RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 CRELD2Q6UXH1 353 aaPredicted RBP16.89■□□□□ 0.29
DDX55-202ENST00000354291 LRRC69Q6ZNQ3 347 aa16.89■□□□□ 0.29
DDX55-202ENST00000354291 BRAPQ7Z569 592 aa16.89■□□□□ 0.29
DDX55-202ENST00000354291 DDX42Q86XP3 938 aaKnown RBP eCLIP16.89■□□□□ 0.29
DDX55-202ENST00000354291 TMEM25Q86YD3 366 aa16.89■□□□□ 0.29
DDX55-202ENST00000354291 ETFBKMTQ8IXQ9 262 aa16.89■□□□□ 0.29
DDX55-202ENST00000354291 CSGALNACT2Q8N6G5 542 aa16.89■□□□□ 0.29
DDX55-202ENST00000354291 TERB1Q8NA31 727 aa16.89■□□□□ 0.29
DDX55-202ENST00000354291 KCNN1Q92952 543 aa16.89■□□□□ 0.29
DDX55-202ENST00000354291 MYLPFQ96A32 169 aa16.89■□□□□ 0.29
DDX55-202ENST00000354291 MRGPRX1Q96LB2 322 aa16.89■□□□□ 0.29
DDX55-202ENST00000354291 GPR174Q9BXC1 333 aa16.89■□□□□ 0.29
DDX55-202ENST00000354291 PRORYQ9H606 182 aa16.89■□□□□ 0.29
DDX55-202ENST00000354291 PARVGQ9HBI0 331 aa16.89■□□□□ 0.29
DDX55-202ENST00000354291 EHD2Q9NZN4 543 aa16.89■□□□□ 0.29
DDX55-202ENST00000354291 ODF2LQ9ULJ1 636 aa16.89■□□□□ 0.29
DDX55-202ENST00000354291 CABIN1Q9Y6J0 2220 aa16.89■□□□□ 0.29
DDX55-202ENST00000354291 E2F8A0AVK6 867 aa16.88■□□□□ 0.29
DDX55-202ENST00000354291 J3QKU1 62 aa16.88■□□□□ 0.29
DDX55-202ENST00000354291 CAPN9O14815 690 aa16.88■□□□□ 0.29
DDX55-202ENST00000354291 DKK1O94907 266 aa16.88■□□□□ 0.29
DDX55-202ENST00000354291 OLFM2O95897 454 aa16.88■□□□□ 0.29
DDX55-202ENST00000354291 PDGFRBP09619 1106 aa16.88■□□□□ 0.29
DDX55-202ENST00000354291 ZNF883P0CG24 379 aa16.88■□□□□ 0.29
DDX55-202ENST00000354291 NCAM1P13591 858 aa16.88■□□□□ 0.29
DDX55-202ENST00000354291 LMO2P25791 158 aa16.88■□□□□ 0.29
DDX55-202ENST00000354291 TAF10Q12962 218 aa16.88■□□□□ 0.29
DDX55-202ENST00000354291 IL27RAQ6UWB1 636 aa16.88■□□□□ 0.29
DDX55-202ENST00000354291 GPBP1Q86WP2 473 aa16.88■□□□□ 0.29
DDX55-202ENST00000354291 C1orf127Q8N9H9 656 aa16.88■□□□□ 0.29
DDX55-202ENST00000354291 BAHD1Q8TBE0 780 aaPredicted RBP16.88■□□□□ 0.29
DDX55-202ENST00000354291 DNASE2BQ8WZ79 361 aa16.88■□□□□ 0.29
DDX55-202ENST00000354291 POMGNT1Q8WZA1 660 aa16.88■□□□□ 0.29
DDX55-202ENST00000354291 TOE1Q96GM8 510 aaKnown RBP16.88■□□□□ 0.29
DDX55-202ENST00000354291 SYT15Q9BQS2 421 aa16.88■□□□□ 0.29
DDX55-202ENST00000354291 IKZF4Q9H2S9 585 aa16.88■□□□□ 0.29
DDX55-202ENST00000354291 BTBD3Q9Y2F9 522 aa16.88■□□□□ 0.29
DDX55-202ENST00000354291 SH3BP1Q9Y3L3 701 aa16.88■□□□□ 0.29
DDX55-202ENST00000354291 STARD13Q9Y3M8 1113 aa16.88■□□□□ 0.29
DDX55-202ENST00000354291 PLK4O00444 970 aa16.87■□□□□ 0.29
DDX55-202ENST00000354291 GABRDO14764 452 aa16.87■□□□□ 0.29
DDX55-202ENST00000354291 BCAT2O15382 392 aaPredicted RBP16.87■□□□□ 0.29
DDX55-202ENST00000354291 FLRT2O43155 660 aa16.87■□□□□ 0.29
DDX55-202ENST00000354291 OAS1P00973 400 aaKnown RBP16.87■□□□□ 0.29
DDX55-202ENST00000354291 KRT18P05783 430 aaKnown RBP16.87■□□□□ 0.29
DDX55-202ENST00000354291 HLA-EP13747 358 aa16.87■□□□□ 0.29
DDX55-202ENST00000354291 UBA7P41226 1012 aa16.87■□□□□ 0.29
DDX55-202ENST00000354291 GTF2BQ00403 316 aa16.87■□□□□ 0.29
DDX55-202ENST00000354291 BNC1Q01954 994 aa16.87■□□□□ 0.29
DDX55-202ENST00000354291 SUZ12Q15022 739 aaKnown RBP16.87■□□□□ 0.29
DDX55-202ENST00000354291 SOWAHAQ2M3V2 549 aa16.87■□□□□ 0.29
DDX55-202ENST00000354291 TDRD10Q5VZ19 366 aaKnown RBP16.87■□□□□ 0.29
DDX55-202ENST00000354291 GRAMD4Q6IC98 578 aa16.87■□□□□ 0.29
DDX55-202ENST00000354291 DHRS13Q6UX07 377 aa16.87■□□□□ 0.29
DDX55-202ENST00000354291 NT5DC4Q86YG4 428 aa16.87■□□□□ 0.29
DDX55-202ENST00000354291 TOP6BLQ8N6T0 577 aa16.87■□□□□ 0.29
DDX55-202ENST00000354291 CACTINQ8WUQ7 758 aaKnown RBP16.87■□□□□ 0.29
DDX55-202ENST00000354291 CALML4Q96GE6 196 aa16.87■□□□□ 0.29
DDX55-202ENST00000354291 FAM84AQ96KN4 292 aa16.87■□□□□ 0.29
DDX55-202ENST00000354291 FCRL3Q96P31 734 aaPredicted RBP16.87■□□□□ 0.29
DDX55-202ENST00000354291 TTLL2Q9BWV7 592 aa16.87■□□□□ 0.29
DDX55-202ENST00000354291 CD248Q9HCU0 757 aa16.87■□□□□ 0.29
DDX55-202ENST00000354291 SPHK2Q9NRA0 654 aa16.87■□□□□ 0.29
DDX55-202ENST00000354291 DNAJC17Q9NVM6 304 aaKnown RBP16.87■□□□□ 0.29
DDX55-202ENST00000354291 GDAP2Q9NXN4 497 aa16.87■□□□□ 0.29
DDX55-202ENST00000354291 MGAQ8IWI9 3026 aa16.87■□□□□ 0.29
DDX55-202ENST00000354291 WASH3PC4AMC7 463 aa16.86■□□□□ 0.29
DDX55-202ENST00000354291 F8VP50 259 aa16.86■□□□□ 0.29
DDX55-202ENST00000354291 HOXC11O43248 304 aaPredicted RBP16.86■□□□□ 0.29
DDX55-202ENST00000354291 PDCP20941 246 aa16.86■□□□□ 0.29
DDX55-202ENST00000354291 EIF2S3P41091 472 aaKnown RBP16.86■□□□□ 0.29
DDX55-202ENST00000354291 WNT7BP56706 349 aa16.86■□□□□ 0.29
DDX55-202ENST00000354291 POU5F1Q01860 360 aaKnown RBP16.86■□□□□ 0.29
DDX55-202ENST00000354291 SEMG2Q02383 582 aa16.86■□□□□ 0.29
DDX55-202ENST00000354291 SMAD1Q15797 465 aaKnown RBP16.86■□□□□ 0.29
DDX55-202ENST00000354291 TMEM119Q4V9L6 283 aa16.86■□□□□ 0.29
DDX55-202ENST00000354291 DCAF12L1Q5VU92 463 aa16.86■□□□□ 0.29
DDX55-202ENST00000354291 DBX2Q6ZNG2 339 aa16.86■□□□□ 0.29
DDX55-202ENST00000354291 BBS7Q8IWZ6 715 aa16.86■□□□□ 0.29
DDX55-202ENST00000354291 LRRC52Q8N7C0 313 aa16.86■□□□□ 0.29
DDX55-202ENST00000354291 LSM14AQ8ND56 463 aaKnown RBP16.86■□□□□ 0.29
DDX55-202ENST00000354291 SCFD1Q8WVM8 642 aa16.86■□□□□ 0.29
DDX55-202ENST00000354291 OTUB2Q96DC9 234 aa16.86■□□□□ 0.29
DDX55-202ENST00000354291 CEP295NLQ96MC4 621 aa16.86■□□□□ 0.29
DDX55-202ENST00000354291 SLITRK1Q96PX8 696 aa16.86■□□□□ 0.29
DDX55-202ENST00000354291 FAM213AQ9BRX8 229 aa16.86■□□□□ 0.29
DDX55-202ENST00000354291 CRTAC1Q9NQ79 661 aa16.86■□□□□ 0.29
DDX55-202ENST00000354291 WSB2Q9NYS7 404 aaPredicted RBP16.86■□□□□ 0.29
DDX55-202ENST00000354291 CDH9Q9ULB4 789 aa16.86■□□□□ 0.29
DDX55-202ENST00000354291 PCDHGB2Q9Y5G2 931 aa16.86■□□□□ 0.29
DDX55-202ENST00000354291 STYXL1Q9Y6J8 313 aa16.86■□□□□ 0.29
DDX55-202ENST00000354291 PTPRQQ9UMZ3 2332 aa16.86■□□□□ 0.29
DDX55-202ENST00000354291 SPTA1P02549 2419 aa16.85■□□□□ 0.29
DDX55-202ENST00000354291 A0A1B0GVT2 93 aa16.85■□□□□ 0.29
DDX55-202ENST00000354291 TRIM66O15016 1216 aa16.85■□□□□ 0.29
DDX55-202ENST00000354291 TNFSF14O43557 240 aa16.85■□□□□ 0.29
DDX55-202ENST00000354291 LONP1P36776 959 aaKnown RBP16.85■□□□□ 0.29
DDX55-202ENST00000354291 RBP5P82980 135 aa16.85■□□□□ 0.29
DDX55-202ENST00000354291 CUL4AQ13619 759 aa16.85■□□□□ 0.29
DDX55-202ENST00000354291 MAPRE1Q15691 268 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms