RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 MYRFLQ96LU7 910 aa28.38■■■□□ 2.13
SSBP4-202ENST00000348495 PLEKHA4Q9H4M7 779 aa28.38■■■□□ 2.13
SSBP4-202ENST00000348495 PALMO75781 387 aa28.38■■■□□ 2.13
SSBP4-202ENST00000348495 IFRD2Q12894 506 aaPredicted RBP28.38■■■□□ 2.13
SSBP4-202ENST00000348495 SLFN11Q7Z7L1 901 aa28.38■■■□□ 2.13
SSBP4-202ENST00000348495 TRIM58Q8NG06 486 aa28.38■■■□□ 2.13
SSBP4-202ENST00000348495 HDAC7Q8WUI4 952 aa28.38■■■□□ 2.13
SSBP4-202ENST00000348495 ZNF638Q14966 1978 aaKnown RBP28.37■■■□□ 2.13
SSBP4-202ENST00000348495 MYO1FO00160 1098 aa28.37■■■□□ 2.13
SSBP4-202ENST00000348495 FYNP06241 537 aa28.37■■■□□ 2.13
SSBP4-202ENST00000348495 CSH1P0DML2 217 aa28.37■■■□□ 2.13
SSBP4-202ENST00000348495 CSH2P0DML3 217 aa28.37■■■□□ 2.13
SSBP4-202ENST00000348495 EPCAMP16422 314 aa28.37■■■□□ 2.13
SSBP4-202ENST00000348495 EPHB3P54753 998 aa28.37■■■□□ 2.13
SSBP4-202ENST00000348495 RNASE9P60153 205 aaKnown RBP28.37■■■□□ 2.13
SSBP4-202ENST00000348495 C11orf63Q6NUN7 778 aa28.37■■■□□ 2.13
SSBP4-202ENST00000348495 SCD5Q86SK9 330 aa28.37■■■□□ 2.13
SSBP4-202ENST00000348495 RBM23Q86U06 439 aaKnown RBP28.37■■■□□ 2.13
SSBP4-202ENST00000348495 SLC2A13Q96QE2 648 aa28.37■■■□□ 2.13
SSBP4-202ENST00000348495 TLE6Q9H808 572 aa28.37■■■□□ 2.13
SSBP4-202ENST00000348495 MYO16Q9Y6X6 1858 aa28.36■■■□□ 2.13
SSBP4-202ENST00000348495 DAB1O75553 588 aa28.36■■■□□ 2.13
SSBP4-202ENST00000348495 LTFP02788 710 aa28.36■■■□□ 2.13
SSBP4-202ENST00000348495 PGFP49763 221 aa28.36■■■□□ 2.13
SSBP4-202ENST00000348495 ZNF569Q5MCW4 686 aa28.36■■■□□ 2.13
SSBP4-202ENST00000348495 PRPF38BQ5VTL8 546 aaKnown RBP28.36■■■□□ 2.13
SSBP4-202ENST00000348495 PSMG2Q969U7 264 aa28.36■■■□□ 2.13
SSBP4-202ENST00000348495 TRMT2BQ96GJ1 504 aaKnown RBP28.36■■■□□ 2.13
SSBP4-202ENST00000348495 C16orf45Q96MC5 204 aaPredicted RBP28.36■■■□□ 2.13
SSBP4-202ENST00000348495 TTYH1Q9H313 450 aaPredicted RBP28.36■■■□□ 2.13
SSBP4-202ENST00000348495 MAN1C1Q9NR34 630 aa28.36■■■□□ 2.13
SSBP4-202ENST00000348495 EHD2Q9NZN4 543 aa28.36■■■□□ 2.13
SSBP4-202ENST00000348495 IP6K2Q9UHH9 426 aa28.36■■■□□ 2.13
SSBP4-202ENST00000348495 LCMT1Q9UIC8 334 aa28.36■■■□□ 2.13
SSBP4-202ENST00000348495 HCFC2Q9Y5Z7 792 aa28.36■■■□□ 2.13
SSBP4-202ENST00000348495 VEPH1Q14D04 833 aa28.35■■■□□ 2.13
SSBP4-202ENST00000348495 BEND5Q7L4P6 421 aa28.35■■■□□ 2.13
SSBP4-202ENST00000348495 MON1AQ86VX9 555 aa28.35■■■□□ 2.13
SSBP4-202ENST00000348495 NIPA2Q8N8Q9 360 aa28.35■■■□□ 2.13
SSBP4-202ENST00000348495 RXFP2Q8WXD0 754 aa28.35■■■□□ 2.13
SSBP4-202ENST00000348495 FBXO32Q969P5 355 aa28.35■■■□□ 2.13
SSBP4-202ENST00000348495 FAM149B1Q96BN6 582 aa28.35■■■□□ 2.13
SSBP4-202ENST00000348495 ALS2CR12Q96Q35 445 aa28.35■■■□□ 2.13
SSBP4-202ENST00000348495 GOLPH3Q9H4A6 298 aa28.35■■■□□ 2.13
SSBP4-202ENST00000348495 POPDC2Q9HBU9 364 aa28.35■■■□□ 2.13
SSBP4-202ENST00000348495 ASB3Q9Y575 518 aa28.35■■■□□ 2.13
SSBP4-202ENST00000348495 CDH23Q9H251 3354 aa28.35■■■□□ 2.13
SSBP4-202ENST00000348495 DPYSL4O14531 572 aa28.35■■■□□ 2.13
SSBP4-202ENST00000348495 ZMYND10O75800 440 aa28.35■■■□□ 2.13
SSBP4-202ENST00000348495 PROSCO94903 275 aa28.35■■■□□ 2.13
SSBP4-202ENST00000348495 GPD1P21695 349 aa28.35■■■□□ 2.13
SSBP4-202ENST00000348495 ZNF143P52747 638 aaPredicted RBP28.35■■■□□ 2.13
SSBP4-202ENST00000348495 GNG11P61952 73 aa28.35■■■□□ 2.13
SSBP4-202ENST00000348495 ETF1P62495 437 aaKnown RBP28.35■■■□□ 2.13
SSBP4-202ENST00000348495 TAF10Q12962 218 aa28.35■■■□□ 2.13
SSBP4-202ENST00000348495 KCNC3Q14003 757 aa28.35■■■□□ 2.13
SSBP4-202ENST00000348495 MESDQ14696 234 aa28.35■■■□□ 2.13
SSBP4-202ENST00000348495 BSPRYQ5W0U4 402 aa28.35■■■□□ 2.13
SSBP4-202ENST00000348495 DNAJB7Q7Z6W7 309 aaPredicted RBP28.35■■■□□ 2.13
SSBP4-202ENST00000348495 CDCA3Q99618 268 aaPredicted RBP28.35■■■□□ 2.13
SSBP4-202ENST00000348495 NMUR1Q9HB89 426 aa28.35■■■□□ 2.13
SSBP4-202ENST00000348495 ZDHHC11BP0C7U3 371 aa28.34■■■□□ 2.13
SSBP4-202ENST00000348495 PDGFRAP16234 1089 aa28.34■■■□□ 2.13
SSBP4-202ENST00000348495 MATKP42679 507 aa28.34■■■□□ 2.13
SSBP4-202ENST00000348495 NRIP1P48552 1158 aa28.34■■■□□ 2.13
SSBP4-202ENST00000348495 YWHAGP61981 247 aaKnown RBP eCLIP28.34■■■□□ 2.13
SSBP4-202ENST00000348495 DAAM2Q86T65 1068 aa28.34■■■□□ 2.13
SSBP4-202ENST00000348495 DEFB106AQ8N104 65 aa28.34■■■□□ 2.13
SSBP4-202ENST00000348495 SLC35F6Q8N357 371 aa28.34■■■□□ 2.13
SSBP4-202ENST00000348495 WDR24Q96S15 920 aa28.34■■■□□ 2.13
SSBP4-202ENST00000348495 DDX23Q9BUQ8 820 aaKnown RBP28.34■■■□□ 2.13
SSBP4-202ENST00000348495 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP28.34■■■□□ 2.133e-6■■■■□ 24.8
SSBP4-202ENST00000348495 GMIPQ9P107 970 aa28.34■■■□□ 2.13
SSBP4-202ENST00000348495 ALG6Q9Y672 507 aa28.34■■■□□ 2.13
SSBP4-202ENST00000348495 MYO9BQ13459 2157 aa28.34■■■□□ 2.13
SSBP4-202ENST00000348495 FANCGO15287 622 aa28.33■■■□□ 2.13
SSBP4-202ENST00000348495 LRG1P02750 347 aa28.33■■■□□ 2.13
SSBP4-202ENST00000348495 HOXA9P31269 272 aa28.33■■■□□ 2.13
SSBP4-202ENST00000348495 MAN1A1P33908 653 aa28.33■■■□□ 2.13
SSBP4-202ENST00000348495 PIGHQ14442 188 aaPredicted RBP28.33■■■□□ 2.13
SSBP4-202ENST00000348495 CCDC14Q49A88 953 aa28.33■■■□□ 2.13
SSBP4-202ENST00000348495 ITIH5Q86UX2 942 aa28.33■■■□□ 2.13
SSBP4-202ENST00000348495 CNPY3Q9BT09 278 aa28.33■■■□□ 2.13
SSBP4-202ENST00000348495 OSER1Q9NX31 292 aa28.33■■■□□ 2.13
SSBP4-202ENST00000348495 MAGED2Q9UNF1 606 aaPredicted RBP28.33■■■□□ 2.13
SSBP4-202ENST00000348495 A0A1W2PQH9 124 aa28.32■■■□□ 2.12
SSBP4-202ENST00000348495 PTPN9P43378 593 aa28.32■■■□□ 2.12
SSBP4-202ENST00000348495 PPM1LQ5SGD2 360 aa28.32■■■□□ 2.12
SSBP4-202ENST00000348495 SYPL2Q5VXT5 272 aa28.32■■■□□ 2.12
SSBP4-202ENST00000348495 SYCE1Q8N0S2 351 aa28.32■■■□□ 2.12
SSBP4-202ENST00000348495 ARHGAP18Q8N392 663 aa28.32■■■□□ 2.12
SSBP4-202ENST00000348495 OVCA2Q8WZ82 227 aa28.32■■■□□ 2.12
SSBP4-202ENST00000348495 NT5C3BQ969T7 300 aa28.32■■■□□ 2.12
SSBP4-202ENST00000348495 SLITRK1Q96PX8 696 aa28.32■■■□□ 2.12
SSBP4-202ENST00000348495 TRIM62Q9BVG3 475 aa28.32■■■□□ 2.12
SSBP4-202ENST00000348495 DPP7Q9UHL4 492 aa28.32■■■□□ 2.12
SSBP4-202ENST00000348495 NAALADL1Q9UQQ1 740 aa28.32■■■□□ 2.12
SSBP4-202ENST00000348495 SOX1O00570 391 aaPredicted RBP28.32■■■□□ 2.12
SSBP4-202ENST00000348495 PSMA2P25787 234 aa28.32■■■□□ 2.12
SSBP4-202ENST00000348495 NOS2P35228 1153 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms