RNA–Protein interactions for RNA: ENST00000346798.7

APP-201, Transcript of amyloid beta precursor protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APP, Length 3,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-201ENST00000346798 RNF220Q5VTB9 566 aa12.33□□□□□ -0.44
APP-201ENST00000346798 TRMT10BQ6PF06 316 aaKnown RBP12.33□□□□□ -0.44
APP-201ENST00000346798 NUDCD3Q8IVD9 361 aa12.33□□□□□ -0.44
APP-201ENST00000346798 UNC5BQ8IZJ1 945 aa12.33□□□□□ -0.44
APP-201ENST00000346798 NIPA2Q8N8Q9 360 aa12.33□□□□□ -0.44
APP-201ENST00000346798 DHRS4Q9BTZ2 278 aa12.33□□□□□ -0.44
APP-201ENST00000346798 ELOVL4Q9GZR5 314 aa12.33□□□□□ -0.44
APP-201ENST00000346798 PPCSQ9HAB8 311 aa12.33□□□□□ -0.44
APP-201ENST00000346798 PIDD1Q9HB75 910 aa12.33□□□□□ -0.44
APP-201ENST00000346798 MED7O43513 233 aa12.32□□□□□ -0.44
APP-201ENST00000346798 ETV4P43268 484 aa12.32□□□□□ -0.44
APP-201ENST00000346798 CCNG1P51959 295 aa12.32□□□□□ -0.44
APP-201ENST00000346798 PTPN11Q06124 597 aaPredicted RBP12.32□□□□□ -0.44
APP-201ENST00000346798 ATF7IP2Q5U623 682 aa12.32□□□□□ -0.44
APP-201ENST00000346798 NDUFAF2Q8N183 169 aa12.32□□□□□ -0.44
APP-201ENST00000346798 ENDOVQ8N8Q3 282 aaKnown RBP12.32□□□□□ -0.44
APP-201ENST00000346798 R3HDMLQ9H3Y0 253 aa12.32□□□□□ -0.44
APP-201ENST00000346798 LNPEPQ9UIQ6 1025 aa12.32□□□□□ -0.44
APP-201ENST00000346798 CPSF3Q9UKF6 684 aaKnown RBP12.32□□□□□ -0.44
APP-201ENST00000346798 ARID2Q68CP9 1835 aa12.32□□□□□ -0.44
APP-201ENST00000346798 FAM189A1O60320 539 aa12.32□□□□□ -0.44
APP-201ENST00000346798 KRT37O76014 449 aa12.32□□□□□ -0.44
APP-201ENST00000346798 FARP2O94887 1054 aaPredicted RBP12.32□□□□□ -0.44
APP-201ENST00000346798 ABCD1P33897 745 aa12.32□□□□□ -0.44
APP-201ENST00000346798 GRIA1P42261 906 aa12.32□□□□□ -0.44
APP-201ENST00000346798 BCAR1P56945 870 aa12.32□□□□□ -0.44
APP-201ENST00000346798 YWHAZP63104 245 aaKnown RBP12.32□□□□□ -0.44
APP-201ENST00000346798 HSDL1Q3SXM5 330 aa12.32□□□□□ -0.44
APP-201ENST00000346798 C16orf46Q6P387 395 aa12.32□□□□□ -0.44
APP-201ENST00000346798 LRRC74BQ6ZQY2 392 aa12.32□□□□□ -0.44
APP-201ENST00000346798 SLC26A11Q86WA9 606 aa12.32□□□□□ -0.44
APP-201ENST00000346798 SMC1BQ8NDV3 1235 aa12.32□□□□□ -0.44
APP-201ENST00000346798 HIPK4Q8NE63 616 aa12.32□□□□□ -0.44
APP-201ENST00000346798 SKA1Q96BD8 255 aa12.32□□□□□ -0.44
APP-201ENST00000346798 MMP19Q99542 508 aa12.32□□□□□ -0.44
APP-201ENST00000346798 MIS12Q9H081 205 aa12.32□□□□□ -0.44
APP-201ENST00000346798 TMEM134Q9H6X4 195 aa12.32□□□□□ -0.44
APP-201ENST00000346798 MINDY3Q9H8M7 445 aa12.32□□□□□ -0.44
APP-201ENST00000346798 RPF1Q9H9Y2 349 aaKnown RBP12.32□□□□□ -0.44
APP-201ENST00000346798 RSAD1Q9HA92 442 aa12.32□□□□□ -0.44
APP-201ENST00000346798 AS3MTQ9HBK9 375 aa12.32□□□□□ -0.44
APP-201ENST00000346798 PCDHGC3Q9UN70 934 aa12.32□□□□□ -0.44
APP-201ENST00000346798 TEX264Q9Y6I9 313 aa12.32□□□□□ -0.44
APP-201ENST00000346798 SPDYE16A6NNV3 312 aaPredicted RBP12.32□□□□□ -0.44
APP-201ENST00000346798 E7ESA3 106 aa12.32□□□□□ -0.44
APP-201ENST00000346798 TRAFD1O14545 582 aaPredicted RBP12.32□□□□□ -0.44
APP-201ENST00000346798 USP1O94782 785 aa12.32□□□□□ -0.44
APP-201ENST00000346798 PTPN7P35236 360 aa12.32□□□□□ -0.44
APP-201ENST00000346798 GMPRP36959 345 aa12.32□□□□□ -0.44
APP-201ENST00000346798 GMPSP49915 693 aaPredicted RBP12.32□□□□□ -0.44
APP-201ENST00000346798 NEK3P51956 506 aa12.32□□□□□ -0.44
APP-201ENST00000346798 UBAP2LQ14157 1087 aaKnown RBP12.32□□□□□ -0.44
APP-201ENST00000346798 ZPBP2Q6X784 338 aa12.32□□□□□ -0.44
APP-201ENST00000346798 MPP5Q8N3R9 675 aa12.32□□□□□ -0.44
APP-201ENST00000346798 SLC4A11Q8NBS3 891 aa12.32□□□□□ -0.44
APP-201ENST00000346798 MTMR14Q8NCE2 650 aa12.32□□□□□ -0.44
APP-201ENST00000346798 PPFIBP2Q8ND30 876 aa12.32□□□□□ -0.44
APP-201ENST00000346798 SHKBP1Q8TBC3 707 aa12.32□□□□□ -0.44
APP-201ENST00000346798 E2F7Q96AV8 911 aa12.32□□□□□ -0.44
APP-201ENST00000346798 ZBED3Q96IU2 234 aaPredicted RBP12.32□□□□□ -0.44
APP-201ENST00000346798 ZNF333Q96JL9 665 aa12.32□□□□□ -0.44
APP-201ENST00000346798 APOL6Q9BWW8 343 aa12.32□□□□□ -0.44
APP-201ENST00000346798 SMYD2Q9NRG4 433 aa12.32□□□□□ -0.44
APP-201ENST00000346798 ASNSD1Q9NWL6 643 aa12.32□□□□□ -0.44
APP-201ENST00000346798 COL11A1P12107 1806 aaPredicted RBP12.32□□□□□ -0.44
APP-201ENST00000346798 NDC80O14777 642 aa12.31□□□□□ -0.44
APP-201ENST00000346798 ATG7O95352 703 aa12.31□□□□□ -0.44
APP-201ENST00000346798 PGK2P07205 417 aa12.31□□□□□ -0.44
APP-201ENST00000346798 ENPEPQ07075 957 aa12.31□□□□□ -0.44
APP-201ENST00000346798 CA9Q16790 459 aa12.31□□□□□ -0.44
APP-201ENST00000346798 TTC39BQ5VTQ0 682 aaPredicted RBP12.31□□□□□ -0.44
APP-201ENST00000346798 CES4AQ5XG92 561 aa12.31□□□□□ -0.44
APP-201ENST00000346798 TRNP1Q6NT89 227 aa12.31□□□□□ -0.44
APP-201ENST00000346798 POU5F2Q8N7G0 328 aa12.31□□□□□ -0.44
APP-201ENST00000346798 C1orf127Q8N9H9 656 aa12.31□□□□□ -0.44
APP-201ENST00000346798 RBM15BQ8NDT2 890 aaKnown RBP12.31□□□□□ -0.44
APP-201ENST00000346798 EBF4Q9BQW3 602 aa12.31□□□□□ -0.44
APP-201ENST00000346798 FAM49BQ9NUQ9 324 aa12.31□□□□□ -0.44
APP-201ENST00000346798 SIX4Q9UIU6 781 aa12.31□□□□□ -0.44
APP-201ENST00000346798 ARHGAP42A6NI28 874 aa12.31□□□□□ -0.44
APP-201ENST00000346798 LYPLA1O75608 230 aaPredicted RBP12.31□□□□□ -0.44
APP-201ENST00000346798 F7P08709 466 aaPredicted RBP12.31□□□□□ -0.44
APP-201ENST00000346798 SNRPAP09012 282 aaKnown RBP12.31□□□□□ -0.44
APP-201ENST00000346798 ZCCHC18P0CG32 403 aa12.31□□□□□ -0.44
APP-201ENST00000346798 CSH1P0DML2 217 aa12.31□□□□□ -0.44
APP-201ENST00000346798 CSH2P0DML3 217 aa12.31□□□□□ -0.44
APP-201ENST00000346798 OSBPP22059 807 aa12.31□□□□□ -0.44
APP-201ENST00000346798 EFNA5P52803 228 aa12.31□□□□□ -0.44
APP-201ENST00000346798 FAM160B1Q5W0V3 765 aa12.31□□□□□ -0.44
APP-201ENST00000346798 CDCA2Q69YH5 1023 aaPredicted RBP12.31□□□□□ -0.44
APP-201ENST00000346798 CMASQ8NFW8 434 aaPredicted RBP12.31□□□□□ -0.44
APP-201ENST00000346798 CPB2Q96IY4 423 aa12.31□□□□□ -0.44
APP-201ENST00000346798 NIFKQ9BYG3 293 aaKnown RBP12.31□□□□□ -0.44
APP-201ENST00000346798 CEP41Q9BYV8 373 aa12.31□□□□□ -0.44
APP-201ENST00000346798 SSU72Q9NP77 194 aaKnown RBP12.31□□□□□ -0.44
APP-201ENST00000346798 IL1RAPL1Q9NZN1 696 aa12.31□□□□□ -0.44
APP-201ENST00000346798 MAGED2Q9UNF1 606 aaPredicted RBP12.31□□□□□ -0.44
APP-201ENST00000346798 A6NHS1 94 aa12.31□□□□□ -0.44
APP-201ENST00000346798 LACTBL1A8MY62 500 aa12.31□□□□□ -0.44
APP-201ENST00000346798 MAFO75444 373 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms