RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 CNTN1Q12860 1018 aa13.64□□□□□ -0.23
SCN8A-202ENST00000355133 CCDC81Q6ZN84 652 aa13.64□□□□□ -0.23
SCN8A-202ENST00000355133 TMC7Q7Z402 723 aa13.64□□□□□ -0.23
SCN8A-202ENST00000355133 ZNF614Q8N883 585 aa13.64□□□□□ -0.23
SCN8A-202ENST00000355133 EDEM1Q92611 657 aa13.64□□□□□ -0.23
SCN8A-202ENST00000355133 PDCD2LQ9BRP1 358 aa13.64□□□□□ -0.23
SCN8A-202ENST00000355133 FRMD8P1Q9BZ68 369 aaPredicted RBP13.64□□□□□ -0.23
SCN8A-202ENST00000355133 UBE2OQ9C0C9 1292 aaKnown RBP13.64□□□□□ -0.23
SCN8A-202ENST00000355133 SPATC1LQ9H0A9 340 aa13.64□□□□□ -0.23
SCN8A-202ENST00000355133 MRGBPQ9NV56 204 aa13.64□□□□□ -0.23
SCN8A-202ENST00000355133 DDX43Q9NXZ2 648 aaKnown RBP13.64□□□□□ -0.23
SCN8A-202ENST00000355133 TBKBP1A7MCY6 615 aa13.64□□□□□ -0.23
SCN8A-202ENST00000355133 H3BRB1 525 aa13.64□□□□□ -0.23
SCN8A-202ENST00000355133 FBXO21O94952 628 aa13.64□□□□□ -0.23
SCN8A-202ENST00000355133 TBL3Q12788 808 aaKnown RBP13.64□□□□□ -0.23
SCN8A-202ENST00000355133 PGM5Q15124 567 aa13.64□□□□□ -0.23
SCN8A-202ENST00000355133 CCDC142Q17RM4 750 aa13.64□□□□□ -0.23
SCN8A-202ENST00000355133 METTL7BQ6UX53 244 aa13.64□□□□□ -0.23
SCN8A-202ENST00000355133 LRRC34Q8IZ02 419 aa13.64□□□□□ -0.23
SCN8A-202ENST00000355133 PHACTR4Q8IZ21 702 aa13.64□□□□□ -0.23
SCN8A-202ENST00000355133 STN1Q9H668 368 aaKnown RBP13.64□□□□□ -0.23
SCN8A-202ENST00000355133 TUT1Q9H6E5 874 aaKnown RBP13.64□□□□□ -0.23
SCN8A-202ENST00000355133 OSGEPQ9NPF4 335 aa13.64□□□□□ -0.23
SCN8A-202ENST00000355133 PHTF1Q9UMS5 762 aa13.64□□□□□ -0.23
SCN8A-202ENST00000355133 DEAF1O75398 565 aaPredicted RBP13.64□□□□□ -0.23
SCN8A-202ENST00000355133 UBTFL6P0CB48 400 aaPredicted RBP13.64□□□□□ -0.23
SCN8A-202ENST00000355133 STRA8Q7Z7C7 330 aa13.64□□□□□ -0.23
SCN8A-202ENST00000355133 UBXN6Q9BZV1 441 aa13.64□□□□□ -0.23
SCN8A-202ENST00000355133 LRRC40Q9H9A6 602 aa13.64□□□□□ -0.23
SCN8A-202ENST00000355133 PCNAP12004 261 aa13.64□□□□□ -0.23
SCN8A-202ENST00000355133 INSRRP14616 1297 aa13.64□□□□□ -0.23
SCN8A-202ENST00000355133 DARSP14868 501 aaKnown RBP13.64□□□□□ -0.23
SCN8A-202ENST00000355133 ITGALP20701 1170 aa13.64□□□□□ -0.23
SCN8A-202ENST00000355133 PSMC6P62333 389 aa13.64□□□□□ -0.23
SCN8A-202ENST00000355133 PTPN11Q06124 597 aaPredicted RBP13.64□□□□□ -0.23
SCN8A-202ENST00000355133 GRIK4Q16099 956 aa13.64□□□□□ -0.23
SCN8A-202ENST00000355133 HERC6Q8IVU3 1022 aa13.64□□□□□ -0.23
SCN8A-202ENST00000355133 C4orf19Q8IY42 314 aa13.64□□□□□ -0.23
SCN8A-202ENST00000355133 MAGEB10Q96LZ2 347 aaPredicted RBP13.64□□□□□ -0.23
SCN8A-202ENST00000355133 UNKQ9C0B0 810 aaKnown RBP13.64□□□□□ -0.23
SCN8A-202ENST00000355133 PDGFCQ9NRA1 345 aa13.64□□□□□ -0.23
SCN8A-202ENST00000355133 SETBP1Q9Y6X0 1596 aa13.63□□□□□ -0.23
SCN8A-202ENST00000355133 AKAP3O75969 853 aa13.63□□□□□ -0.23
SCN8A-202ENST00000355133 DDNO94850 711 aaPredicted RBP13.63□□□□□ -0.23
SCN8A-202ENST00000355133 ALDH2P05091 517 aa13.63□□□□□ -0.23
SCN8A-202ENST00000355133 CKBP12277 381 aa13.63□□□□□ -0.23
SCN8A-202ENST00000355133 ACAT1P24752 427 aaKnown RBP13.63□□□□□ -0.23
SCN8A-202ENST00000355133 BST2Q10589 180 aaKnown RBP13.63□□□□□ -0.23
SCN8A-202ENST00000355133 PTGISQ16647 500 aa13.63□□□□□ -0.23
SCN8A-202ENST00000355133 TMC2Q8TDI7 906 aa13.63□□□□□ -0.23
SCN8A-202ENST00000355133 OSGEPL1Q9H4B0 414 aa13.63□□□□□ -0.23
SCN8A-202ENST00000355133 CAPN6Q9Y6Q1 641 aa13.63□□□□□ -0.23
SCN8A-202ENST00000355133 CLTCQ00610 1675 aaKnown RBP13.63□□□□□ -0.23
SCN8A-202ENST00000355133 SCNN1BP51168 640 aa13.63□□□□□ -0.23
SCN8A-202ENST00000355133 FBXO47Q5MNV8 452 aa13.63□□□□□ -0.23
SCN8A-202ENST00000355133 CCDC60Q8IWA6 550 aaPredicted RBP13.63□□□□□ -0.23
SCN8A-202ENST00000355133 CELF6Q96J87 481 aaKnown RBP13.63□□□□□ -0.23
SCN8A-202ENST00000355133 EMILIN2Q9BXX0 1053 aa13.63□□□□□ -0.23
SCN8A-202ENST00000355133 ZNF518BQ9C0D4 1074 aa13.63□□□□□ -0.23
SCN8A-202ENST00000355133 EHD4Q9H223 541 aa13.63□□□□□ -0.23
SCN8A-202ENST00000355133 NMRK1Q9NWW6 199 aa13.63□□□□□ -0.23
SCN8A-202ENST00000355133 CPSF4O95639 269 aaKnown RBP13.63□□□□□ -0.23
SCN8A-202ENST00000355133 RUNX1T1Q06455 604 aa13.63□□□□□ -0.23
SCN8A-202ENST00000355133 PHKG1Q16816 387 aa13.63□□□□□ -0.23
SCN8A-202ENST00000355133 TMEM154Q6P9G4 183 aa13.63□□□□□ -0.23
SCN8A-202ENST00000355133 PTAR1Q7Z6K3 402 aaPredicted RBP13.63□□□□□ -0.23
SCN8A-202ENST00000355133 TATDN2Q93075 761 aa13.63□□□□□ -0.23
SCN8A-202ENST00000355133 CNPY3Q9BT09 278 aa13.63□□□□□ -0.23
SCN8A-202ENST00000355133 F8VZ95 297 aa13.63□□□□□ -0.23
SCN8A-202ENST00000355133 PLA2G6O60733 806 aa13.63□□□□□ -0.23
SCN8A-202ENST00000355133 CYP51A1Q16850 503 aa13.63□□□□□ -0.23
SCN8A-202ENST00000355133 TTI2Q6NXR4 508 aa13.63□□□□□ -0.23
SCN8A-202ENST00000355133 SPIRE2Q8WWL2 714 aa13.63□□□□□ -0.23
SCN8A-202ENST00000355133 CEP41Q9BYV8 373 aa13.63□□□□□ -0.23
SCN8A-202ENST00000355133 MRPL42Q9Y6G3 142 aaKnown RBP13.63□□□□□ -0.23
SCN8A-202ENST00000355133 TIMM44O43615 452 aa13.63□□□□□ -0.23
SCN8A-202ENST00000355133 SYNCRIPO60506 623 aaKnown RBP13.63□□□□□ -0.23
SCN8A-202ENST00000355133 TSPAN3O60637 253 aa13.63□□□□□ -0.23
SCN8A-202ENST00000355133 PQBP1O60828 265 aaKnown RBP13.63□□□□□ -0.23
SCN8A-202ENST00000355133 CRTAMO95727 393 aa13.63□□□□□ -0.23
SCN8A-202ENST00000355133 MRPS15P82914 257 aaKnown RBP13.63□□□□□ -0.23
SCN8A-202ENST00000355133 DAB2IPQ5VWQ8 1189 aa13.63□□□□□ -0.23
SCN8A-202ENST00000355133 ZNF571Q7Z3V5 609 aaPredicted RBP13.63□□□□□ -0.23
SCN8A-202ENST00000355133 SRLQ86TD4 932 aa13.63□□□□□ -0.23
SCN8A-202ENST00000355133 REXO1L1PQ8IX06 675 aa13.63□□□□□ -0.23
SCN8A-202ENST00000355133 TSEN34Q9BSV6 310 aaKnown RBP13.63□□□□□ -0.23
SCN8A-202ENST00000355133 PABPC3Q9H361 631 aaKnown RBP13.63□□□□□ -0.23
SCN8A-202ENST00000355133 RRAGCQ9HB90 399 aa13.63□□□□□ -0.23
SCN8A-202ENST00000355133 HEY2Q9UBP5 337 aa13.63□□□□□ -0.23
SCN8A-202ENST00000355133 IPPQ9Y573 584 aa13.63□□□□□ -0.23
SCN8A-202ENST00000355133 SPACA6W5XKT8 324 aa13.63□□□□□ -0.23
SCN8A-202ENST00000355133 VCLP18206 1134 aa13.62□□□□□ -0.23
SCN8A-202ENST00000355133 CLK1P49759 484 aaKnown RBP13.62□□□□□ -0.23
SCN8A-202ENST00000355133 IRAK1P51617 712 aa13.62□□□□□ -0.23
SCN8A-202ENST00000355133 HERVK_113P62684 666 aa13.62□□□□□ -0.23
SCN8A-202ENST00000355133 STX5Q13190 355 aa13.62□□□□□ -0.23
SCN8A-202ENST00000355133 WLSQ5T9L3 541 aa13.62□□□□□ -0.23
SCN8A-202ENST00000355133 NT5DC3Q86UY8 548 aa13.62□□□□□ -0.23
SCN8A-202ENST00000355133 DNAJC9Q8WXX5 260 aa13.62□□□□□ -0.23
SCN8A-202ENST00000355133 CCT7Q99832 543 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms