RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 DEPDC4Q8N2C3 294 aa11.05□□□□□ -0.64
CAPN3-203ENST00000349748 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.05□□□□□ -0.64
CAPN3-203ENST00000349748 SDR42E1Q8WUS8 393 aa11.05□□□□□ -0.64
CAPN3-203ENST00000349748 OSCP1Q8WVF1 389 aa11.05□□□□□ -0.64
CAPN3-203ENST00000349748 SLC5A5Q92911 643 aa11.05□□□□□ -0.64
CAPN3-203ENST00000349748 PNMA5Q96PV4 448 aa11.05□□□□□ -0.64
CAPN3-203ENST00000349748 FAM111AQ96PZ2 611 aa11.05□□□□□ -0.64
CAPN3-203ENST00000349748 HERPUD2Q9BSE4 406 aa11.05□□□□□ -0.64
CAPN3-203ENST00000349748 MXD3Q9BW11 206 aa11.05□□□□□ -0.64
CAPN3-203ENST00000349748 GCNT4Q9P109 453 aa11.05□□□□□ -0.64
CAPN3-203ENST00000349748 ST14Q9Y5Y6 855 aa11.05□□□□□ -0.64
CAPN3-203ENST00000349748 DOCK2Q92608 1830 aa11.05□□□□□ -0.64
CAPN3-203ENST00000349748 NHSQ6T4R5 1651 aa11.05□□□□□ -0.64
CAPN3-203ENST00000349748 GIPC1O14908 333 aa11.05□□□□□ -0.64
CAPN3-203ENST00000349748 SORBS3O60504 671 aa11.05□□□□□ -0.64
CAPN3-203ENST00000349748 BANF1O75531 89 aa11.05□□□□□ -0.64
CAPN3-203ENST00000349748 RSL1D1O76021 490 aaKnown RBP11.05□□□□□ -0.64
CAPN3-203ENST00000349748 PSMC3P17980 439 aa11.05□□□□□ -0.64
CAPN3-203ENST00000349748 LMNB1P20700 586 aa11.05□□□□□ -0.64
CAPN3-203ENST00000349748 AQP5P55064 265 aa11.05□□□□□ -0.64
CAPN3-203ENST00000349748 PTK6Q13882 451 aa11.05□□□□□ -0.64
CAPN3-203ENST00000349748 NRF1Q16656 503 aa11.05□□□□□ -0.64
CAPN3-203ENST00000349748 UBE2SQ16763 222 aa11.05□□□□□ -0.64
CAPN3-203ENST00000349748 PGS1Q32NB8 556 aa11.05□□□□□ -0.64
CAPN3-203ENST00000349748 PRR23CQ6ZRP0 262 aa11.05□□□□□ -0.64
CAPN3-203ENST00000349748 RTKN2Q8IZC4 609 aa11.05□□□□□ -0.64
CAPN3-203ENST00000349748 JADE3Q92613 823 aa11.05□□□□□ -0.64
CAPN3-203ENST00000349748 MED30Q96HR3 178 aa11.05□□□□□ -0.64
CAPN3-203ENST00000349748 LRGUKQ96M69 825 aa11.05□□□□□ -0.64
CAPN3-203ENST00000349748 AK8Q96MA6 479 aa11.05□□□□□ -0.64
CAPN3-203ENST00000349748 TRIM56Q9BRZ2 755 aaKnown RBP11.05□□□□□ -0.64
CAPN3-203ENST00000349748 C2orf49Q9BVC5 232 aaPredicted RBP11.05□□□□□ -0.64
CAPN3-203ENST00000349748 VPS11Q9H270 941 aa11.05□□□□□ -0.64
CAPN3-203ENST00000349748 COPS7BQ9H9Q2 264 aaPredicted RBP11.05□□□□□ -0.64
CAPN3-203ENST00000349748 BCAP29Q9UHQ4 241 aa11.05□□□□□ -0.64
CAPN3-203ENST00000349748 PADI4Q9UM07 663 aa11.05□□□□□ -0.64
CAPN3-203ENST00000349748 ATP11BQ9Y2G3 1177 aa11.05□□□□□ -0.64
CAPN3-203ENST00000349748 C1orf232A0A0U1RR37 186 aa11.04□□□□□ -0.64
CAPN3-203ENST00000349748 GOLGA8CPA6NN73 597 aa11.04□□□□□ -0.64
CAPN3-203ENST00000349748 TBKBP1A7MCY6 615 aa11.04□□□□□ -0.64
CAPN3-203ENST00000349748 H0YIN7 160 aa11.04□□□□□ -0.64
CAPN3-203ENST00000349748 TNPO2O14787 897 aaKnown RBP11.04□□□□□ -0.64
CAPN3-203ENST00000349748 TGDSO95455 350 aa11.04□□□□□ -0.64
CAPN3-203ENST00000349748 NR2F2P24468 414 aa11.04□□□□□ -0.64
CAPN3-203ENST00000349748 IFNA8P32881 189 aa11.04□□□□□ -0.64
CAPN3-203ENST00000349748 BCAMP50895 628 aa11.04□□□□□ -0.64
CAPN3-203ENST00000349748 IST1P53990 364 aa11.04□□□□□ -0.64
CAPN3-203ENST00000349748 CREB5Q02930 508 aa11.04□□□□□ -0.64
CAPN3-203ENST00000349748 PARP10Q53GL7 1025 aa11.04□□□□□ -0.64
CAPN3-203ENST00000349748 AARS2Q5JTZ9 985 aaKnown RBP11.04□□□□□ -0.64
CAPN3-203ENST00000349748 FAM26FQ5R3K3 315 aa11.04□□□□□ -0.64
CAPN3-203ENST00000349748 RARS2Q5T160 578 aaKnown RBP11.04□□□□□ -0.64
CAPN3-203ENST00000349748 IGFN1Q86VF2 1251 aa11.04□□□□□ -0.64
CAPN3-203ENST00000349748 KIAA2013Q8IYS2 634 aa11.04□□□□□ -0.64
CAPN3-203ENST00000349748 ATP6V0D2Q8N8Y2 350 aa11.04□□□□□ -0.64
CAPN3-203ENST00000349748 FBXL18Q96ME1 805 aa11.04□□□□□ -0.64
CAPN3-203ENST00000349748 EBF4Q9BQW3 602 aa11.04□□□□□ -0.64
CAPN3-203ENST00000349748 NAA50Q9GZZ1 169 aaKnown RBP11.04□□□□□ -0.64
CAPN3-203ENST00000349748 HIPK3Q9H422 1215 aa11.04□□□□□ -0.64
CAPN3-203ENST00000349748 H3BMQ9 156 aa11.04□□□□□ -0.64
CAPN3-203ENST00000349748 NTSR2O95665 410 aa11.04□□□□□ -0.64
CAPN3-203ENST00000349748 BDNFP23560 247 aa11.04□□□□□ -0.64
CAPN3-203ENST00000349748 CXCR2P25025 360 aa11.04□□□□□ -0.64
CAPN3-203ENST00000349748 CALML3P27482 149 aa11.04□□□□□ -0.64
CAPN3-203ENST00000349748 GRM5P41594 1212 aa11.04□□□□□ -0.64
CAPN3-203ENST00000349748 EIF3EP60228 445 aaKnown RBP11.04□□□□□ -0.64
CAPN3-203ENST00000349748 EVX2Q03828 476 aa11.04□□□□□ -0.64
CAPN3-203ENST00000349748 ZNF746Q6NUN9 644 aaPredicted RBP11.04□□□□□ -0.64
CAPN3-203ENST00000349748 RALGPS2Q86X27 583 aaPredicted RBP11.04□□□□□ -0.64
CAPN3-203ENST00000349748 DTX3Q8N9I9 347 aa11.04□□□□□ -0.64
CAPN3-203ENST00000349748 FEM1CQ96JP0 617 aa11.04□□□□□ -0.64
CAPN3-203ENST00000349748 COG8Q96MW5 612 aa11.04□□□□□ -0.64
CAPN3-203ENST00000349748 SLC2A11Q9BYW1 496 aa11.04□□□□□ -0.64
CAPN3-203ENST00000349748 PDGFDQ9GZP0 370 aaPredicted RBP11.04□□□□□ -0.64
CAPN3-203ENST00000349748 RPF2Q9H7B2 306 aaKnown RBP11.04□□□□□ -0.64
CAPN3-203ENST00000349748 BCORQ6W2J9 1755 aa11.04□□□□□ -0.64
CAPN3-203ENST00000349748 CCDC195A0A1B0GUA6 201 aa11.04□□□□□ -0.64
CAPN3-203ENST00000349748 PDE8AO60658 829 aa11.04□□□□□ -0.64
CAPN3-203ENST00000349748 ZMPSTE24O75844 475 aa11.04□□□□□ -0.64
CAPN3-203ENST00000349748 H6PDO95479 791 aa11.04□□□□□ -0.64
CAPN3-203ENST00000349748 ABHD2P08910 425 aa11.04□□□□□ -0.64
CAPN3-203ENST00000349748 EIF2AK2P19525 551 aaKnown RBP11.04□□□□□ -0.64
CAPN3-203ENST00000349748 ANXA13P27216 316 aa11.04□□□□□ -0.64
CAPN3-203ENST00000349748 MSX2P35548 267 aaPredicted RBP11.04□□□□□ -0.64
CAPN3-203ENST00000349748 STAT2P52630 851 aa11.04□□□□□ -0.64
CAPN3-203ENST00000349748 ATXN3P54252 364 aaPredicted RBP11.04□□□□□ -0.64
CAPN3-203ENST00000349748 MRPS22P82650 360 aaKnown RBP11.04□□□□□ -0.64
CAPN3-203ENST00000349748 KRT76Q01546 638 aa11.04□□□□□ -0.64
CAPN3-203ENST00000349748 MTM1Q13496 603 aa11.04□□□□□ -0.64
CAPN3-203ENST00000349748 EPHA7Q15375 998 aa11.04□□□□□ -0.64
CAPN3-203ENST00000349748 CEP78Q5JTW2 689 aa11.04□□□□□ -0.64
CAPN3-203ENST00000349748 GPR107Q5VW38 600 aa11.04□□□□□ -0.64
CAPN3-203ENST00000349748 GALNT18Q6P9A2 607 aa11.04□□□□□ -0.64
CAPN3-203ENST00000349748 PGM2L1Q6PCE3 622 aa11.04□□□□□ -0.64
CAPN3-203ENST00000349748 CYP4V2Q6ZWL3 525 aaPredicted RBP11.04□□□□□ -0.64
CAPN3-203ENST00000349748 TAS2R42Q7RTR8 314 aa11.04□□□□□ -0.64
CAPN3-203ENST00000349748 LYSMD3Q7Z3D4 306 aa11.04□□□□□ -0.64
CAPN3-203ENST00000349748 TDRPQ86YL5 185 aa11.04□□□□□ -0.64
CAPN3-203ENST00000349748 DEFB107AQ8IZN7 70 aa11.04□□□□□ -0.64
CAPN3-203ENST00000349748 NLRP7Q8WX94 980 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms