RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 GSTCDQ8NEC7 633 aa9.7□□□□□ -0.86
ATG4A-202ENST00000345734 EXD1Q8NHP7 514 aa9.7□□□□□ -0.86
ATG4A-202ENST00000345734 PIWIL1Q96J94 861 aaKnown RBP9.7□□□□□ -0.86
ATG4A-202ENST00000345734 PPP1R10Q96QC0 940 aaKnown RBP9.7□□□□□ -0.86
ATG4A-202ENST00000345734 FAM129BQ96TA1 746 aa9.7□□□□□ -0.86
ATG4A-202ENST00000345734 FAM118BQ9BPY3 351 aa9.7□□□□□ -0.86
ATG4A-202ENST00000345734 CHST7Q9NS84 486 aa9.7□□□□□ -0.86
ATG4A-202ENST00000345734 MIOSQ9NXC5 875 aa9.7□□□□□ -0.86
ATG4A-202ENST00000345734 PTPN22Q9Y2R2 807 aa9.7□□□□□ -0.86
ATG4A-202ENST00000345734 SNX24Q9Y343 169 aa9.7□□□□□ -0.86
ATG4A-202ENST00000345734 GOLGA6BA6NDN3 693 aa9.69□□□□□ -0.86
ATG4A-202ENST00000345734 XPOTO43592 962 aaKnown RBP9.69□□□□□ -0.86
ATG4A-202ENST00000345734 MGEA5O60502 916 aa9.69□□□□□ -0.86
ATG4A-202ENST00000345734 PDGFAP04085 211 aa9.69□□□□□ -0.86
ATG4A-202ENST00000345734 GHRP10912 638 aa9.69□□□□□ -0.86
ATG4A-202ENST00000345734 KRT10P13645 584 aa9.69□□□□□ -0.86
ATG4A-202ENST00000345734 CCDC130P13994 396 aa9.69□□□□□ -0.86
ATG4A-202ENST00000345734 IBSPP21815 317 aaPredicted RBP9.69□□□□□ -0.86
ATG4A-202ENST00000345734 CST5P28325 142 aaPredicted RBP9.69□□□□□ -0.86
ATG4A-202ENST00000345734 GNL1P36915 607 aaPredicted RBP9.69□□□□□ -0.86
ATG4A-202ENST00000345734 TAF6P49848 677 aa9.69□□□□□ -0.86
ATG4A-202ENST00000345734 LILRA4P59901 499 aa9.69□□□□□ -0.86
ATG4A-202ENST00000345734 ADCY2Q08462 1091 aa9.69□□□□□ -0.86
ATG4A-202ENST00000345734 GPS2Q13227 327 aa9.69□□□□□ -0.86
ATG4A-202ENST00000345734 KLF1Q13351 362 aaPredicted RBP9.69□□□□□ -0.86
ATG4A-202ENST00000345734 PKDCCQ504Y2 493 aa9.69□□□□□ -0.86
ATG4A-202ENST00000345734 ZFYVE27Q5T4F4 411 aa9.69□□□□□ -0.86
ATG4A-202ENST00000345734 C6orf118Q5T5N4 469 aa9.69□□□□□ -0.86
ATG4A-202ENST00000345734 FAM102AQ5T9C2 384 aaPredicted RBP9.69□□□□□ -0.86
ATG4A-202ENST00000345734 MAP3K21Q5TCX8 1036 aa9.69□□□□□ -0.86
ATG4A-202ENST00000345734 MFSD7Q6UXD7 560 aa9.69□□□□□ -0.86
ATG4A-202ENST00000345734 FAM183BPQ6ZVS7 135 aa9.69□□□□□ -0.86
ATG4A-202ENST00000345734 CCDC105Q8IYK2 499 aa9.69□□□□□ -0.86
ATG4A-202ENST00000345734 RAPGEF5Q92565 580 aa9.69□□□□□ -0.86
ATG4A-202ENST00000345734 MCRS1Q96EZ8 462 aa9.69□□□□□ -0.86
ATG4A-202ENST00000345734 ZNF560Q96MR9 790 aa9.69□□□□□ -0.86
ATG4A-202ENST00000345734 GAD1Q99259 594 aa9.69□□□□□ -0.86
ATG4A-202ENST00000345734 OSBPL8Q9BZF1 889 aa9.69□□□□□ -0.86
ATG4A-202ENST00000345734 RAB17Q9H0T7 212 aa9.69□□□□□ -0.86
ATG4A-202ENST00000345734 ACBD3Q9H3P7 528 aa9.69□□□□□ -0.86
ATG4A-202ENST00000345734 LRRC19Q9H756 370 aa9.69□□□□□ -0.86
ATG4A-202ENST00000345734 FAM114A2Q9NRY5 505 aa9.69□□□□□ -0.86
ATG4A-202ENST00000345734 GDAP2Q9NXN4 497 aa9.69□□□□□ -0.86
ATG4A-202ENST00000345734 WDR35Q9P2L0 1181 aa9.69□□□□□ -0.86
ATG4A-202ENST00000345734 DDX20Q9UHI6 824 aaKnown RBP9.69□□□□□ -0.86
ATG4A-202ENST00000345734 GRAP2O75791 330 aa9.68□□□□□ -0.86
ATG4A-202ENST00000345734 KRT1P04264 644 aa9.68□□□□□ -0.86
ATG4A-202ENST00000345734 IL1R2P27930 398 aa9.68□□□□□ -0.86
ATG4A-202ENST00000345734 FNTAP49354 379 aa9.68□□□□□ -0.86
ATG4A-202ENST00000345734 CDR1P51861 262 aa9.68□□□□□ -0.86
ATG4A-202ENST00000345734 ITGA7Q13683 1181 aa9.68□□□□□ -0.86
ATG4A-202ENST00000345734 SV2CQ496J9 727 aa9.68□□□□□ -0.86
ATG4A-202ENST00000345734 KAZNQ674X7 775 aa9.68□□□□□ -0.86
ATG4A-202ENST00000345734 OR6B2Q6IFH4 312 aa9.68□□□□□ -0.86
ATG4A-202ENST00000345734 TRNP1Q6NT89 227 aa9.68□□□□□ -0.86
ATG4A-202ENST00000345734 UNC93AQ86WB7 457 aa9.68□□□□□ -0.86
ATG4A-202ENST00000345734 OSTM1Q86WC4 334 aa9.68□□□□□ -0.86
ATG4A-202ENST00000345734 EIF1ADQ8N9N8 165 aaKnown RBP9.68□□□□□ -0.86
ATG4A-202ENST00000345734 APPL2Q8NEU8 664 aa9.68□□□□□ -0.86
ATG4A-202ENST00000345734 RAET1EQ8TD07 263 aa9.68□□□□□ -0.86
ATG4A-202ENST00000345734 PIK3R5Q8WYR1 880 aa9.68□□□□□ -0.86
ATG4A-202ENST00000345734 SLITRK1Q96PX8 696 aa9.68□□□□□ -0.86
ATG4A-202ENST00000345734 TSPAN18Q96SJ8 248 aa9.68□□□□□ -0.86
ATG4A-202ENST00000345734 DCLK3Q9C098 648 aa9.68□□□□□ -0.86
ATG4A-202ENST00000345734 ZWILCHQ9H900 591 aa9.68□□□□□ -0.86
ATG4A-202ENST00000345734 PADI3Q9ULW8 664 aa9.68□□□□□ -0.86
ATG4A-202ENST00000345734 FAN1Q9Y2M0 1017 aa9.68□□□□□ -0.86
ATG4A-202ENST00000345734 TDRD15B5MCY1 1934 aaKnown RBP9.68□□□□□ -0.86
ATG4A-202ENST00000345734 LRCH4O75427 683 aa9.68□□□□□ -0.86
ATG4A-202ENST00000345734 ADORA2BP29275 332 aa9.68□□□□□ -0.86
ATG4A-202ENST00000345734 LRPAP1P30533 357 aa9.68□□□□□ -0.86
ATG4A-202ENST00000345734 HSPA9P38646 679 aaKnown RBP9.68□□□□□ -0.86
ATG4A-202ENST00000345734 PNPLA4P41247 253 aa9.68□□□□□ -0.86
ATG4A-202ENST00000345734 RPL21P46778 160 aaKnown RBP9.68□□□□□ -0.86
ATG4A-202ENST00000345734 ACLYP53396 1101 aa9.68□□□□□ -0.86
ATG4A-202ENST00000345734 SLC25A11Q02978 314 aaKnown RBP9.68□□□□□ -0.86
ATG4A-202ENST00000345734 LPIN1Q14693 890 aa9.68□□□□□ -0.86
ATG4A-202ENST00000345734 STILQ15468 1287 aa9.68□□□□□ -0.86
ATG4A-202ENST00000345734 TAF5Q15542 800 aa9.68□□□□□ -0.86
ATG4A-202ENST00000345734 CCDC142Q17RM4 750 aa9.68□□□□□ -0.86
ATG4A-202ENST00000345734 SMTNL2Q2TAL5 461 aa9.68□□□□□ -0.86
ATG4A-202ENST00000345734 RAB6CQ53S08 254 aa9.68□□□□□ -0.86
ATG4A-202ENST00000345734 LRRC38Q5VT99 294 aa9.68□□□□□ -0.86
ATG4A-202ENST00000345734 ARHGAP17Q68EM7 881 aa9.68□□□□□ -0.86
ATG4A-202ENST00000345734 ZDHHC24Q6UX98 284 aa9.68□□□□□ -0.86
ATG4A-202ENST00000345734 AGMOQ6ZNB7 445 aa9.68□□□□□ -0.86
ATG4A-202ENST00000345734 LIMS2Q7Z4I7 341 aa9.68□□□□□ -0.86
ATG4A-202ENST00000345734 RCOR2Q8IZ40 523 aa9.68□□□□□ -0.86
ATG4A-202ENST00000345734 ADGRF2Q8IZF7 708 aa9.68□□□□□ -0.86
ATG4A-202ENST00000345734 LINC00528Q8N1L1 170 aa9.68□□□□□ -0.86
ATG4A-202ENST00000345734 MREGQ8N565 214 aa9.68□□□□□ -0.86
ATG4A-202ENST00000345734 PCSK9Q8NBP7 692 aaKnown RBP9.68□□□□□ -0.86
ATG4A-202ENST00000345734 FNIP1Q8TF40 1166 aa9.68□□□□□ -0.86
ATG4A-202ENST00000345734 ZIM3Q96PE6 472 aa9.68□□□□□ -0.86
ATG4A-202ENST00000345734 RAB6CQ9H0N0 254 aa9.68□□□□□ -0.86
ATG4A-202ENST00000345734 SNX25Q9H3E2 840 aa9.68□□□□□ -0.86
ATG4A-202ENST00000345734 CHST12Q9NRB3 414 aa9.68□□□□□ -0.86
ATG4A-202ENST00000345734 GRHL1Q9NZI5 618 aa9.68□□□□□ -0.86
ATG4A-202ENST00000345734 LCMT1Q9UIC8 334 aa9.68□□□□□ -0.86
ATG4A-202ENST00000345734 RASAL2Q9UJF2 1139 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms