RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 TARSP26639 723 aaKnown RBP8.27□□□□□ -1.09
HTT-201ENST00000355072 CAPN12Q6ZSI9 719 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 SH3BP5LQ7L8J4 393 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 GPD1LQ8N335 351 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 SFRP1Q8N474 314 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 TPCN2Q8NHX9 752 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 UPB1Q9UBR1 384 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 TARBP1Q13395 1621 aaKnown RBP8.27□□□□□ -1.09
HTT-201ENST00000355072 ADGRB2O60241 1585 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 TGM3Q08188 693 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 RFTN2Q52LD8 501 aaPredicted RBP8.27□□□□□ -1.09
HTT-201ENST00000355072 RSBN1Q5VWQ0 802 aaPredicted RBP8.27□□□□□ -1.09
HTT-201ENST00000355072 OR8H2Q8N162 312 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 PLEKHF1Q96S99 279 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 C17orf80Q9BSJ5 609 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 MSTO1Q9BUK6 570 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 CHID1Q9BWS9 393 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 INTS13Q9NVM9 706 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 KIAA1257Q9ULG3 409 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 SERPINA6P08185 405 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 ADD2P35612 726 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 PLK2Q9NYY3 685 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 IFT80Q9P2H3 777 aaPredicted RBP8.27□□□□□ -1.09
HTT-201ENST00000355072 ADAM28Q9UKQ2 775 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 C1orf232A0A0U1RR37 186 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 NCAM1P13591 858 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 STK40Q8N2I9 435 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 GALNT15Q8N3T1 639 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 ERMAPQ96PL5 475 aaPredicted RBP8.27□□□□□ -1.09
HTT-201ENST00000355072 NCAPHQ15003 741 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 PLCL1Q15111 1095 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 CCNYL1Q8N7R7 359 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 TTC29Q8NA56 475 aaPredicted RBP8.27□□□□□ -1.09
HTT-201ENST00000355072 GPCPD1Q9NPB8 672 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 TRIM10Q9UDY6 481 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 KIF13BQ9NQT8 1826 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 AFF2P51816 1311 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 NRXN1Q9ULB1 1477 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 QSOX1O00391 747 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 MGRN1O60291 552 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 ITGB6P18564 788 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 MAGEA8P43361 318 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 TCIRG1Q13488 830 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 QPRTQ15274 297 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 EPC2Q52LR7 807 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 RP9Q8TA86 221 aaKnown RBP8.27□□□□□ -1.09
HTT-201ENST00000355072 COX4I2Q96KJ9 171 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 KCTD14Q9BQ13 255 aaPredicted RBP8.27□□□□□ -1.09
HTT-201ENST00000355072 TCEAL7Q9BRU2 100 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 MCUBQ9NWR8 336 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 UMODL1Q5DID0 1318 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 CEP170BQ9Y4F5 1589 aaPredicted RBP8.27□□□□□ -1.09
HTT-201ENST00000355072 DGAT1O75907 488 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 ECM2O94769 699 aaPredicted RBP8.27□□□□□ -1.09
HTT-201ENST00000355072 YWHABP31946 246 aaKnown RBP8.27□□□□□ -1.09
HTT-201ENST00000355072 EIF6P56537 245 aaKnown RBP8.27□□□□□ -1.09
HTT-201ENST00000355072 SCN1BQ07699 218 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 LGALS3BPQ08380 585 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 CLEC16AQ2KHT3 1053 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 TUBGCP5Q96RT8 1024 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 PTBP2Q9UKA9 531 aaKnown RBP8.27□□□□□ -1.09
HTT-201ENST00000355072 CROTQ9UKG9 612 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 PARP4Q9UKK3 1724 aaKnown RBP8.27□□□□□ -1.09
HTT-201ENST00000355072 VCLP18206 1134 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 PRELPP51888 382 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 CACNA2D1P54289 1103 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 EIF4A1P60842 406 aaKnown RBP8.27□□□□□ -1.09
HTT-201ENST00000355072 AENQ8WTP8 325 aaKnown RBP8.27□□□□□ -1.09
HTT-201ENST00000355072 FCGR1BQ92637 280 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 SPATA5L1Q9BVQ7 753 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 COMMD9Q9P000 198 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 PI4KBQ9UBF8 816 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 NSFL1CQ9UNZ2 370 aaKnown RBP8.27□□□□□ -1.09
HTT-201ENST00000355072 PCDHGA10Q9Y5H3 936 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 EXTL3O43909 919 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 LDLRP01130 860 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 ATP1A1P05023 1023 aaKnown RBP8.27□□□□□ -1.09
HTT-201ENST00000355072 ACVR2BQ13705 512 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 LPIN1Q14693 890 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 RASSF6Q6ZTQ3 369 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 PKP3Q9Y446 797 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 SLC22A1O15245 554 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 CD4P01730 458 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 PCSK1P29120 753 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 PRCPP42785 496 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 EIF3EP60228 445 aaKnown RBP8.26□□□□□ -1.09
HTT-201ENST00000355072 KCNA1Q09470 495 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 PPM1NQ8N819 430 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 TNPO3Q9Y5L0 923 aaKnown RBP8.26□□□□□ -1.09
HTT-201ENST00000355072 KCNN4O15554 427 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 IFNA16P05015 189 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 IL6STP40189 918 aaPredicted RBP8.26□□□□□ -1.09
HTT-201ENST00000355072 QARSP47897 775 aaKnown RBP8.26□□□□□ -1.09
HTT-201ENST00000355072 CASP5P51878 434 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 USP39Q53GS9 565 aaKnown RBP8.26□□□□□ -1.09
HTT-201ENST00000355072 TMEM179Q6ZVK1 233 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 RNFT2Q96EX2 444 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 C12orf66Q96MD2 445 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 KPNA5O15131 536 aa8.26□□□□□ -1.09
HTT-201ENST00000355072 F9P00740 461 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms