RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 CYP4F12Q9HCS2 524 aa10.07□□□□□ -0.8
CHD3-202ENST00000358181 CHMP1AQ9HD42 196 aaPredicted RBP10.07□□□□□ -0.8
CHD3-202ENST00000358181 ERVV-1B6SEH8 477 aa10.07□□□□□ -0.8
CHD3-202ENST00000358181 GTPBP1O00178 669 aaKnown RBP10.07□□□□□ -0.8
CHD3-202ENST00000358181 SEPT4O43236 478 aa10.07□□□□□ -0.8
CHD3-202ENST00000358181 CCNT2O60583 730 aaKnown RBP10.07□□□□□ -0.8
CHD3-202ENST00000358181 ODC1P11926 461 aa10.07□□□□□ -0.8
CHD3-202ENST00000358181 STAT5BP51692 787 aa10.07□□□□□ -0.8
CHD3-202ENST00000358181 MAGOHP61326 146 aaKnown RBP10.07□□□□□ -0.8
CHD3-202ENST00000358181 ZNF611Q8N823 705 aa10.07□□□□□ -0.8
CHD3-202ENST00000358181 ZNF483Q8TF39 744 aaPredicted RBP10.07□□□□□ -0.8
CHD3-202ENST00000358181 CASP10Q92851 521 aa10.07□□□□□ -0.8
CHD3-202ENST00000358181 RIC8BQ9NVN3 520 aa10.07□□□□□ -0.8
CHD3-202ENST00000358181 KIAA1257Q9ULG3 409 aa10.07□□□□□ -0.8
CHD3-202ENST00000358181 FAM50BQ9Y247 325 aa10.07□□□□□ -0.8
CHD3-202ENST00000358181 TTC34A8MYJ7 566 aa10.07□□□□□ -0.8
CHD3-202ENST00000358181 ECDO95905 644 aaPredicted RBP10.07□□□□□ -0.8
CHD3-202ENST00000358181 NR3C1P04150 777 aa10.07□□□□□ -0.8
CHD3-202ENST00000358181 NDUFV1P49821 464 aa10.07□□□□□ -0.8
CHD3-202ENST00000358181 LRP8Q14114 963 aa10.07□□□□□ -0.8
CHD3-202ENST00000358181 TXNRD1Q16881 649 aa10.07□□□□□ -0.8
CHD3-202ENST00000358181 EIF2S3LQ2VIR3 472 aaKnown RBP10.07□□□□□ -0.8
CHD3-202ENST00000358181 HERC6Q8IVU3 1022 aa10.07□□□□□ -0.8
CHD3-202ENST00000358181 DAW1Q8N136 415 aa10.07□□□□□ -0.8
CHD3-202ENST00000358181 DCAF4Q8WV16 495 aa10.07□□□□□ -0.8
CHD3-202ENST00000358181 PRMT1Q99873 361 aaKnown RBP10.07□□□□□ -0.8
CHD3-202ENST00000358181 SYNGAP1Q96PV0 1343 aa10.06□□□□□ -0.8
CHD3-202ENST00000358181 SNX4O95219 450 aa10.06□□□□□ -0.8
CHD3-202ENST00000358181 MYBL1P10243 752 aa10.06□□□□□ -0.8
CHD3-202ENST00000358181 SNF8Q96H20 258 aa10.06□□□□□ -0.8
CHD3-202ENST00000358181 SENP7Q9BQF6 1050 aa10.06□□□□□ -0.8
CHD3-202ENST00000358181 RMND5AQ9H871 391 aa10.06□□□□□ -0.8
CHD3-202ENST00000358181 STAP2Q9UGK3 403 aa10.06□□□□□ -0.8
CHD3-202ENST00000358181 GSAPA4D1B5 854 aa10.06□□□□□ -0.8
CHD3-202ENST00000358181 TDP2O95551 362 aa10.06□□□□□ -0.8
CHD3-202ENST00000358181 AKR1B1P15121 316 aa10.06□□□□□ -0.8
CHD3-202ENST00000358181 EIF3BP55884 814 aaKnown RBP10.06□□□□□ -0.8
CHD3-202ENST00000358181 BOP1Q14137 746 aaKnown RBP10.06□□□□□ -0.8
CHD3-202ENST00000358181 NFIXQ14938 502 aa10.06□□□□□ -0.8
CHD3-202ENST00000358181 PPM1LQ5SGD2 360 aa10.06□□□□□ -0.8
CHD3-202ENST00000358181 EFCAB12Q6NXP0 572 aa10.06□□□□□ -0.8
CHD3-202ENST00000358181 MTHFD1LQ6UB35 978 aa10.06□□□□□ -0.8
CHD3-202ENST00000358181 MYO1HQ8N1T3 1032 aa10.06□□□□□ -0.8
CHD3-202ENST00000358181 PMEPA1Q969W9 287 aa10.06□□□□□ -0.8
CHD3-202ENST00000358181 STARD7Q9NQZ5 370 aa10.06□□□□□ -0.8
CHD3-202ENST00000358181 PXMP2Q9NR77 195 aa10.06□□□□□ -0.8
CHD3-202ENST00000358181 SPATA31A3Q5VYP0 1347 aa10.06□□□□□ -0.8
CHD3-202ENST00000358181 CCDC163A0A0D9SF12 145 aa10.06□□□□□ -0.8
CHD3-202ENST00000358181 PSMD11O00231 422 aa10.06□□□□□ -0.8
CHD3-202ENST00000358181 RHOAP61586 193 aa10.06□□□□□ -0.8
CHD3-202ENST00000358181 SLC45A4Q5BKX6 768 aa10.06□□□□□ -0.8
CHD3-202ENST00000358181 ARMCX4Q5H9R4 360 aa10.06□□□□□ -0.8
CHD3-202ENST00000358181 CDH24Q86UP0 819 aa10.06□□□□□ -0.8
CHD3-202ENST00000358181 RBBP8Q99708 897 aa10.06□□□□□ -0.8
CHD3-202ENST00000358181 DPY30Q9C005 99 aa10.06□□□□□ -0.8
CHD3-202ENST00000358181 HPS5Q9UPZ3 1129 aa10.06□□□□□ -0.8
CHD3-202ENST00000358181 CHMP2BQ9UQN3 213 aa10.06□□□□□ -0.8
CHD3-202ENST00000358181 CYP2C9P11712 490 aa10.06□□□□□ -0.8
CHD3-202ENST00000358181 TRAF2Q12933 501 aa10.06□□□□□ -0.8
CHD3-202ENST00000358181 TTLL9Q3SXZ7 439 aa10.06□□□□□ -0.8
CHD3-202ENST00000358181 CTXN3Q4LDR2 81 aa10.06□□□□□ -0.8
CHD3-202ENST00000358181 TPGS1Q6ZTW0 290 aa10.06□□□□□ -0.8
CHD3-202ENST00000358181 KCTD8Q6ZWB6 473 aa10.06□□□□□ -0.8
CHD3-202ENST00000358181 ARMCX6Q7L4S7 300 aa10.06□□□□□ -0.8
CHD3-202ENST00000358181 RASAL3Q86YV0 1011 aa10.06□□□□□ -0.8
CHD3-202ENST00000358181 OR5T3Q8NGG3 340 aa10.06□□□□□ -0.8
CHD3-202ENST00000358181 EMILIN2Q9BXX0 1053 aa10.06□□□□□ -0.8
CHD3-202ENST00000358181 TRIM2Q9C040 744 aa10.06□□□□□ -0.8
CHD3-202ENST00000358181 FOXN1O15353 648 aa10.06□□□□□ -0.8
CHD3-202ENST00000358181 TFPIP10646 304 aa10.06□□□□□ -0.8
CHD3-202ENST00000358181 PPM1AP35813 382 aa10.06□□□□□ -0.8
CHD3-202ENST00000358181 CBX5P45973 191 aa10.06□□□□□ -0.8
CHD3-202ENST00000358181 GALK1P51570 392 aa10.06□□□□□ -0.8
CHD3-202ENST00000358181 TOB2Q14106 344 aaPredicted RBP10.06□□□□□ -0.8
CHD3-202ENST00000358181 UTS2BQ765I0 119 aa10.06□□□□□ -0.8
CHD3-202ENST00000358181 TEX13BQ9BXU2 312 aa10.06□□□□□ -0.8
CHD3-202ENST00000358181 RAB6BQ9NRW1 208 aa10.06□□□□□ -0.8
CHD3-202ENST00000358181 SMPD4Q9NXE4 827 aa10.06□□□□□ -0.8
CHD3-202ENST00000358181 COPG2Q9UBF2 871 aa10.06□□□□□ -0.8
CHD3-202ENST00000358181 KIF24Q5T7B8 1368 aa10.06□□□□□ -0.8
CHD3-202ENST00000358181 BMP10O95393 424 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 POLBP06746 335 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 NAA30Q147X3 362 aaPredicted RBP10.05□□□□□ -0.8
CHD3-202ENST00000358181 C12orf60Q5U649 245 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 CES5AQ6NT32 575 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 ALKBH5Q6P6C2 394 aaKnown RBP10.05□□□□□ -0.8
CHD3-202ENST00000358181 TRIM72Q6ZMU5 477 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 MSANTD1Q6ZTZ1 278 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 OR2W6PQ8NHA6 318 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 CPB2Q96IY4 423 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 FANCEQ9HB96 536 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 JPH1Q9HDC5 661 aaPredicted RBP10.05□□□□□ -0.8
CHD3-202ENST00000358181 SPG21Q9NZD8 308 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 NOP53Q9NZM5 478 aaKnown RBP10.05□□□□□ -0.8
CHD3-202ENST00000358181 SH3BGRL2Q9UJC5 107 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 CDC42BPGQ6DT37 1551 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 TBC1D3BA6NDS4 549 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 CYP26A1O43174 497 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 ZNF208O43345 1280 aa10.05□□□□□ -0.8
CHD3-202ENST00000358181 SOAT2O75908 522 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms