RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 APPL1Q9UKG1 709 aa18.61■□□□□ 0.57
COL18A1-202ENST00000355480 CNTNAP2Q9UHC6 1331 aa18.61■□□□□ 0.57
COL18A1-202ENST00000355480 GRK3P35626 688 aa18.61■□□□□ 0.57
COL18A1-202ENST00000355480 GLRBP48167 497 aa18.61■□□□□ 0.57
COL18A1-202ENST00000355480 BST2Q10589 180 aaKnown RBP18.61■□□□□ 0.57
COL18A1-202ENST00000355480 STX5Q13190 355 aa18.61■□□□□ 0.57
COL18A1-202ENST00000355480 PLCL1Q15111 1095 aa18.61■□□□□ 0.57
COL18A1-202ENST00000355480 ITIH5Q86UX2 942 aa18.61■□□□□ 0.57
COL18A1-202ENST00000355480 TAS1R2Q8TE23 839 aa18.61■□□□□ 0.57
COL18A1-202ENST00000355480 CCDC126Q96EE4 140 aa18.61■□□□□ 0.57
COL18A1-202ENST00000355480 SNTG2Q9NY99 539 aa18.61■□□□□ 0.57
COL18A1-202ENST00000355480 PLAGL2Q9UPG8 496 aa18.61■□□□□ 0.57
COL18A1-202ENST00000355480 PRR23D1E9PI22 279 aaPredicted RBP18.61■□□□□ 0.57
COL18A1-202ENST00000355480 JCHAINP01591 159 aa18.61■□□□□ 0.57
COL18A1-202ENST00000355480 PRR23D2P0DMB1 279 aaPredicted RBP18.61■□□□□ 0.57
COL18A1-202ENST00000355480 COPAP53621 1224 aa18.61■□□□□ 0.57
COL18A1-202ENST00000355480 ELAVL2Q12926 359 aaKnown RBP18.61■□□□□ 0.57
COL18A1-202ENST00000355480 KBTBD12Q3ZCT8 623 aa18.61■□□□□ 0.57
COL18A1-202ENST00000355480 CAPRIN2Q6IMN6 1127 aaKnown RBP18.61■□□□□ 0.57
COL18A1-202ENST00000355480 DNERQ8NFT8 737 aa18.61■□□□□ 0.57
COL18A1-202ENST00000355480 CNPY3Q9BT09 278 aa18.61■□□□□ 0.57
COL18A1-202ENST00000355480 DDX43Q9NXZ2 648 aaKnown RBP18.61■□□□□ 0.57
COL18A1-202ENST00000355480 LNPEPQ9UIQ6 1025 aa18.61■□□□□ 0.57
COL18A1-202ENST00000355480 CDC42BPAQ5VT25 1732 aa18.61■□□□□ 0.57
COL18A1-202ENST00000355480 MMP14P50281 582 aa18.61■□□□□ 0.57
COL18A1-202ENST00000355480 ADGRE3Q9BY15 652 aa18.61■□□□□ 0.57
COL18A1-202ENST00000355480 DPP7Q9UHL4 492 aa18.61■□□□□ 0.57
COL18A1-202ENST00000355480 RASSF9O75901 435 aa18.61■□□□□ 0.57
COL18A1-202ENST00000355480 PTPN11Q06124 597 aaPredicted RBP18.61■□□□□ 0.57
COL18A1-202ENST00000355480 OVGP1Q12889 678 aa18.61■□□□□ 0.57
COL18A1-202ENST00000355480 WLSQ5T9L3 541 aa18.61■□□□□ 0.57
COL18A1-202ENST00000355480 CYP3A43Q9HB55 503 aa18.61■□□□□ 0.57
COL18A1-202ENST00000355480 TLR8Q9NR97 1041 aaKnown RBP18.61■□□□□ 0.57
COL18A1-202ENST00000355480 DYRK3O43781 588 aa18.6■□□□□ 0.57
COL18A1-202ENST00000355480 MAPK1P28482 360 aa18.6■□□□□ 0.57
COL18A1-202ENST00000355480 GRIK4Q16099 956 aa18.6■□□□□ 0.57
COL18A1-202ENST00000355480 CCDC142Q17RM4 750 aa18.6■□□□□ 0.57
COL18A1-202ENST00000355480 IYDQ6PHW0 289 aa18.6■□□□□ 0.57
COL18A1-202ENST00000355480 ZNF720Q7Z2F6 126 aa18.6■□□□□ 0.57
COL18A1-202ENST00000355480 RMND5AQ9H871 391 aa18.6■□□□□ 0.57
COL18A1-202ENST00000355480 TIMM13Q9Y5L4 95 aaPredicted RBP18.6■□□□□ 0.57
COL18A1-202ENST00000355480 SOX10P56693 466 aa18.6■□□□□ 0.57
COL18A1-202ENST00000355480 NFKBIZQ9BYH8 718 aa18.6■□□□□ 0.57
COL18A1-202ENST00000355480 SLC24A3Q9HC58 644 aa18.6■□□□□ 0.57
COL18A1-202ENST00000355480 CYP4F12Q9HCS2 524 aa18.6■□□□□ 0.57
COL18A1-202ENST00000355480 DRG1Q9Y295 367 aaKnown RBP18.6■□□□□ 0.57
COL18A1-202ENST00000355480 HSD17B3P37058 310 aa18.6■□□□□ 0.57
COL18A1-202ENST00000355480 KPNA1P52294 538 aaPredicted RBP18.6■□□□□ 0.57
COL18A1-202ENST00000355480 HERVK_113P62684 666 aa18.6■□□□□ 0.57
COL18A1-202ENST00000355480 EMC1Q8N766 993 aa18.6■□□□□ 0.57
COL18A1-202ENST00000355480 DNAJB3Q8WWF6 145 aa18.6■□□□□ 0.57
COL18A1-202ENST00000355480 PQBP1O60828 265 aaKnown RBP18.6■□□□□ 0.57
COL18A1-202ENST00000355480 INSRRP14616 1297 aa18.6■□□□□ 0.57
COL18A1-202ENST00000355480 RRM1P23921 792 aa18.6■□□□□ 0.57
COL18A1-202ENST00000355480 CLK1P49759 484 aaKnown RBP18.6■□□□□ 0.57
COL18A1-202ENST00000355480 TEX9Q8N6V9 391 aa18.6■□□□□ 0.57
COL18A1-202ENST00000355480 RXFP2Q8WXD0 754 aa18.6■□□□□ 0.57
COL18A1-202ENST00000355480 FAR2Q96K12 515 aa18.6■□□□□ 0.57
COL18A1-202ENST00000355480 CYP51A1Q16850 503 aa18.59■□□□□ 0.57
COL18A1-202ENST00000355480 ANKS6Q68DC2 871 aa18.59■□□□□ 0.57
COL18A1-202ENST00000355480 MAGEB10Q96LZ2 347 aaPredicted RBP18.59■□□□□ 0.57
COL18A1-202ENST00000355480 MTG1Q9BT17 334 aaPredicted RBP18.59■□□□□ 0.57
COL18A1-202ENST00000355480 IMPAD1Q9NX62 359 aa18.59■□□□□ 0.57
COL18A1-202ENST00000355480 ZSCAN32Q9NX65 697 aa18.59■□□□□ 0.57
COL18A1-202ENST00000355480 KANSL3Q9P2N6 904 aa18.59■□□□□ 0.57
COL18A1-202ENST00000355480 CD44P16070 742 aaKnown RBP18.59■□□□□ 0.57
COL18A1-202ENST00000355480 SCNN1BP51168 640 aa18.59■□□□□ 0.57
COL18A1-202ENST00000355480 MDM1Q8TC05 714 aa18.59■□□□□ 0.57
COL18A1-202ENST00000355480 ATP8B4Q8TF62 1192 aa18.59■□□□□ 0.57
COL18A1-202ENST00000355480 TMEM245Q9H330 911 aa18.59■□□□□ 0.57
COL18A1-202ENST00000355480 TPST1O60507 370 aa18.59■□□□□ 0.57
COL18A1-202ENST00000355480 PLA2G6O60733 806 aa18.59■□□□□ 0.57
COL18A1-202ENST00000355480 PCDH8O95206 1070 aa18.59■□□□□ 0.57
COL18A1-202ENST00000355480 ERVK-10P10266 1014 aa18.59■□□□□ 0.57
COL18A1-202ENST00000355480 VEGFAP15692 232 aaPredicted RBP18.59■□□□□ 0.57
COL18A1-202ENST00000355480 MRPS15P82914 257 aaKnown RBP18.59■□□□□ 0.57
COL18A1-202ENST00000355480 OVOS1Q6IE37 1185 aa18.59■□□□□ 0.57
COL18A1-202ENST00000355480 MPP6Q9NZW5 540 aa18.59■□□□□ 0.57
COL18A1-202ENST00000355480 ITGA11Q9UKX5 1188 aa18.59■□□□□ 0.57
COL18A1-202ENST00000355480 MADDQ8WXG6 1647 aa18.59■□□□□ 0.57
COL18A1-202ENST00000355480 TBL3Q12788 808 aaKnown RBP18.59■□□□□ 0.57
COL18A1-202ENST00000355480 PGM5Q15124 567 aa18.59■□□□□ 0.57
COL18A1-202ENST00000355480 SPOCD1Q6ZMY3 1216 aa18.59■□□□□ 0.57
COL18A1-202ENST00000355480 SLC47A2Q86VL8 602 aa18.59■□□□□ 0.57
COL18A1-202ENST00000355480 DDNO94850 711 aaPredicted RBP18.59■□□□□ 0.57
COL18A1-202ENST00000355480 LSM8O95777 96 aaKnown RBP18.59■□□□□ 0.57
COL18A1-202ENST00000355480 GLP2RO95838 553 aa18.59■□□□□ 0.57
COL18A1-202ENST00000355480 ALBP02768 609 aa18.59■□□□□ 0.57
COL18A1-202ENST00000355480 PCNAP12004 261 aa18.59■□□□□ 0.57
COL18A1-202ENST00000355480 PGS1Q32NB8 556 aa18.59■□□□□ 0.57
COL18A1-202ENST00000355480 CASKIN2Q8WXE0 1202 aa18.59■□□□□ 0.57
COL18A1-202ENST00000355480 SYT15Q9BQS2 421 aa18.59■□□□□ 0.57
COL18A1-202ENST00000355480 SERPINB5P36952 375 aa18.58■□□□□ 0.57
COL18A1-202ENST00000355480 AMPD2Q01433 879 aa18.58■□□□□ 0.57
COL18A1-202ENST00000355480 PTPAQ15257 358 aa18.58■□□□□ 0.57
COL18A1-202ENST00000355480 STRA8Q7Z7C7 330 aa18.58■□□□□ 0.57
COL18A1-202ENST00000355480 LZTS1Q9Y250 596 aa18.58■□□□□ 0.57
COL18A1-202ENST00000355480 SETBP1Q9Y6X0 1596 aa18.58■□□□□ 0.57
COL18A1-202ENST00000355480 PSMA3P25788 255 aa18.58■□□□□ 0.57
COL18A1-202ENST00000355480 ZNF438Q7Z4V0 828 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms