RNA–Protein interactions for RNA: ENST00000358545.6

TNFSF11-202, Transcript of TNF superfamily member 11, humanhuman

TSL 1 (best) BASIC

Gene TNFSF11, Length 1,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11-202ENST00000358545 RAXQ9Y2V3 346 aa6.94□□□□□ -1.3
TNFSF11-202ENST00000358545 EMC9Q9Y3B6 208 aa6.94□□□□□ -1.3
TNFSF11-202ENST00000358545 CDY1Q9Y6F8 540 aa6.94□□□□□ -1.3
TNFSF11-202ENST00000358545 CNTNAP5Q8WYK1 1306 aa6.93□□□□□ -1.3
TNFSF11-202ENST00000358545 DENND4CQ5VZ89 1909 aa6.93□□□□□ -1.3
TNFSF11-202ENST00000358545 MYBPHLA2RUH7 354 aa6.93□□□□□ -1.3
TNFSF11-202ENST00000358545 CCER2I3L3R5 266 aa6.93□□□□□ -1.3
TNFSF11-202ENST00000358545 MAFO75444 373 aaPredicted RBP6.93□□□□□ -1.3
TNFSF11-202ENST00000358545 ERLIN2O94905 339 aa6.93□□□□□ -1.3
TNFSF11-202ENST00000358545 SLITRK5O94991 958 aa6.93□□□□□ -1.3
TNFSF11-202ENST00000358545 S100BP04271 92 aaPredicted RBP6.93□□□□□ -1.3
TNFSF11-202ENST00000358545 CYP21A2P08686 494 aa6.93□□□□□ -1.3
TNFSF11-202ENST00000358545 SRGAP2CP0DJJ0 459 aa6.93□□□□□ -1.3
TNFSF11-202ENST00000358545 GJA1P17302 382 aa6.93□□□□□ -1.3
TNFSF11-202ENST00000358545 AKAP5P24588 427 aa6.93□□□□□ -1.3
TNFSF11-202ENST00000358545 ETV3P41162 512 aa6.93□□□□□ -1.3
TNFSF11-202ENST00000358545 MLLT6P55198 1093 aaPredicted RBP6.93□□□□□ -1.3
TNFSF11-202ENST00000358545 IRX4P78413 519 aa6.93□□□□□ -1.3
TNFSF11-202ENST00000358545 PRR16Q569H4 304 aa6.93□□□□□ -1.3
TNFSF11-202ENST00000358545 NFXL1Q6ZNB6 911 aa6.93□□□□□ -1.3
TNFSF11-202ENST00000358545 PDZD4Q76G19 769 aaPredicted RBP6.93□□□□□ -1.3
TNFSF11-202ENST00000358545 SRGAP1Q7Z6B7 1085 aa6.93□□□□□ -1.3
TNFSF11-202ENST00000358545 FERMT3Q86UX7 667 aa6.93□□□□□ -1.3
TNFSF11-202ENST00000358545 MFSD6LQ8IWD5 586 aa6.93□□□□□ -1.3
TNFSF11-202ENST00000358545 TRIM59Q8IWR1 403 aa6.93□□□□□ -1.3
TNFSF11-202ENST00000358545 YAF2Q8IY57 180 aa6.93□□□□□ -1.3
TNFSF11-202ENST00000358545 UBR7Q8N806 425 aa6.93□□□□□ -1.3
TNFSF11-202ENST00000358545 NCOA7Q8NI08 942 aa6.93□□□□□ -1.3
TNFSF11-202ENST00000358545 ZSCAN18Q8TBC5 510 aaPredicted RBP6.93□□□□□ -1.3
TNFSF11-202ENST00000358545 MDM1Q8TC05 714 aa6.93□□□□□ -1.3
TNFSF11-202ENST00000358545 RSPRY1Q96DX4 576 aa6.93□□□□□ -1.3
TNFSF11-202ENST00000358545 ZFYVE19Q96K21 471 aa6.93□□□□□ -1.3
TNFSF11-202ENST00000358545 SEMA6CQ9H3T2 930 aa6.93□□□□□ -1.3
TNFSF11-202ENST00000358545 AKTIPQ9H8T0 292 aa6.93□□□□□ -1.3
TNFSF11-202ENST00000358545 INTS7Q9NVH2 962 aaKnown RBP6.93□□□□□ -1.3
TNFSF11-202ENST00000358545 GTSE1Q9NYZ3 720 aa6.93□□□□□ -1.3
TNFSF11-202ENST00000358545 GIT1Q9Y2X7 761 aa6.93□□□□□ -1.3
TNFSF11-202ENST00000358545 PLXND1Q9Y4D7 1925 aa6.93□□□□□ -1.3
TNFSF11-202ENST00000358545 SMCO2A6NFE2 343 aa6.92□□□□□ -1.3
TNFSF11-202ENST00000358545 E7EWF7 191 aa6.92□□□□□ -1.3
TNFSF11-202ENST00000358545 CHADO15335 359 aa6.92□□□□□ -1.3
TNFSF11-202ENST00000358545 TSPAN1O60635 241 aa6.92□□□□□ -1.3
TNFSF11-202ENST00000358545 MOSPD3O75425 235 aa6.92□□□□□ -1.3
TNFSF11-202ENST00000358545 STBD1O95210 358 aa6.92□□□□□ -1.3
TNFSF11-202ENST00000358545 NFICP08651 508 aa6.92□□□□□ -1.3
TNFSF11-202ENST00000358545 CYP3A4P08684 503 aa6.92□□□□□ -1.3
TNFSF11-202ENST00000358545 ZNF445P59923 1031 aa6.92□□□□□ -1.3
TNFSF11-202ENST00000358545 FAM193AP78312 1265 aa6.92□□□□□ -1.3
TNFSF11-202ENST00000358545 NFKB2Q00653 900 aa6.92□□□□□ -1.3
TNFSF11-202ENST00000358545 KARSQ15046 597 aaKnown RBP6.92□□□□□ -1.3
TNFSF11-202ENST00000358545 XKR3Q5GH77 459 aa6.92□□□□□ -1.3
TNFSF11-202ENST00000358545 PLA2G4FQ68DD2 849 aa6.92□□□□□ -1.3
TNFSF11-202ENST00000358545 CDPF1Q6NVV7 123 aa6.92□□□□□ -1.3
TNFSF11-202ENST00000358545 CNNM4Q6P4Q7 775 aa6.92□□□□□ -1.3
TNFSF11-202ENST00000358545 NOTUMQ6P988 496 aa6.92□□□□□ -1.3
TNFSF11-202ENST00000358545 PDXDC1Q6P996 788 aa6.92□□□□□ -1.3
TNFSF11-202ENST00000358545 TMTC3Q6ZXV5 915 aa6.92□□□□□ -1.3
TNFSF11-202ENST00000358545 LRRTM3Q86VH5 581 aa6.92□□□□□ -1.3
TNFSF11-202ENST00000358545 RALGPS2Q86X27 583 aaPredicted RBP6.92□□□□□ -1.3
TNFSF11-202ENST00000358545 DDX42Q86XP3 938 aaKnown RBP eCLIP6.92□□□□□ -1.3
TNFSF11-202ENST00000358545 MB21D2Q8IYB1 491 aaPredicted RBP6.92□□□□□ -1.3
TNFSF11-202ENST00000358545 RNF141Q8WVD5 230 aa6.92□□□□□ -1.3
TNFSF11-202ENST00000358545 CRYGNQ8WXF5 182 aa6.92□□□□□ -1.3
TNFSF11-202ENST00000358545 BRF1Q92994 677 aa6.92□□□□□ -1.3
TNFSF11-202ENST00000358545 GJA10Q969M2 543 aa6.92□□□□□ -1.3
TNFSF11-202ENST00000358545 TARS2Q9BW92 718 aaKnown RBP6.92□□□□□ -1.3
TNFSF11-202ENST00000358545 ASPNQ9BXN1 380 aa6.92□□□□□ -1.3
TNFSF11-202ENST00000358545 CEP41Q9BYV8 373 aa6.92□□□□□ -1.3
TNFSF11-202ENST00000358545 TRIM6Q9C030 488 aaPredicted RBP6.92□□□□□ -1.3
TNFSF11-202ENST00000358545 UNC45AQ9H3U1 944 aa6.92□□□□□ -1.3
TNFSF11-202ENST00000358545 SLITRK6Q9H5Y7 841 aa6.92□□□□□ -1.3
TNFSF11-202ENST00000358545 MAGEC2Q9UBF1 373 aaPredicted RBP6.92□□□□□ -1.3
TNFSF11-202ENST00000358545 MTRRQ9UBK8 725 aa6.92□□□□□ -1.3
TNFSF11-202ENST00000358545 MAPRE3Q9UPY8 281 aa6.92□□□□□ -1.3
TNFSF11-202ENST00000358545 INVSQ9Y283 1065 aa6.92□□□□□ -1.3
TNFSF11-202ENST00000358545 PCDH15Q96QU1 1955 aa6.92□□□□□ -1.3
TNFSF11-202ENST00000358545 MUC22E2RYF6 1773 aaPredicted RBP6.92□□□□□ -1.3
TNFSF11-202ENST00000358545 HELZP42694 1942 aaKnown RBP6.92□□□□□ -1.3
TNFSF11-202ENST00000358545 CCDC194A0A1B0GVG4 234 aa6.91□□□□□ -1.3
TNFSF11-202ENST00000358545 ARHGEF37A1IGU5 675 aa6.91□□□□□ -1.3
TNFSF11-202ENST00000358545 CCDC69A6NI79 296 aa6.91□□□□□ -1.3
TNFSF11-202ENST00000358545 H0Y626 953 aa6.91□□□□□ -1.3
TNFSF11-202ENST00000358545 PRRG1O14668 218 aa6.91□□□□□ -1.3
TNFSF11-202ENST00000358545 ZNF197O14709 1029 aa6.91□□□□□ -1.3
TNFSF11-202ENST00000358545 MEFVO15553 781 aaPredicted RBP6.91□□□□□ -1.3
TNFSF11-202ENST00000358545 GAS7O60861 476 aa6.91□□□□□ -1.3
TNFSF11-202ENST00000358545 KCNH1O95259 989 aa6.91□□□□□ -1.3
TNFSF11-202ENST00000358545 TRIM16O95361 564 aa6.91□□□□□ -1.3
TNFSF11-202ENST00000358545 PRKCBP05771 671 aa6.91□□□□□ -1.3
TNFSF11-202ENST00000358545 MYL4P12829 197 aa6.91□□□□□ -1.3
TNFSF11-202ENST00000358545 GLB1P16278 677 aa6.91□□□□□ -1.3
TNFSF11-202ENST00000358545 RDXP35241 583 aaKnown RBP6.91□□□□□ -1.3
TNFSF11-202ENST00000358545 CDKN1CP49918 316 aaPredicted RBP6.91□□□□□ -1.3
TNFSF11-202ENST00000358545 JAK3P52333 1124 aa6.91□□□□□ -1.3
TNFSF11-202ENST00000358545 SPIRE1Q08AE8 756 aa6.91□□□□□ -1.3
TNFSF11-202ENST00000358545 TUSC3Q13454 348 aa6.91□□□□□ -1.3
TNFSF11-202ENST00000358545 TEAD2Q15562 447 aa6.91□□□□□ -1.3
TNFSF11-202ENST00000358545 TRIM61Q5EBN2 209 aa6.91□□□□□ -1.3
TNFSF11-202ENST00000358545 PMS2CLQ68D20 193 aa6.91□□□□□ -1.3
TNFSF11-202ENST00000358545 RTL10Q7L3V2 364 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms