RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 SKOR1P84550 965 aa12.63□□□□□ -0.39
SMAD9-201ENST00000350148 ZNF792Q3KQV3 632 aa12.63□□□□□ -0.39
SMAD9-201ENST00000350148 HGSNATQ68CP4 663 aa12.63□□□□□ -0.39
SMAD9-201ENST00000350148 NUDT18Q6ZVK8 323 aa12.63□□□□□ -0.39
SMAD9-201ENST00000350148 IFNL1Q8IU54 200 aa12.63□□□□□ -0.39
SMAD9-201ENST00000350148 RNPEPQ9H4A4 650 aa12.63□□□□□ -0.39
SMAD9-201ENST00000350148 TRPA1O75762 1119 aa12.62□□□□□ -0.39
SMAD9-201ENST00000350148 CREMQ03060 361 aa12.62□□□□□ -0.39
SMAD9-201ENST00000350148 PRAMEF19Q5SWL8 479 aa12.62□□□□□ -0.39
SMAD9-201ENST00000350148 WDR75Q8IWA0 830 aaKnown RBP12.62□□□□□ -0.39
SMAD9-201ENST00000350148 ANKRD52Q8NB46 1076 aa12.62□□□□□ -0.39
SMAD9-201ENST00000350148 OR5B17Q8NGF7 314 aa12.62□□□□□ -0.39
SMAD9-201ENST00000350148 FBXL18Q96ME1 805 aa12.62□□□□□ -0.39
SMAD9-201ENST00000350148 ADAM2Q99965 735 aa12.62□□□□□ -0.39
SMAD9-201ENST00000350148 PITPNM3Q9BZ71 974 aa12.62□□□□□ -0.39
SMAD9-201ENST00000350148 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.62□□□□□ -0.39
SMAD9-201ENST00000350148 MGEA5O60502 916 aa12.62□□□□□ -0.39
SMAD9-201ENST00000350148 CAND2O75155 1236 aa12.62□□□□□ -0.39
SMAD9-201ENST00000350148 GPC4O75487 556 aa12.62□□□□□ -0.39
SMAD9-201ENST00000350148 CSDE1O75534 798 aaKnown RBP12.62□□□□□ -0.39
SMAD9-201ENST00000350148 AMHP03971 560 aa12.62□□□□□ -0.39
SMAD9-201ENST00000350148 URODP06132 367 aa12.62□□□□□ -0.39
SMAD9-201ENST00000350148 DNAJB2P25686 324 aa12.62□□□□□ -0.39
SMAD9-201ENST00000350148 ZNF200P98182 395 aaPredicted RBP12.62□□□□□ -0.39
SMAD9-201ENST00000350148 ARHGAP1Q07960 439 aa12.62□□□□□ -0.39
SMAD9-201ENST00000350148 SMARCB1Q12824 385 aa12.62□□□□□ -0.39
SMAD9-201ENST00000350148 MAMLD1Q13495 774 aa12.62□□□□□ -0.39
SMAD9-201ENST00000350148 RABGAP1LQ5R372 815 aa12.62□□□□□ -0.39
SMAD9-201ENST00000350148 GDF3Q9NR23 364 aa12.62□□□□□ -0.39
SMAD9-201ENST00000350148 PCDHGC3Q9UN70 934 aa12.62□□□□□ -0.39
SMAD9-201ENST00000350148 AAR2Q9Y312 384 aaKnown RBP12.62□□□□□ -0.39
SMAD9-201ENST00000350148 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.62□□□□□ -0.39
SMAD9-201ENST00000350148 MOXD2PA6NHM9 499 aa12.62□□□□□ -0.39
SMAD9-201ENST00000350148 ARHGAP15Q53QZ3 475 aa12.62□□□□□ -0.39
SMAD9-201ENST00000350148 APTXQ7Z2E3 356 aaKnown RBP12.62□□□□□ -0.39
SMAD9-201ENST00000350148 ITIH5Q86UX2 942 aa12.62□□□□□ -0.39
SMAD9-201ENST00000350148 DAW1Q8N136 415 aa12.62□□□□□ -0.39
SMAD9-201ENST00000350148 HELQQ8TDG4 1101 aa12.62□□□□□ -0.39
SMAD9-201ENST00000350148 FBXO32Q969P5 355 aa12.62□□□□□ -0.39
SMAD9-201ENST00000350148 TSPAN17Q96FV3 270 aa12.62□□□□□ -0.39
SMAD9-201ENST00000350148 HES6Q96HZ4 224 aa12.62□□□□□ -0.39
SMAD9-201ENST00000350148 DRG1Q9Y295 367 aaKnown RBP12.62□□□□□ -0.39
SMAD9-201ENST00000350148 TCHHQ07283 1943 aa12.62□□□□□ -0.39
SMAD9-201ENST00000350148 CHD4Q14839 1912 aa12.62□□□□□ -0.39
SMAD9-201ENST00000350148 A0A0U1RQJ8 604 aa12.62□□□□□ -0.39
SMAD9-201ENST00000350148 PPP1R37O75864 691 aa12.62□□□□□ -0.39
SMAD9-201ENST00000350148 APRTP07741 180 aa12.62□□□□□ -0.39
SMAD9-201ENST00000350148 GLI1P08151 1106 aa12.62□□□□□ -0.39
SMAD9-201ENST00000350148 PTPN1P18031 435 aaKnown RBP12.62□□□□□ -0.39
SMAD9-201ENST00000350148 TNFSF9P41273 254 aa12.62□□□□□ -0.39
SMAD9-201ENST00000350148 OTUD4Q01804 1114 aaKnown RBP12.62□□□□□ -0.39
SMAD9-201ENST00000350148 SMTNL2Q2TAL5 461 aa12.62□□□□□ -0.39
SMAD9-201ENST00000350148 DCLRE1AQ6PJP8 1040 aa12.62□□□□□ -0.39
SMAD9-201ENST00000350148 KAT5Q92993 513 aa12.62□□□□□ -0.39
SMAD9-201ENST00000350148 PDZD7Q9H5P4 517 aa12.62□□□□□ -0.39
SMAD9-201ENST00000350148 TLR8Q9NR97 1041 aaKnown RBP12.62□□□□□ -0.39
SMAD9-201ENST00000350148 TRIM17Q9Y577 477 aa12.62□□□□□ -0.39
SMAD9-201ENST00000350148 POLBP06746 335 aa12.61□□□□□ -0.39
SMAD9-201ENST00000350148 EDNRBP24530 442 aa12.61□□□□□ -0.39
SMAD9-201ENST00000350148 ZNF143P52747 638 aaPredicted RBP12.61□□□□□ -0.39
SMAD9-201ENST00000350148 AIF1P55008 147 aa12.61□□□□□ -0.39
SMAD9-201ENST00000350148 C10orf120Q5SQS8 335 aa12.61□□□□□ -0.39
SMAD9-201ENST00000350148 UNC45BQ8IWX7 931 aa12.61□□□□□ -0.39
SMAD9-201ENST00000350148 SMYD3Q9H7B4 428 aa12.61□□□□□ -0.39
SMAD9-201ENST00000350148 ANKZF1Q9H8Y5 726 aa12.61□□□□□ -0.39
SMAD9-201ENST00000350148 PIDD1Q9HB75 910 aa12.61□□□□□ -0.39
SMAD9-201ENST00000350148 ZFATQ9P243 1243 aa12.61□□□□□ -0.39
SMAD9-201ENST00000350148 RREB1Q92766 1687 aa12.61□□□□□ -0.39
SMAD9-201ENST00000350148 SPECC1L-ADORA2AF8WAN1 911 aa12.61□□□□□ -0.39
SMAD9-201ENST00000350148 NOS2P35228 1153 aa12.61□□□□□ -0.39
SMAD9-201ENST00000350148 AMHR2Q16671 573 aa12.61□□□□□ -0.39
SMAD9-201ENST00000350148 NBPF20Q3BBV1 942 aa12.61□□□□□ -0.39
SMAD9-201ENST00000350148 CHMP6Q96FZ7 201 aa12.61□□□□□ -0.39
SMAD9-201ENST00000350148 SERPINB11Q96P15 392 aa12.61□□□□□ -0.39
SMAD9-201ENST00000350148 TSPAN1O60635 241 aa12.61□□□□□ -0.39
SMAD9-201ENST00000350148 MTA2O94776 668 aa12.61□□□□□ -0.39
SMAD9-201ENST00000350148 EPHB2P29323 1055 aa12.61□□□□□ -0.39
SMAD9-201ENST00000350148 STX1BP61266 288 aa12.61□□□□□ -0.39
SMAD9-201ENST00000350148 ZIM3Q96PE6 472 aa12.61□□□□□ -0.39
SMAD9-201ENST00000350148 SPON2Q9BUD6 331 aa12.61□□□□□ -0.39
SMAD9-201ENST00000350148 TRABDQ9H4I3 376 aa12.61□□□□□ -0.39
SMAD9-201ENST00000350148 POPDC2Q9HBU9 364 aa12.61□□□□□ -0.39
SMAD9-201ENST00000350148 TRPM5Q9NZQ8 1165 aa12.61□□□□□ -0.39
SMAD9-201ENST00000350148 ST3GAL5Q9UNP4 418 aa12.61□□□□□ -0.39
SMAD9-201ENST00000350148 TNRC6CQ9HCJ0 1690 aaKnown RBP12.61□□□□□ -0.39
SMAD9-201ENST00000350148 CASTOR2A6NHX0 329 aa12.61□□□□□ -0.39
SMAD9-201ENST00000350148 EFCAB14O75071 495 aa12.61□□□□□ -0.39
SMAD9-201ENST00000350148 HSD17B3P37058 310 aa12.61□□□□□ -0.39
SMAD9-201ENST00000350148 MDH1P40925 334 aaKnown RBP12.61□□□□□ -0.39
SMAD9-201ENST00000350148 KCNJ1P48048 391 aa12.61□□□□□ -0.39
SMAD9-201ENST00000350148 TUFMP49411 452 aaKnown RBP12.61□□□□□ -0.39
SMAD9-201ENST00000350148 CTCFP49711 727 aaPredicted RBP12.61□□□□□ -0.39
SMAD9-201ENST00000350148 DRG2P55039 364 aaKnown RBP12.61□□□□□ -0.39
SMAD9-201ENST00000350148 PRAMEP78395 509 aa12.61□□□□□ -0.39
SMAD9-201ENST00000350148 PTK6Q13882 451 aa12.61□□□□□ -0.39
SMAD9-201ENST00000350148 TAF11Q15544 211 aa12.61□□□□□ -0.39
SMAD9-201ENST00000350148 NUGGCQ68CJ6 796 aa12.61□□□□□ -0.39
SMAD9-201ENST00000350148 CDCA2Q69YH5 1023 aaPredicted RBP12.61□□□□□ -0.39
SMAD9-201ENST00000350148 CHSY1Q86X52 802 aa12.61□□□□□ -0.39
SMAD9-201ENST00000350148 RAPGEF5Q92565 580 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms