RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 PRKCIP41743 596 aa18.01■□□□□ 0.47
SPAST-202ENST00000345662 MGAT5Q09328 741 aa18.01■□□□□ 0.47
SPAST-202ENST00000345662 TTLL4Q14679 1199 aa18.01■□□□□ 0.47
SPAST-202ENST00000345662 GOLGA7BQ2TAP0 167 aa18.01■□□□□ 0.47
SPAST-202ENST00000345662 CCDC153Q494R4 210 aa18.01■□□□□ 0.47
SPAST-202ENST00000345662 DHDDSQ86SQ9 333 aa18.01■□□□□ 0.47
SPAST-202ENST00000345662 HIST1H2AHQ96KK5 128 aa18.01■□□□□ 0.47
SPAST-202ENST00000345662 NDNQ99608 321 aa18.01■□□□□ 0.47
SPAST-202ENST00000345662 HIST1H2AJQ99878 128 aa18.01■□□□□ 0.47
SPAST-202ENST00000345662 H2AFJQ9BTM1 129 aa18.01■□□□□ 0.47
SPAST-202ENST00000345662 TARS2Q9BW92 718 aaKnown RBP18.01■□□□□ 0.47
SPAST-202ENST00000345662 HMG20AQ9NP66 347 aa18.01■□□□□ 0.47
SPAST-202ENST00000345662 ACOT9Q9Y305 439 aa18.01■□□□□ 0.47
SPAST-202ENST00000345662 SPATA31A3Q5VYP0 1347 aa18.01■□□□□ 0.47
SPAST-202ENST00000345662 LINC00854A0A1B0GVQ3 168 aa18.01■□□□□ 0.47
SPAST-202ENST00000345662 BTNL10A8MVZ5 291 aa18.01■□□□□ 0.47
SPAST-202ENST00000345662 KBTBD13C9JR72 458 aa18.01■□□□□ 0.47
SPAST-202ENST00000345662 DCXO43602 365 aa18.01■□□□□ 0.47
SPAST-202ENST00000345662 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.01■□□□□ 0.47
SPAST-202ENST00000345662 DCAF6Q58WW2 860 aa18.01■□□□□ 0.47
SPAST-202ENST00000345662 CHST7Q9NS84 486 aa18.01■□□□□ 0.47
SPAST-202ENST00000345662 ECE2O60344 883 aa18■□□□□ 0.47
SPAST-202ENST00000345662 POU4F1Q01851 419 aa18■□□□□ 0.47
SPAST-202ENST00000345662 FAAP100Q0VG06 881 aa18■□□□□ 0.47
SPAST-202ENST00000345662 SFSWAPQ12872 951 aaKnown RBP18■□□□□ 0.47
SPAST-202ENST00000345662 TRAF2Q12933 501 aa18■□□□□ 0.47
SPAST-202ENST00000345662 TTC27Q6P3X3 843 aa18■□□□□ 0.47
SPAST-202ENST00000345662 EXOC3L1Q86VI1 746 aa18■□□□□ 0.47
SPAST-202ENST00000345662 VTI1BQ9UEU0 232 aa18■□□□□ 0.47
SPAST-202ENST00000345662 ANXA9O76027 345 aa18■□□□□ 0.47
SPAST-202ENST00000345662 LSM8O95777 96 aaKnown RBP18■□□□□ 0.47
SPAST-202ENST00000345662 LRRC74AQ0VAA2 488 aa18■□□□□ 0.47
SPAST-202ENST00000345662 OR8H2Q8N162 312 aa18■□□□□ 0.47
SPAST-202ENST00000345662 RNF148Q8N7C7 305 aa18■□□□□ 0.47
SPAST-202ENST00000345662 AFG1LQ8WV93 481 aa18■□□□□ 0.47
SPAST-202ENST00000345662 OSCP1Q8WVF1 389 aa18■□□□□ 0.47
SPAST-202ENST00000345662 PABPC5Q96DU9 382 aaKnown RBP18■□□□□ 0.47
SPAST-202ENST00000345662 OMA1Q96E52 524 aa18■□□□□ 0.47
SPAST-202ENST00000345662 MRPS26Q9BYN8 205 aaKnown RBP18■□□□□ 0.47
SPAST-202ENST00000345662 PLGRKTQ9HBL7 147 aa18■□□□□ 0.47
SPAST-202ENST00000345662 CROTQ9UKG9 612 aa18■□□□□ 0.47
SPAST-202ENST00000345662 PKP3Q9Y446 797 aa18■□□□□ 0.47
SPAST-202ENST00000345662 NEXMIFQ5QGS0 1516 aa18■□□□□ 0.47
SPAST-202ENST00000345662 SYNDIG1LA6NDD5 238 aa18■□□□□ 0.47
SPAST-202ENST00000345662 ZNF862O60290 1169 aa18■□□□□ 0.47
SPAST-202ENST00000345662 CYP2C8P10632 490 aa18■□□□□ 0.47
SPAST-202ENST00000345662 C1QBPQ07021 282 aaKnown RBP18■□□□□ 0.47
SPAST-202ENST00000345662 SPP2Q13103 211 aa18■□□□□ 0.47
SPAST-202ENST00000345662 DUPD1Q68J44 220 aa18■□□□□ 0.47
SPAST-202ENST00000345662 SNX32Q86XE0 403 aa18■□□□□ 0.47
SPAST-202ENST00000345662 PNMA5Q96PV4 448 aa18■□□□□ 0.47
SPAST-202ENST00000345662 C1orf50Q9BV19 199 aa18■□□□□ 0.47
SPAST-202ENST00000345662 UBE2OQ9C0C9 1292 aaKnown RBP18■□□□□ 0.47
SPAST-202ENST00000345662 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18■□□□□ 0.472e-6■■■■■ 28.7
SPAST-202ENST00000345662 LRFN2Q9ULH4 789 aa18■□□□□ 0.47
SPAST-202ENST00000345662 RECQLP46063 649 aaPredicted RBP18■□□□□ 0.47
SPAST-202ENST00000345662 MRPS22P82650 360 aaKnown RBP18■□□□□ 0.47
SPAST-202ENST00000345662 MAPK11Q15759 364 aa18■□□□□ 0.47
SPAST-202ENST00000345662 CWF19L1Q69YN2 538 aaKnown RBP18■□□□□ 0.47
SPAST-202ENST00000345662 DDX50Q9BQ39 737 aaKnown RBP18■□□□□ 0.47
SPAST-202ENST00000345662 BDH2Q9BUT1 245 aa18■□□□□ 0.47
SPAST-202ENST00000345662 TRIM13O60858 407 aa17.99■□□□□ 0.47
SPAST-202ENST00000345662 PSMB9P28065 219 aa17.99■□□□□ 0.47
SPAST-202ENST00000345662 NME5P56597 212 aa17.99■□□□□ 0.47
SPAST-202ENST00000345662 SH3TC2Q8TF17 1288 aa17.99■□□□□ 0.47
SPAST-202ENST00000345662 HES6Q96HZ4 224 aa17.99■□□□□ 0.47
SPAST-202ENST00000345662 CEP44Q9C0F1 390 aa17.99■□□□□ 0.47
SPAST-202ENST00000345662 CHST12Q9NRB3 414 aa17.99■□□□□ 0.47
SPAST-202ENST00000345662 IARS2Q9NSE4 1012 aaKnown RBP17.99■□□□□ 0.47
SPAST-202ENST00000345662 UBAP1Q9NZ09 502 aa17.99■□□□□ 0.47
SPAST-202ENST00000345662 USP18Q9UMW8 372 aa17.99■□□□□ 0.47
SPAST-202ENST00000345662 PTPRMP28827 1452 aa17.99■□□□□ 0.47
SPAST-202ENST00000345662 PDZK1P1A8MUH7 402 aa17.99■□□□□ 0.47
SPAST-202ENST00000345662 MPP3Q13368 585 aa17.99■□□□□ 0.47
SPAST-202ENST00000345662 RGS21Q2M5E4 152 aa17.99■□□□□ 0.47
SPAST-202ENST00000345662 CCDC80Q76M96 950 aa17.99■□□□□ 0.47
SPAST-202ENST00000345662 ERO1BQ86YB8 467 aa17.99■□□□□ 0.47
SPAST-202ENST00000345662 CCDC33Q8N5R6 958 aa17.99■□□□□ 0.47
SPAST-202ENST00000345662 REXO2Q9Y3B8 237 aaKnown RBP17.99■□□□□ 0.47
SPAST-202ENST00000345662 EFCAB14O75071 495 aa17.99■□□□□ 0.47
SPAST-202ENST00000345662 MFN2O95140 757 aa17.99■□□□□ 0.47
SPAST-202ENST00000345662 PDGFRBP09619 1106 aa17.99■□□□□ 0.47
SPAST-202ENST00000345662 MIIPQ5JXC2 388 aa17.99■□□□□ 0.47
SPAST-202ENST00000345662 CENPLQ8N0S6 344 aaPredicted RBP17.99■□□□□ 0.47
SPAST-202ENST00000345662 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.99■□□□□ 0.47
SPAST-202ENST00000345662 STKLD1Q8NE28 680 aa17.99■□□□□ 0.47
SPAST-202ENST00000345662 SLC7A14Q8TBB6 771 aa17.99■□□□□ 0.47
SPAST-202ENST00000345662 INPP4AQ96PE3 977 aaPredicted RBP17.99■□□□□ 0.47
SPAST-202ENST00000345662 MMTAG2Q9BU76 263 aaKnown RBP17.99■□□□□ 0.47
SPAST-202ENST00000345662 LATS2Q9NRM7 1088 aa17.99■□□□□ 0.47
SPAST-202ENST00000345662 NMRK1Q9NWW6 199 aa17.99■□□□□ 0.47
SPAST-202ENST00000345662 CCNHP51946 323 aaPredicted RBP17.99■□□□□ 0.47
SPAST-202ENST00000345662 ARMC4Q5T2S8 1044 aa17.99■□□□□ 0.47
SPAST-202ENST00000345662 TTC23LQ6PF05 361 aa17.99■□□□□ 0.47
SPAST-202ENST00000345662 ISLR2Q6UXK2 745 aa17.99■□□□□ 0.47
SPAST-202ENST00000345662 RIPOR1Q6ZS17 1223 aa17.99■□□□□ 0.47
SPAST-202ENST00000345662 DHRSXQ8N5I4 330 aa17.99■□□□□ 0.47
SPAST-202ENST00000345662 TSPAN14Q8NG11 270 aa17.99■□□□□ 0.47
SPAST-202ENST00000345662 C9orf16Q9BUW7 83 aa17.99■□□□□ 0.47
SPAST-202ENST00000345662 SESN1Q9Y6P5 492 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms