RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 RFX6Q8HWS3 928 aa11.86□□□□□ -0.51
CNOT3-202ENST00000358389 CROCCP3Q8IVE0 287 aa11.86□□□□□ -0.51
CNOT3-202ENST00000358389 ACTL9Q8TC94 416 aa11.86□□□□□ -0.51
CNOT3-202ENST00000358389 DQX1Q8TE96 717 aaKnown RBP11.86□□□□□ -0.51
CNOT3-202ENST00000358389 DCAKDQ8WVC6 231 aa11.86□□□□□ -0.51
CNOT3-202ENST00000358389 SHC3Q92529 594 aa11.86□□□□□ -0.51
CNOT3-202ENST00000358389 OXCT2Q9BYC2 517 aaPredicted RBP11.86□□□□□ -0.51
CNOT3-202ENST00000358389 TMEM206Q9H813 350 aa11.86□□□□□ -0.51
CNOT3-202ENST00000358389 SEL1LQ9UBV2 794 aa11.86□□□□□ -0.51
CNOT3-202ENST00000358389 STK24Q9Y6E0 443 aa11.86□□□□□ -0.51
CNOT3-202ENST00000358389 CAPN14A8MX76 684 aa11.86□□□□□ -0.51
CNOT3-202ENST00000358389 CST8O60676 142 aa11.86□□□□□ -0.51
CNOT3-202ENST00000358389 AVILO75366 819 aa11.86□□□□□ -0.51
CNOT3-202ENST00000358389 PORP16435 677 aaPredicted RBP11.86□□□□□ -0.51
CNOT3-202ENST00000358389 KCNA4P22459 653 aa11.86□□□□□ -0.51
CNOT3-202ENST00000358389 RFC1P35251 1148 aaPredicted RBP11.86□□□□□ -0.51
CNOT3-202ENST00000358389 RXRGP48443 463 aa11.86□□□□□ -0.51
CNOT3-202ENST00000358389 NRLP54845 237 aa11.86□□□□□ -0.51
CNOT3-202ENST00000358389 GPSM2P81274 684 aa11.86□□□□□ -0.51
CNOT3-202ENST00000358389 C6orf183Q5T699 404 aa11.86□□□□□ -0.51
CNOT3-202ENST00000358389 FAXCQ5TGI0 409 aa11.86□□□□□ -0.51
CNOT3-202ENST00000358389 NXNQ6DKJ4 435 aa11.86□□□□□ -0.51
CNOT3-202ENST00000358389 CHSY1Q86X52 802 aa11.86□□□□□ -0.51
CNOT3-202ENST00000358389 CCDC33Q8N5R6 958 aa11.86□□□□□ -0.51
CNOT3-202ENST00000358389 FAF2Q96CS3 445 aa11.86□□□□□ -0.51
CNOT3-202ENST00000358389 WRNIP1Q96S55 665 aa11.86□□□□□ -0.51
CNOT3-202ENST00000358389 BRD8Q9H0E9 1235 aa11.86□□□□□ -0.51
CNOT3-202ENST00000358389 TUT1Q9H6E5 874 aaKnown RBP11.86□□□□□ -0.51
CNOT3-202ENST00000358389 MAN1C1Q9NR34 630 aa11.86□□□□□ -0.51
CNOT3-202ENST00000358389 ZDHHC7Q9NXF8 308 aa11.86□□□□□ -0.51
CNOT3-202ENST00000358389 COQ6Q9Y2Z9 468 aa11.86□□□□□ -0.51
CNOT3-202ENST00000358389 CAMTA1Q9Y6Y1 1673 aa11.86□□□□□ -0.51
CNOT3-202ENST00000358389 TCRBV9S1A1TA0A576 114 aa11.85□□□□□ -0.51
CNOT3-202ENST00000358389 GH2P01242 217 aa11.85□□□□□ -0.51
CNOT3-202ENST00000358389 MX2P20592 715 aa11.85□□□□□ -0.51
CNOT3-202ENST00000358389 FGFR3P22607 806 aa11.85□□□□□ -0.51
CNOT3-202ENST00000358389 SERPINB5P36952 375 aa11.85□□□□□ -0.51
CNOT3-202ENST00000358389 GRM2Q14416 872 aa11.85□□□□□ -0.51
CNOT3-202ENST00000358389 SF3B3Q15393 1217 aaKnown RBP11.85□□□□□ -0.51
CNOT3-202ENST00000358389 BRDTQ58F21 947 aaPredicted RBP11.85□□□□□ -0.51
CNOT3-202ENST00000358389 VWA5B1Q5TIE3 1220 aa11.85□□□□□ -0.51
CNOT3-202ENST00000358389 PTAR1Q7Z6K3 402 aaPredicted RBP11.85□□□□□ -0.51
CNOT3-202ENST00000358389 ZNF410Q86VK4 478 aa11.85□□□□□ -0.51
CNOT3-202ENST00000358389 POLR3CQ9BUI4 534 aaPredicted RBP11.85□□□□□ -0.51
CNOT3-202ENST00000358389 CALN1Q9BXU9 219 aa11.85□□□□□ -0.51
CNOT3-202ENST00000358389 TRPV6Q9H1D0 765 aa11.85□□□□□ -0.51
CNOT3-202ENST00000358389 PCDH9Q9HC56 1237 aa11.85□□□□□ -0.51
CNOT3-202ENST00000358389 SSU72Q9NP77 194 aaKnown RBP11.85□□□□□ -0.51
CNOT3-202ENST00000358389 RGPD5Q99666 1765 aa11.85□□□□□ -0.51
CNOT3-202ENST00000358389 TCRBV7S3A2A0A539 114 aa11.85□□□□□ -0.51
CNOT3-202ENST00000358389 ARHGEF37A1IGU5 675 aa11.85□□□□□ -0.51
CNOT3-202ENST00000358389 NEMP1O14524 444 aa11.85□□□□□ -0.51
CNOT3-202ENST00000358389 MCF2LO15068 1137 aa11.85□□□□□ -0.51
CNOT3-202ENST00000358389 SPTLC1O15269 473 aa11.85□□□□□ -0.51
CNOT3-202ENST00000358389 P4HA2O15460 535 aa11.85□□□□□ -0.51
CNOT3-202ENST00000358389 NOL3O60936 208 aaKnown RBP11.85□□□□□ -0.51
CNOT3-202ENST00000358389 RPS6KA4O75676 772 aa11.85□□□□□ -0.51
CNOT3-202ENST00000358389 RBP3P10745 1247 aa11.85□□□□□ -0.51
CNOT3-202ENST00000358389 EIF2AK2P19525 551 aaKnown RBP11.85□□□□□ -0.51
CNOT3-202ENST00000358389 PAX3P23760 479 aa11.85□□□□□ -0.51
CNOT3-202ENST00000358389 NUP107P57740 925 aa11.85□□□□□ -0.51
CNOT3-202ENST00000358389 PSMC5P62195 406 aa11.85□□□□□ -0.51
CNOT3-202ENST00000358389 MRPS9P82933 396 aaKnown RBP11.85□□□□□ -0.51
CNOT3-202ENST00000358389 KLF1Q13351 362 aaPredicted RBP11.85□□□□□ -0.51
CNOT3-202ENST00000358389 TNFAIP1Q13829 316 aa11.85□□□□□ -0.51
CNOT3-202ENST00000358389 SNRNP35Q16560 246 aaKnown RBP11.85□□□□□ -0.51
CNOT3-202ENST00000358389 ANKDD1AQ495B1 522 aa11.85□□□□□ -0.51
CNOT3-202ENST00000358389 TTC39BQ5VTQ0 682 aaPredicted RBP11.85□□□□□ -0.51
CNOT3-202ENST00000358389 PDPK2PQ6A1A2 396 aa11.85□□□□□ -0.51
CNOT3-202ENST00000358389 PPP1R2P3Q6NXS1 205 aa11.85□□□□□ -0.51
CNOT3-202ENST00000358389 POTEHQ6S545 545 aa11.85□□□□□ -0.51
CNOT3-202ENST00000358389 SPOCD1Q6ZMY3 1216 aa11.85□□□□□ -0.51
CNOT3-202ENST00000358389 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.85□□□□□ -0.51
CNOT3-202ENST00000358389 ZMAT2Q96NC0 199 aaKnown RBP11.85□□□□□ -0.51
CNOT3-202ENST00000358389 SERPINI1Q99574 410 aa11.85□□□□□ -0.51
CNOT3-202ENST00000358389 CD209Q9NNX6 404 aa11.85□□□□□ -0.51
CNOT3-202ENST00000358389 ARHGAP26Q9UNA1 814 aa11.85□□□□□ -0.51
CNOT3-202ENST00000358389 WDR64B1ANS9 1081 aa11.85□□□□□ -0.51
CNOT3-202ENST00000358389 H7C0C1 242 aa11.85□□□□□ -0.51
CNOT3-202ENST00000358389 FBP2O00757 339 aa11.85□□□□□ -0.51
CNOT3-202ENST00000358389 ATP5OP48047 213 aa11.85□□□□□ -0.51
CNOT3-202ENST00000358389 C21orf59P57076 290 aa11.85□□□□□ -0.51
CNOT3-202ENST00000358389 DNAJC24Q6P3W2 148 aa11.85□□□□□ -0.51
CNOT3-202ENST00000358389 DARS2Q6PI48 645 aaKnown RBP11.85□□□□□ -0.51
CNOT3-202ENST00000358389 EEPD1Q7L9B9 569 aa11.85□□□□□ -0.51
CNOT3-202ENST00000358389 KATNAL2Q8IYT4 538 aa11.85□□□□□ -0.51
CNOT3-202ENST00000358389 LRRC43Q8N309 656 aa11.85□□□□□ -0.51
CNOT3-202ENST00000358389 ZSCAN18Q8TBC5 510 aaPredicted RBP11.85□□□□□ -0.51
CNOT3-202ENST00000358389 GJD4Q96KN9 370 aaPredicted RBP11.85□□□□□ -0.51
CNOT3-202ENST00000358389 MCEEQ96PE7 176 aa11.85□□□□□ -0.51
CNOT3-202ENST00000358389 PCSK1NQ9UHG2 260 aa11.85□□□□□ -0.51
CNOT3-202ENST00000358389 CICQ96RK0 1608 aaPredicted RBP11.85□□□□□ -0.51
CNOT3-202ENST00000358389 PIK3R2O00459 728 aa11.84□□□□□ -0.51
CNOT3-202ENST00000358389 TOP3BO95985 862 aaKnown RBP11.84□□□□□ -0.51
CNOT3-202ENST00000358389 CDH2P19022 906 aaPredicted RBP11.84□□□□□ -0.51
CNOT3-202ENST00000358389 CLK2P49760 499 aaKnown RBP11.84□□□□□ -0.51
CNOT3-202ENST00000358389 RPL7AP62424 266 aaKnown RBP11.84□□□□□ -0.51
CNOT3-202ENST00000358389 ZNF394Q53GI3 561 aa11.84□□□□□ -0.51
CNOT3-202ENST00000358389 SREK1Q8WXA9 508 aaKnown RBP11.84□□□□□ -0.51
CNOT3-202ENST00000358389 COX4I2Q96KJ9 171 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms