000358694 USP15Q9Y4E8 981 aaPredicted RBP9.15□□□□□ -0.94
CTNND1-201ENST00000358694 IQCMA0A1B0GVH7 501 aa9.15□□□□□ -0.94
CTNND1-201ENST00000358694 WWP2O00308 870 aa9.15□□□□□ -0.94
CTNND1-201ENST00000358694 NR5A2O00482 541 aa9.15□□□□□ -0.94
CTNND1-201ENST00000358694 MGRN1O60291 552 aa9.15□□□□□ -0.94
CTNND1-201ENST00000358694 FAM20BO75063 409 aa9.15□□□□□ -0.94
CTNND1-201ENST00000358694 MPOP05164 745 aa9.15□□□□□ -0.94
CTNND1-201ENST00000358694 CYP2A7P20853 494 aa9.15□□□□□ -0.94
CTNND1-201ENST00000358694 KLRC2P26717 231 aa9.15□□□□□ -0.94
CTNND1-201ENST00000358694 S100GP29377 79 aa9.15□□□□□ -0.94
CTNND1-201ENST00000358694 FDFT1P37268 417 aa9.15□□□□□ -0.94
CTNND1-201ENST00000358694 CLK3P49761 638 aaKnown RBP9.15□□□□□ -0.94
CTNND1-201ENST00000358694 PURAQ00577 322 aaKnown RBP9.15□□□□□ -0.94
CTNND1-201ENST00000358694 ACOX1Q15067 660 aa9.15□□□□□ -0.94
CTNND1-201ENST00000358694 GLRA4Q5JXX5 417 aa9.15□□□□□ -0.94
CTNND1-201ENST00000358694 TRPM8Q7Z2W7 1104 aa9.15□□□□□ -0.94
CTNND1-201ENST00000358694 FAM228AQ86W67 206 aa9.15□□□□□ -0.94
CTNND1-201ENST00000358694 TBC1D10CQ8IV04 446 aa9.15□□□□□ -0.94
CTNND1-201ENST00000358694 SPPL2AQ8TCT8 520 aa9.15□□□□□ -0.94
CTNND1-201ENST00000358694 REXO5Q96IC2 774 aaKnown RBP9.15□□□□□ -0.94
CTNND1-201ENST00000358694 PPP1R10Q96QC0 940 aaKnown RBP9.15□□□□□ -0.94
CTNND1-201ENST00000358694 PIF1Q9H611 641 aa9.15□□□□□ -0.94
CTNND1-201ENST00000358694 PPCSQ9HAB8 311 aa9.15□□□□□ -0.94
CTNND1-201ENST00000358694 CYP4F12Q9HCS2 524 aa9.15□□□□□ -0.94
CTNND1-201ENST00000358694 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.15□□□□□ -0.94
CTNND1-201ENST00000358694 ING3Q9NXR8 418 aa9.15□□□□□ -0.94
CTNND1-201ENST00000358694 DPP3Q9NY33 737 aa9.15□□□□□ -0.94
CTNND1-201ENST00000358694 NARFQ9UHQ1 456 aa9.15□□□□□ -0.94
CTNND1-201ENST00000358694 TNFSF13BQ9Y275 285 aa9.15□□□□□ -0.94
CTNND1-201ENST00000358694 CCNT2O60583 730 aaKnown RBP9.15□□□□□ -0.95
CTNND1-201ENST00000358694 MAGEA4P43358 317 aa9.15□□□□□ -0.95
CTNND1-201ENST00000358694 STRIP1Q5VSL9 837 aa9.15□□□□□ -0.95
CTNND1-201ENST00000358694 DSG4Q86SJ6 1040 aa9.15□□□□□ -0.95
CTNND1-201ENST00000358694 IQCF2Q8IXL9 164 aa9.15□□□□□ -0.95
CTNND1-201ENST00000358694 DSELQ8IZU8 1212 aa9.15□□□□□ -0.95
CTNND1-201ENST00000358694 CLIP3Q96DZ5 547 aa9.15□□□□□ -0.95
CTNND1-201ENST00000358694 CCDC126Q96EE4 140 aa9.15□□□□□ -0.95
CTNND1-201ENST00000358694 SGSM3Q96HU1 749 aa9.15□□□□□ -0.95
CTNND1-201ENST00000358694 UBE2OQ9C0C9 1292 aaKnown RBP9.15□□□□□ -0.95
CTNND1-201ENST00000358694 GJB4Q9NTQ9 266 aa9.15□□□□□ -0.95
CTNND1-201ENST00000358694 UBQLN1Q9UMX0 589 aaKnown RBP9.15□□□□□ -0.95
CTNND1-201ENST00000358694 SNX13Q9Y5W8 968 aa9.15□□□□□ -0.95
CTNND1-201ENST00000358694 RAD54BQ9Y620 910 aa9.15□□□□□ -0.95
CTNND1-201ENST00000358694 MORC2Q9Y6X9 1032 aaPredicted RBP9.15□□□□□ -0.95
CTNND1-201ENST00000358694 VPS4BO75351 444 aa9.14□□□□□ -0.95
CTNND1-201ENST00000358694 SCGNO76038 276 aa9.14□□□□□ -0.95
CTNND1-201ENST00000358694 HLA-DRAP01903 254 aa9.14□□□□□ -0.95
CTNND1-201ENST00000358694 NR3C2P08235 984 aa9.14□□□□□ -0.95
CTNND1-201ENST00000358694 PSMD7P51665 324 aa9.14□□□□□ -0.95
CTNND1-201ENST00000358694 COPZ1P61923 177 aa9.14□□□□□ -0.95
CTNND1-201ENST00000358694 PTPN12Q05209 780 aaKnown RBP9.14□□□□□ -0.95
CTNND1-201ENST00000358694 ITGADQ13349 1161 aa9.14□□□□□ -0.95
CTNND1-201ENST00000358694 ITGA9Q13797 1035 aa9.14□□□□□ -0.95
CTNND1-201ENST00000358694 CHPFQ8IZ52 775 aa9.14□□□□□ -0.95
CTNND1-201ENST00000358694 ARRDC4Q8NCT1 418 aa9.14□□□□□ -0.95
CTNND1-201ENST00000358694 ZNF671Q8TAW3 534 aa9.14□□□□□ -0.95
CTNND1-201ENST00000358694 DNAJC9Q8WXX5 260 aa9.14□□□□□ -0.95
CTNND1-201ENST00000358694 TMEM159Q96B96 161 aa9.14□□□□□ -0.95
CTNND1-201ENST00000358694 CNPPD1Q9BV87 410 aa9.14□□□□□ -0.95
CTNND1-201ENST00000358694 HEG1Q9ULI3 1381 aa9.14□□□□□ -0.95
CTNND1-201ENST00000358694 A0A0G2JLW4 131 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms