RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 TTLL13PA6NNM8 815 aa11.08□□□□□ -0.64
CAPN3-205ENST00000357568 SGK1O00141 431 aa11.08□□□□□ -0.64
CAPN3-205ENST00000357568 COPEO14579 308 aa11.08□□□□□ -0.64
CAPN3-205ENST00000357568 OPHN1O60890 802 aa11.08□□□□□ -0.64
CAPN3-205ENST00000357568 INHBAP08476 426 aa11.08□□□□□ -0.64
CAPN3-205ENST00000357568 HARSP12081 509 aaKnown RBP11.08□□□□□ -0.64
CAPN3-205ENST00000357568 ACAT1P24752 427 aaKnown RBP11.08□□□□□ -0.64
CAPN3-205ENST00000357568 GJA5P36382 358 aa11.08□□□□□ -0.64
CAPN3-205ENST00000357568 BACE1P56817 501 aa11.08□□□□□ -0.64
CAPN3-205ENST00000357568 SHROOM1Q2M3G4 852 aaPredicted RBP11.08□□□□□ -0.64
CAPN3-205ENST00000357568 WDR44Q5JSH3 913 aa11.08□□□□□ -0.64
CAPN3-205ENST00000357568 CFAP157Q5JU67 520 aa11.08□□□□□ -0.64
CAPN3-205ENST00000357568 RAPH1Q70E73 1250 aa11.08□□□□□ -0.64
CAPN3-205ENST00000357568 FASTKD5Q7L8L6 764 aaKnown RBP11.08□□□□□ -0.64
CAPN3-205ENST00000357568 MIER3Q7Z3K6 550 aa11.08□□□□□ -0.64
CAPN3-205ENST00000357568 ALYREFQ86V81 257 aaKnown RBP11.08□□□□□ -0.64
CAPN3-205ENST00000357568 SLC26A11Q86WA9 606 aa11.08□□□□□ -0.64
CAPN3-205ENST00000357568 RHPN2Q8IUC4 686 aa11.08□□□□□ -0.64
CAPN3-205ENST00000357568 CRLF3Q8IUI8 442 aa11.08□□□□□ -0.64
CAPN3-205ENST00000357568 ANKMY2Q8IV38 441 aa11.08□□□□□ -0.64
CAPN3-205ENST00000357568 LPAR1Q92633 364 aa11.08□□□□□ -0.64
CAPN3-205ENST00000357568 E2F7Q96AV8 911 aa11.08□□□□□ -0.64
CAPN3-205ENST00000357568 FAM118BQ9BPY3 351 aa11.08□□□□□ -0.64
CAPN3-205ENST00000357568 MXRA8Q9BRK3 442 aa11.08□□□□□ -0.64
CAPN3-205ENST00000357568 IQCGQ9H095 443 aaKnown RBP11.08□□□□□ -0.64
CAPN3-205ENST00000357568 THEGQ9P2T0 379 aa11.08□□□□□ -0.64
CAPN3-205ENST00000357568 PLLPQ9Y342 182 aa11.08□□□□□ -0.64
CAPN3-205ENST00000357568 MRPL11Q9Y3B7 192 aaKnown RBP11.08□□□□□ -0.64
CAPN3-205ENST00000357568 TCRBV5S1A1TA0A578 114 aa11.07□□□□□ -0.64
CAPN3-205ENST00000357568 SDR42E2A6NKP2 422 aa11.07□□□□□ -0.64
CAPN3-205ENST00000357568 ACO1P21399 889 aaKnown RBP11.07□□□□□ -0.64
CAPN3-205ENST00000357568 PRDX6P30041 224 aa11.07□□□□□ -0.64
CAPN3-205ENST00000357568 DSG3P32926 999 aa11.07□□□□□ -0.64
CAPN3-205ENST00000357568 HPCAP84074 193 aa11.07□□□□□ -0.64
CAPN3-205ENST00000357568 MSLNQ13421 630 aaPredicted RBP11.07□□□□□ -0.64
CAPN3-205ENST00000357568 PDK3Q15120 406 aa11.07□□□□□ -0.64
CAPN3-205ENST00000357568 HSF5Q4G112 596 aaPredicted RBP11.07□□□□□ -0.64
CAPN3-205ENST00000357568 FNBP1LQ5T0N5 605 aa11.07□□□□□ -0.64
CAPN3-205ENST00000357568 BBS12Q6ZW61 710 aa11.07□□□□□ -0.64
CAPN3-205ENST00000357568 PRPF39Q86UA1 669 aaKnown RBP11.07□□□□□ -0.64
CAPN3-205ENST00000357568 ACTRT2Q8TDY3 377 aa11.07□□□□□ -0.64
CAPN3-205ENST00000357568 TTC17Q96AE7 1141 aa11.07□□□□□ -0.64
CAPN3-205ENST00000357568 OTUD5Q96G74 571 aa11.07□□□□□ -0.64
CAPN3-205ENST00000357568 SERAC1Q96JX3 654 aa11.07□□□□□ -0.64
CAPN3-205ENST00000357568 TTC1Q99614 292 aa11.07□□□□□ -0.64
CAPN3-205ENST00000357568 C11orf70Q9BRQ4 267 aa11.07□□□□□ -0.64
CAPN3-205ENST00000357568 NTPCRQ9BSD7 190 aaKnown RBP11.07□□□□□ -0.64
CAPN3-205ENST00000357568 MRPS26Q9BYN8 205 aaKnown RBP11.07□□□□□ -0.64
CAPN3-205ENST00000357568 ZCWPW1Q9H0M4 648 aa11.07□□□□□ -0.64
CAPN3-205ENST00000357568 PREBQ9HCU5 417 aa11.07□□□□□ -0.64
CAPN3-205ENST00000357568 ANKEF1Q9NU02 776 aa11.07□□□□□ -0.64
CAPN3-205ENST00000357568 PRR12Q9ULL5 1215 aa11.07□□□□□ -0.64
CAPN3-205ENST00000357568 TRDMT1O14717 391 aaKnown RBP11.07□□□□□ -0.64
CAPN3-205ENST00000357568 PLA2G6O60733 806 aa11.07□□□□□ -0.64
CAPN3-205ENST00000357568 KRT37O76014 449 aa11.07□□□□□ -0.64
CAPN3-205ENST00000357568 BAG2O95816 211 aa11.07□□□□□ -0.64
CAPN3-205ENST00000357568 SMIM18P0DKX4 95 aa11.07□□□□□ -0.64
CAPN3-205ENST00000357568 ETS1P14921 441 aa11.07□□□□□ -0.64
CAPN3-205ENST00000357568 MMP8P22894 467 aa11.07□□□□□ -0.64
CAPN3-205ENST00000357568 TBXAS1P24557 533 aaPredicted RBP11.07□□□□□ -0.64
CAPN3-205ENST00000357568 GRIA2P42262 883 aa11.07□□□□□ -0.64
CAPN3-205ENST00000357568 QARSP47897 775 aaKnown RBP11.07□□□□□ -0.64
CAPN3-205ENST00000357568 ACBD5Q5T8D3 534 aaPredicted RBP11.07□□□□□ -0.64
CAPN3-205ENST00000357568 ARMCX6Q7L4S7 300 aa11.07□□□□□ -0.64
CAPN3-205ENST00000357568 C4orf19Q8IY42 314 aa11.07□□□□□ -0.64
CAPN3-205ENST00000357568 THNSL1Q8IYQ7 743 aa11.07□□□□□ -0.64
CAPN3-205ENST00000357568 GPD1LQ8N335 351 aa11.07□□□□□ -0.64
CAPN3-205ENST00000357568 CCDC33Q8N5R6 958 aa11.07□□□□□ -0.64
CAPN3-205ENST00000357568 TMEM161BQ8NDZ6 487 aa11.07□□□□□ -0.64
CAPN3-205ENST00000357568 CATSPER1Q8NEC5 780 aa11.07□□□□□ -0.64
CAPN3-205ENST00000357568 ZSWIM2Q8NEG5 633 aa11.07□□□□□ -0.64
CAPN3-205ENST00000357568 DDI1Q8WTU0 396 aa11.07□□□□□ -0.64
CAPN3-205ENST00000357568 SRPK1Q96SB4 655 aaKnown RBP11.07□□□□□ -0.64
CAPN3-205ENST00000357568 ZNF518BQ9C0D4 1074 aa11.07□□□□□ -0.64
CAPN3-205ENST00000357568 OCEL1Q9H607 264 aa11.07□□□□□ -0.64
CAPN3-205ENST00000357568 C6orf203Q9P0P8 240 aaPredicted RBP11.07□□□□□ -0.64
CAPN3-205ENST00000357568 ARMCX1Q9P291 453 aa11.07□□□□□ -0.64
CAPN3-205ENST00000357568 SLC45A1Q9Y2W3 748 aa11.07□□□□□ -0.64
CAPN3-205ENST00000357568 HBS1LQ9Y450 684 aaKnown RBP11.07□□□□□ -0.64
CAPN3-205ENST00000357568 SNRPAP09012 282 aaKnown RBP11.06□□□□□ -0.64
CAPN3-205ENST00000357568 KRT10P13645 584 aa11.06□□□□□ -0.64
CAPN3-205ENST00000357568 ATF7P17544 494 aaPredicted RBP11.06□□□□□ -0.64
CAPN3-205ENST00000357568 BST1Q10588 318 aa11.06□□□□□ -0.64
CAPN3-205ENST00000357568 SPP2Q13103 211 aa11.06□□□□□ -0.64
CAPN3-205ENST00000357568 NOGQ13253 232 aa11.06□□□□□ -0.64
CAPN3-205ENST00000357568 MSS51Q4VC12 460 aa11.06□□□□□ -0.64
CAPN3-205ENST00000357568 OGFRL1Q5TC84 451 aaPredicted RBP11.06□□□□□ -0.64
CAPN3-205ENST00000357568 AHI1Q8N157 1196 aa11.06□□□□□ -0.64
CAPN3-205ENST00000357568 ZNF696Q9H7X3 374 aa11.06□□□□□ -0.64
CAPN3-205ENST00000357568 HSFX1Q9UBD0 423 aa11.06□□□□□ -0.64
CAPN3-205ENST00000357568 RAB26Q9ULW5 256 aa11.06□□□□□ -0.64
CAPN3-205ENST00000357568 ZNF232Q9UNY5 417 aa11.06□□□□□ -0.64
CAPN3-205ENST00000357568 DMTF1Q9Y222 760 aa11.06□□□□□ -0.64
CAPN3-205ENST00000357568 ZNF510Q9Y2H8 683 aa11.06□□□□□ -0.64
CAPN3-205ENST00000357568 ARHGAP10A1A4S6 786 aa11.06□□□□□ -0.64
CAPN3-205ENST00000357568 ZNF862O60290 1169 aa11.06□□□□□ -0.64
CAPN3-205ENST00000357568 ARP10275 920 aa11.06□□□□□ -0.64
CAPN3-205ENST00000357568 SERPINB8P50452 374 aa11.06□□□□□ -0.64
CAPN3-205ENST00000357568 USP46P62068 366 aa11.06□□□□□ -0.64
CAPN3-205ENST00000357568 FAAP100Q0VG06 881 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms