RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 SAR1AQ9NR31 198 aa15.31■□□□□ 0.04
CHD4-201ENST00000357008 RAD54BQ9Y620 910 aa15.31■□□□□ 0.04
CHD4-201ENST00000357008 NR5A2O00482 541 aa15.3■□□□□ 0.04
CHD4-201ENST00000357008 KCNQ2O43526 872 aa15.3■□□□□ 0.04
CHD4-201ENST00000357008 ATP6V1B2P21281 511 aa15.3■□□□□ 0.04
CHD4-201ENST00000357008 NAMPTP43490 491 aa15.3■□□□□ 0.04
CHD4-201ENST00000357008 RPL21P46778 160 aaKnown RBP15.3■□□□□ 0.04
CHD4-201ENST00000357008 IRGCQ6NXR0 463 aa15.3■□□□□ 0.04
CHD4-201ENST00000357008 TTC30AQ86WT1 665 aa15.3■□□□□ 0.04
CHD4-201ENST00000357008 EIF1ADQ8N9N8 165 aaKnown RBP15.3■□□□□ 0.04
CHD4-201ENST00000357008 MTMR12Q9C0I1 747 aa15.3■□□□□ 0.04
CHD4-201ENST00000357008 NMRK1Q9NWW6 199 aa15.3■□□□□ 0.04
CHD4-201ENST00000357008 IQSEC2Q5JU85 1478 aa15.3■□□□□ 0.04
CHD4-201ENST00000357008 DNALI1O14645 258 aaPredicted RBP15.3■□□□□ 0.04
CHD4-201ENST00000357008 UBDO15205 165 aa15.3■□□□□ 0.04
CHD4-201ENST00000357008 NPTX2P47972 431 aa15.3■□□□□ 0.04
CHD4-201ENST00000357008 TIGD7Q6NT04 549 aaPredicted RBP15.3■□□□□ 0.04
CHD4-201ENST00000357008 SLFN11Q7Z7L1 901 aa15.3■□□□□ 0.04
CHD4-201ENST00000357008 CD302Q8IX05 232 aa15.3■□□□□ 0.04
CHD4-201ENST00000357008 BLOC1S5Q8TDH9 187 aa15.3■□□□□ 0.04
CHD4-201ENST00000357008 GDPD5Q8WTR4 605 aa15.3■□□□□ 0.04
CHD4-201ENST00000357008 CINPQ9BW66 212 aaPredicted RBP15.3■□□□□ 0.04
CHD4-201ENST00000357008 MAP3K13O43283 966 aa15.3■□□□□ 0.04
CHD4-201ENST00000357008 TNFAIP8O95379 198 aa15.3■□□□□ 0.04
CHD4-201ENST00000357008 NPTXRO95502 500 aa15.3■□□□□ 0.04
CHD4-201ENST00000357008 SERPINE1P05121 402 aa15.3■□□□□ 0.04
CHD4-201ENST00000357008 FASP25445 335 aa15.3■□□□□ 0.04
CHD4-201ENST00000357008 HARS2P49590 506 aaKnown RBP15.3■□□□□ 0.04
CHD4-201ENST00000357008 GALNTL6Q49A17 601 aa15.3■□□□□ 0.04
CHD4-201ENST00000357008 LRRC74BQ6ZQY2 392 aa15.3■□□□□ 0.04
CHD4-201ENST00000357008 ATP6V0D2Q8N8Y2 350 aa15.3■□□□□ 0.04
CHD4-201ENST00000357008 TCP10LQ8TDR4 215 aa15.3■□□□□ 0.04
CHD4-201ENST00000357008 TAS1R2Q8TE23 839 aa15.3■□□□□ 0.04
CHD4-201ENST00000357008 VPS33AQ96AX1 596 aa15.3■□□□□ 0.04
CHD4-201ENST00000357008 GPRC5CQ9NQ84 441 aa15.3■□□□□ 0.04
CHD4-201ENST00000357008 MAP2K7O14733 419 aa15.3■□□□□ 0.04
CHD4-201ENST00000357008 RPS6KA5O75582 802 aa15.3■□□□□ 0.04
CHD4-201ENST00000357008 C1QBPQ07021 282 aaKnown RBP15.3■□□□□ 0.04
CHD4-201ENST00000357008 BMPR2Q13873 1038 aa15.3■□□□□ 0.04
CHD4-201ENST00000357008 AGKQ53H12 422 aa15.3■□□□□ 0.04
CHD4-201ENST00000357008 TBCELQ5QJ74 424 aa15.3■□□□□ 0.04
CHD4-201ENST00000357008 HS6ST3Q8IZP7 471 aa15.3■□□□□ 0.04
CHD4-201ENST00000357008 FUKQ8N0W3 1084 aa15.3■□□□□ 0.04
CHD4-201ENST00000357008 CYP4F12Q9HCS2 524 aa15.3■□□□□ 0.04
CHD4-201ENST00000357008 SLC25A27O95847 323 aa15.3■□□□□ 0.04
CHD4-201ENST00000357008 MLNP12872 115 aa15.3■□□□□ 0.04
CHD4-201ENST00000357008 PRR5LQ6MZQ0 368 aa15.3■□□□□ 0.04
CHD4-201ENST00000357008 KCND1Q9NSA2 647 aa15.3■□□□□ 0.04
CHD4-201ENST00000357008 THAP1Q9NVV9 213 aa15.3■□□□□ 0.04
CHD4-201ENST00000357008 TARBP1Q13395 1621 aaKnown RBP15.3■□□□□ 0.04
CHD4-201ENST00000357008 RRM2P31350 389 aa15.29■□□□□ 0.04
CHD4-201ENST00000357008 PLIN5Q00G26 463 aa15.29■□□□□ 0.04
CHD4-201ENST00000357008 TMEM62Q0P6H9 643 aa15.29■□□□□ 0.04
CHD4-201ENST00000357008 SEC23AQ15436 765 aa15.29■□□□□ 0.04
CHD4-201ENST00000357008 ARHGAP17Q68EM7 881 aa15.29■□□□□ 0.04
CHD4-201ENST00000357008 DDX53Q86TM3 631 aaKnown RBP15.29■□□□□ 0.04
CHD4-201ENST00000357008 SLC5A5Q92911 643 aa15.29■□□□□ 0.04
CHD4-201ENST00000357008 APOPT1Q96IL0 206 aa15.29■□□□□ 0.04
CHD4-201ENST00000357008 SEPT5Q99719 369 aaPredicted RBP15.29■□□□□ 0.04
CHD4-201ENST00000357008 ABCA6Q8N139 1617 aa15.29■□□□□ 0.04
CHD4-201ENST00000357008 MPOP05164 745 aa15.29■□□□□ 0.04
CHD4-201ENST00000357008 CYP2C9P11712 490 aa15.29■□□□□ 0.04
CHD4-201ENST00000357008 IFI35P80217 286 aaPredicted RBP15.29■□□□□ 0.04
CHD4-201ENST00000357008 USP13Q92995 863 aaPredicted RBP15.29■□□□□ 0.04
CHD4-201ENST00000357008 OPTNQ96CV9 577 aa15.29■□□□□ 0.04
CHD4-201ENST00000357008 RMND5BQ96G75 393 aaPredicted RBP15.29■□□□□ 0.04
CHD4-201ENST00000357008 GPRC5DQ9NZD1 345 aa15.29■□□□□ 0.04
CHD4-201ENST00000357008 COPG2Q9UBF2 871 aa15.29■□□□□ 0.04
CHD4-201ENST00000357008 TRIM24O15164 1050 aa15.29■□□□□ 0.04
CHD4-201ENST00000357008 CNOT3O75175 753 aaKnown RBP15.29■□□□□ 0.04
CHD4-201ENST00000357008 SLC1A6P48664 564 aa15.29■□□□□ 0.04
CHD4-201ENST00000357008 PRKAA1Q13131 559 aa15.29■□□□□ 0.04
CHD4-201ENST00000357008 Q4G0T1 1027 aa15.29■□□□□ 0.04
CHD4-201ENST00000357008 SLC22A9Q8IVM8 553 aa15.29■□□□□ 0.04
CHD4-201ENST00000357008 MRPS26Q9BYN8 205 aaKnown RBP15.29■□□□□ 0.04
CHD4-201ENST00000357008 BCL10O95999 233 aa15.29■□□□□ 0.04
CHD4-201ENST00000357008 ICAM1P05362 532 aa15.29■□□□□ 0.04
CHD4-201ENST00000357008 NME5P56597 212 aa15.29■□□□□ 0.04
CHD4-201ENST00000357008 CYP24A1Q07973 514 aa15.29■□□□□ 0.04
CHD4-201ENST00000357008 GJC2Q5T442 439 aaPredicted RBP15.29■□□□□ 0.04
CHD4-201ENST00000357008 ZFP1Q6P2D0 407 aa15.29■□□□□ 0.04
CHD4-201ENST00000357008 HDDC2Q7Z4H3 204 aa15.29■□□□□ 0.04
CHD4-201ENST00000357008 FBXL16Q8N461 479 aa15.29■□□□□ 0.04
CHD4-201ENST00000357008 CASP10Q92851 521 aa15.29■□□□□ 0.04
CHD4-201ENST00000357008 MPP4Q96JB8 637 aa15.29■□□□□ 0.04
CHD4-201ENST00000357008 SYTL2Q9HCH5 934 aa15.29■□□□□ 0.04
CHD4-201ENST00000357008 RRN3P2A6NIE6 340 aa15.29■□□□□ 0.04
CHD4-201ENST00000357008 MZF1P28698 734 aaPredicted RBP15.29■□□□□ 0.04
CHD4-201ENST00000357008 CCDC153Q494R4 210 aa15.29■□□□□ 0.04
CHD4-201ENST00000357008 CREG2Q8IUH2 290 aa15.29■□□□□ 0.04
CHD4-201ENST00000357008 LRRC4BQ9NT99 713 aa15.29■□□□□ 0.04
CHD4-201ENST00000357008 GPATCH2LQ9NWQ4 482 aa15.29■□□□□ 0.04
CHD4-201ENST00000357008 TMCC3Q9ULS5 477 aa15.29■□□□□ 0.04
CHD4-201ENST00000357008 AP4E1Q9UPM8 1137 aa15.29■□□□□ 0.04
CHD4-201ENST00000357008 SMNDC1O75940 238 aaKnown RBP eCLIP15.28■□□□□ 0.048e-12■■■■□ 26.7
CHD4-201ENST00000357008 TCF3P15923 654 aa15.28■□□□□ 0.04
CHD4-201ENST00000357008 NCALDP61601 193 aa15.28■□□□□ 0.04
CHD4-201ENST00000357008 SEZ6Q53EL9 994 aa15.28■□□□□ 0.04
CHD4-201ENST00000357008 KIAA0895Q8NCT3 520 aa15.28■□□□□ 0.04
CHD4-201ENST00000357008 SLITRK1Q96PX8 696 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms