RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 BPIFB4P59827 614 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 PLD1Q13393 1074 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 MAMLD1Q13495 774 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 TRIM14Q14142 442 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 TXNRD3NBQ6F5E7 133 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 ANKRD54Q6NXT1 300 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 VSTM1Q6UX27 236 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 ERICH1Q86X53 443 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.23□□□□□ -1.73
LIG4-201ENST00000356922 SHKBP1Q8TBC3 707 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 CFAP57Q96MR6 1250 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 PRKD2Q9BZL6 878 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 LMAN2LQ9H0V9 348 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 ADAM7Q9H2U9 754 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 ABCB6Q9NP58 842 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 ADAM22Q9P0K1 906 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 MYO1AQ9UBC5 1043 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 SFMBT1Q9UHJ3 866 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 PAXBP1Q9Y5B6 917 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 SSU72P8A0A1W2PR75 194 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 ANTXRLA6NF34 631 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 AKR1B10O60218 316 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 ZBED1O96006 694 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 ZDHHC11BP0C7U3 371 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 ELF1P32519 619 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 ARHGAP25P42331 645 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 ALDH1A3P47895 512 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 KCNQ1P51787 676 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 YWHAEP62258 255 aaKnown RBP4.23□□□□□ -1.73
LIG4-201ENST00000356922 MAPRE1Q15691 268 aaKnown RBP4.23□□□□□ -1.73
LIG4-201ENST00000356922 TAF12Q16514 161 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 C15orf59Q2T9L4 293 aaPredicted RBP4.23□□□□□ -1.73
LIG4-201ENST00000356922 PRSS36Q5K4E3 855 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 BSPRYQ5W0U4 402 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 CYP26C1Q6V0L0 522 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 PHF13Q86YI8 300 aaPredicted RBP4.23□□□□□ -1.73
LIG4-201ENST00000356922 TMEM35BQ8NCS4 154 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 TTC16Q8NEE8 873 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 ADAMTS19Q8TE59 1207 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 KCTD13Q8WZ19 329 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 C18orf8Q96DM3 657 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 MYEOVQ96EZ4 313 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 MCRS1Q96EZ8 462 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 SPATA17Q96L03 361 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 MYRFLQ96LU7 910 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 PLEKHA4Q9H4M7 779 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 POMKQ9H5K3 350 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 FAM124BQ9H5Z6 455 aaPredicted RBP4.23□□□□□ -1.73
LIG4-201ENST00000356922 HESX1Q9UBX0 185 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 XPO7Q9UIA9 1087 aaKnown RBP4.23□□□□□ -1.73
LIG4-201ENST00000356922 PCDHA13Q9Y5I0 950 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 TMEM265A0A087WTH1 108 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 MSI1O43347 362 aaKnown RBP4.23□□□□□ -1.73
LIG4-201ENST00000356922 RTN2O75298 545 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 PAPLNO95428 1278 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 MYL4P12829 197 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 CEBPBP17676 345 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 GABRR2P28476 465 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 GGCXP38435 758 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 TUFMP49411 452 aaKnown RBP4.23□□□□□ -1.73
LIG4-201ENST00000356922 MRPS5P82675 430 aaKnown RBP4.23□□□□□ -1.73
LIG4-201ENST00000356922 EIF4EBP2Q13542 120 aaPredicted RBP4.23□□□□□ -1.73
LIG4-201ENST00000356922 PPM1LQ5SGD2 360 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 IER5LQ5T953 404 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 OR6B2Q6IFH4 312 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 PDE12Q6L8Q7 609 aaKnown RBP4.23□□□□□ -1.73
LIG4-201ENST00000356922 ZNF677Q86XU0 584 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 REXO1L1PQ8IX06 675 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 TTC39CQ8N584 583 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 MAB21L3Q8N8X9 362 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 SMRP1Q8NCR6 262 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 CASP10Q92851 521 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 PABPC5Q96DU9 382 aaKnown RBP4.23□□□□□ -1.73
LIG4-201ENST00000356922 ZFRQ96KR1 1074 aaKnown RBP4.23□□□□□ -1.73
LIG4-201ENST00000356922 FAM81BQ96LP2 452 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 TTLL2Q9BWV7 592 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 TRMT1Q9NXH9 659 aaKnown RBP4.23□□□□□ -1.73
LIG4-201ENST00000356922 LMCD1Q9NZU5 365 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 MYOFQ9NZM1 2061 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 PATJQ8NI35 1801 aa4.23□□□□□ -1.73
LIG4-201ENST00000356922 MED7O43513 233 aa4.22□□□□□ -1.73
LIG4-201ENST00000356922 BUB1O43683 1085 aa4.22□□□□□ -1.73
LIG4-201ENST00000356922 GREM1O60565 184 aa4.22□□□□□ -1.73
LIG4-201ENST00000356922 PRAMEF12O95522 483 aa4.22□□□□□ -1.73
LIG4-201ENST00000356922 KLKB1P03952 638 aa4.22□□□□□ -1.73
LIG4-201ENST00000356922 GZMAP12544 262 aa4.22□□□□□ -1.73
LIG4-201ENST00000356922 YWHAQP27348 245 aa4.22□□□□□ -1.73
LIG4-201ENST00000356922 VIPR2P41587 438 aa4.22□□□□□ -1.73
LIG4-201ENST00000356922 NUMBP49757 651 aa4.22□□□□□ -1.73
LIG4-201ENST00000356922 TEAD2Q15562 447 aa4.22□□□□□ -1.73
LIG4-201ENST00000356922 CCDC14Q49A88 953 aa4.22□□□□□ -1.73
LIG4-201ENST00000356922 ATP13A4Q4VNC1 1196 aa4.22□□□□□ -1.73
LIG4-201ENST00000356922 PLEKHA7Q6IQ23 1121 aa4.22□□□□□ -1.73
LIG4-201ENST00000356922 GPR153Q6NV75 609 aa4.22□□□□□ -1.73
LIG4-201ENST00000356922 ANKS1BQ7Z6G8 1248 aa4.22□□□□□ -1.73
LIG4-201ENST00000356922 GPR149Q86SP6 731 aa4.22□□□□□ -1.73
LIG4-201ENST00000356922 TMTC1Q8IUR5 882 aa4.22□□□□□ -1.73
LIG4-201ENST00000356922 DEFB106AQ8N104 65 aa4.22□□□□□ -1.73
LIG4-201ENST00000356922 ARL14EPQ8N8R7 260 aaPredicted RBP4.22□□□□□ -1.73
LIG4-201ENST00000356922 SLC35G2Q8TBE7 412 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms