RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 GRM1Q13255 1194 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 SURF1Q15526 300 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 OLFML1Q6UWY5 402 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 PLPPR4Q7Z2D5 763 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 SLC16A10Q8TF71 515 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 PYROXD1Q8WU10 500 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 AFG1LQ8WV93 481 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 KLHL29Q96CT2 875 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 HPDLQ96IR7 371 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 MIS12Q9H081 205 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 SLC24A3Q9HC58 644 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 ARL8BQ9NVJ2 186 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 TNFSF13BQ9Y275 285 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 TTLL3Q9Y4R7 772 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 CEP83Q9Y592 693 aa6.31□□□□□ -1.4
CLCN3-201ENST00000347613 NUP205Q92621 2012 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 H0YCG3 227 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 NOP56O00567 594 aaKnown RBP6.3□□□□□ -1.4
CLCN3-201ENST00000347613 SUN1O94901 812 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 LGALS2P05162 132 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 GSTA1P08263 222 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 CSH1P0DML2 217 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 CSH2P0DML3 217 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 CCDC130P13994 396 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 AKAP5P24588 427 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 ABL2P42684 1182 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 EFNA5P52803 228 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 YWHAEP62258 255 aaKnown RBP6.3□□□□□ -1.4
CLCN3-201ENST00000347613 YWHAZP63104 245 aaKnown RBP6.3□□□□□ -1.4
CLCN3-201ENST00000347613 KIZQ2M2Z5 673 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 PRAMEF19Q5SWL8 479 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 PPIL6Q8IXY8 311 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 CCDC185Q8N715 623 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 MAIP1Q8WWC4 291 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 FAM111AQ96PZ2 611 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 ACSS3Q9H6R3 686 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 EBF2Q9HAK2 575 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 GBA2Q9HCG7 927 aaPredicted RBP6.3□□□□□ -1.4
CLCN3-201ENST00000347613 ACSS2Q9NR19 701 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 SNTG2Q9NY99 539 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 CNTN3Q9P232 1028 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 GINS2Q9Y248 185 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 FAM237BA0A1B0GVD1 139 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 E2F8A0AVK6 867 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 MEIS3P2A8K0S8 358 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 NPTXRO95502 500 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 SNAI1O95863 264 aaPredicted RBP6.3□□□□□ -1.4
CLCN3-201ENST00000347613 TGFB3P10600 412 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 PDGFRAP16234 1089 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 GTF2A2P52657 109 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 ZNF200P98182 395 aaPredicted RBP6.3□□□□□ -1.4
CLCN3-201ENST00000347613 MXD4Q14582 209 aaPredicted RBP6.3□□□□□ -1.4
CLCN3-201ENST00000347613 NOMO1Q15155 1222 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 ZNF667Q5HYK9 610 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 FAM160B1Q5W0V3 765 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 SCYL2Q6P3W7 929 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 DSTYKQ6XUX3 929 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 ARHGEF18Q6ZSZ5 1173 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 POLNQ7Z5Q5 900 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 ALYREFQ86V81 257 aaKnown RBP6.3□□□□□ -1.4
CLCN3-201ENST00000347613 GPC2Q8N158 579 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 FAM13CQ8NE31 585 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 NSMCE1Q8WV22 266 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 OPTNQ96CV9 577 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 OXNAD1Q96HP4 312 aaPredicted RBP6.3□□□□□ -1.4
CLCN3-201ENST00000347613 TACO1Q9BSH4 297 aaKnown RBP6.3□□□□□ -1.4
CLCN3-201ENST00000347613 TBC1D10AQ9BXI6 508 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 RPF1Q9H9Y2 349 aaKnown RBP6.3□□□□□ -1.4
CLCN3-201ENST00000347613 TMEM30AQ9NV96 361 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 ARMCX1Q9P291 453 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 SHOC2Q9UQ13 582 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 STARD13Q9Y3M8 1113 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 ACTL7BQ9Y614 415 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 PLXNB2O15031 1838 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 REV3LO60673 3130 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 APOC4-APOC2K7ER74 178 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 DIAPH2O60879 1101 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 RFPL1O75677 317 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 SORBS2O94875 1100 aaKnown RBP6.3□□□□□ -1.4
CLCN3-201ENST00000347613 APOC2P02655 101 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 PDGFRBP09619 1106 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 NEK3P51956 506 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 ZNF143P52747 638 aaPredicted RBP6.3□□□□□ -1.4
CLCN3-201ENST00000347613 YARSP54577 528 aaKnown RBP6.3□□□□□ -1.4
CLCN3-201ENST00000347613 SOX4Q06945 474 aaPredicted RBP6.3□□□□□ -1.4
CLCN3-201ENST00000347613 ACVR2BQ13705 512 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 OTUD1Q5VV17 481 aaPredicted RBP6.3□□□□□ -1.4
CLCN3-201ENST00000347613 OR6B2Q6IFH4 312 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 RFX8Q6ZV50 586 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 CENPUQ71F23 418 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 ARMCX2Q7L311 632 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 ARRDC4Q8NCT1 418 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 ATP2A3Q93084 1043 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 CFAP36Q96G28 342 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 ANKRD36BP1Q96IX9 119 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 RNF157Q96PX1 679 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 ADPGKQ9BRR6 497 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 SNRNP25Q9BV90 132 aaKnown RBP6.3□□□□□ -1.4
CLCN3-201ENST00000347613 ZNF518BQ9C0D4 1074 aa6.3□□□□□ -1.4
CLCN3-201ENST00000347613 POPDC2Q9HBU9 364 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms