RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 CNPY3Q9BT09 278 aa13.4□□□□□ -0.26
CLK3-201ENST00000345005 CD248Q9HCU0 757 aa13.4□□□□□ -0.26
CLK3-201ENST00000345005 ZDHHC18Q9NUE0 388 aa13.4□□□□□ -0.26
CLK3-201ENST00000345005 DDX43Q9NXZ2 648 aaKnown RBP13.4□□□□□ -0.26
CLK3-201ENST00000345005 CACNG4Q9UBN1 327 aa13.4□□□□□ -0.26
CLK3-201ENST00000345005 INPP5FQ9Y2H2 1132 aa13.4□□□□□ -0.26
CLK3-201ENST00000345005 TSC2P49815 1807 aa13.4□□□□□ -0.26
CLK3-201ENST00000345005 C2CD4BA6NLJ0 364 aa13.39□□□□□ -0.27
CLK3-201ENST00000345005 PIK3R2O00459 728 aa13.39□□□□□ -0.27
CLK3-201ENST00000345005 RALAP11233 206 aa13.39□□□□□ -0.27
CLK3-201ENST00000345005 COL6A1P12109 1028 aa13.39□□□□□ -0.27
CLK3-201ENST00000345005 DESP17661 470 aa13.39□□□□□ -0.27
CLK3-201ENST00000345005 SCNN1AP37088 669 aa13.39□□□□□ -0.27
CLK3-201ENST00000345005 QPCTQ16769 361 aa13.39□□□□□ -0.27
CLK3-201ENST00000345005 MFSD5Q6N075 450 aa13.39□□□□□ -0.27
CLK3-201ENST00000345005 DCLRE1AQ6PJP8 1040 aa13.39□□□□□ -0.27
CLK3-201ENST00000345005 CCDC137Q6PK04 289 aaKnown RBP13.39□□□□□ -0.27
CLK3-201ENST00000345005 METTL23Q86XA0 190 aa13.39□□□□□ -0.27
CLK3-201ENST00000345005 EGFL6Q8IUX8 553 aa13.39□□□□□ -0.27
CLK3-201ENST00000345005 SCUBE3Q8IX30 993 aa13.39□□□□□ -0.27
CLK3-201ENST00000345005 FAM126BQ8IXS8 530 aa13.39□□□□□ -0.27
CLK3-201ENST00000345005 EMC1Q8N766 993 aa13.39□□□□□ -0.27
CLK3-201ENST00000345005 CCDC63Q8NA47 563 aa13.39□□□□□ -0.27
CLK3-201ENST00000345005 C3orf58Q8NDZ4 430 aa13.39□□□□□ -0.27
CLK3-201ENST00000345005 MIEF2Q96C03 454 aa13.39□□□□□ -0.27
CLK3-201ENST00000345005 RSRC1Q96IZ7 334 aaKnown RBP13.39□□□□□ -0.27
CLK3-201ENST00000345005 DEFB118Q96PH6 123 aa13.39□□□□□ -0.27
CLK3-201ENST00000345005 DUSP16Q9BY84 665 aa13.39□□□□□ -0.27
CLK3-201ENST00000345005 DSEQ9UL01 958 aa13.39□□□□□ -0.27
CLK3-201ENST00000345005 SLC12A4Q9UP95 1085 aa13.39□□□□□ -0.27
CLK3-201ENST00000345005 XPO1O14980 1071 aaKnown RBP13.39□□□□□ -0.27
CLK3-201ENST00000345005 ATP2C2O75185 946 aa13.39□□□□□ -0.27
CLK3-201ENST00000345005 LRCH4O75427 683 aa13.39□□□□□ -0.27
CLK3-201ENST00000345005 KRT1P04264 644 aa13.39□□□□□ -0.27
CLK3-201ENST00000345005 ODC1P11926 461 aa13.39□□□□□ -0.27
CLK3-201ENST00000345005 RARGP13631 454 aa13.39□□□□□ -0.27
CLK3-201ENST00000345005 TCF4P15884 667 aa13.39□□□□□ -0.27
CLK3-201ENST00000345005 PDGFRAP16234 1089 aa13.39□□□□□ -0.27
CLK3-201ENST00000345005 IGFBP6P24592 240 aaPredicted RBP13.39□□□□□ -0.27
CLK3-201ENST00000345005 PCSK1P29120 753 aa13.39□□□□□ -0.27
CLK3-201ENST00000345005 PTPN7P35236 360 aa13.39□□□□□ -0.27
CLK3-201ENST00000345005 PCK1P35558 622 aa13.39□□□□□ -0.27
CLK3-201ENST00000345005 PTGIRP43119 386 aa13.39□□□□□ -0.27
CLK3-201ENST00000345005 ATP13A4Q4VNC1 1196 aa13.39□□□□□ -0.27
CLK3-201ENST00000345005 TIGD5Q53EQ6 642 aa13.39□□□□□ -0.27
CLK3-201ENST00000345005 OLFML1Q6UWY5 402 aa13.39□□□□□ -0.27
CLK3-201ENST00000345005 TRMT10CQ7L0Y3 403 aaKnown RBP13.39□□□□□ -0.27
CLK3-201ENST00000345005 CCDC105Q8IYK2 499 aa13.39□□□□□ -0.27
CLK3-201ENST00000345005 URGCPQ8TCY9 931 aa13.39□□□□□ -0.27
CLK3-201ENST00000345005 RXFP2Q8WXD0 754 aa13.39□□□□□ -0.27
CLK3-201ENST00000345005 RNF25Q96BH1 459 aaPredicted RBP13.39□□□□□ -0.27
CLK3-201ENST00000345005 SLITRK1Q96PX8 696 aa13.39□□□□□ -0.27
CLK3-201ENST00000345005 PAAF1Q9BRP4 392 aa13.39□□□□□ -0.27
CLK3-201ENST00000345005 DPH5Q9H2P9 285 aa13.39□□□□□ -0.27
CLK3-201ENST00000345005 HAUS2Q9NVX0 235 aa13.39□□□□□ -0.27
CLK3-201ENST00000345005 KANSL3Q9P2N6 904 aa13.39□□□□□ -0.27
CLK3-201ENST00000345005 CDH9Q9ULB4 789 aa13.39□□□□□ -0.27
CLK3-201ENST00000345005 OGDHLQ9ULD0 1010 aa13.39□□□□□ -0.27
CLK3-201ENST00000345005 TPX2Q9ULW0 747 aaKnown RBP13.39□□□□□ -0.27
CLK3-201ENST00000345005 PITPNM1O00562 1244 aa13.38□□□□□ -0.27
CLK3-201ENST00000345005 PAPSS1O43252 624 aaPredicted RBP13.38□□□□□ -0.27
CLK3-201ENST00000345005 B3GAT3O94766 335 aa13.38□□□□□ -0.27
CLK3-201ENST00000345005 TJP3O95049 919 aa13.38□□□□□ -0.27
CLK3-201ENST00000345005 CCL5P13501 91 aa13.38□□□□□ -0.27
CLK3-201ENST00000345005 CHN1P15882 459 aa13.38□□□□□ -0.27
CLK3-201ENST00000345005 ACAT1P24752 427 aaKnown RBP13.38□□□□□ -0.27
CLK3-201ENST00000345005 FLT3P36888 993 aa13.38□□□□□ -0.27
CLK3-201ENST00000345005 PLCB3Q01970 1234 aa13.38□□□□□ -0.27
CLK3-201ENST00000345005 SLC25A11Q02978 314 aaKnown RBP13.38□□□□□ -0.27
CLK3-201ENST00000345005 KLF1Q13351 362 aaPredicted RBP13.38□□□□□ -0.27
CLK3-201ENST00000345005 SPOCD1Q6ZMY3 1216 aa13.38□□□□□ -0.27
CLK3-201ENST00000345005 ARCQ7LC44 396 aa13.38□□□□□ -0.27
CLK3-201ENST00000345005 CEP57Q86XR8 500 aa13.38□□□□□ -0.27
CLK3-201ENST00000345005 JAMLQ86YT9 394 aa13.38□□□□□ -0.27
CLK3-201ENST00000345005 ARFGAP1Q8N6T3 406 aa13.38□□□□□ -0.27
CLK3-201ENST00000345005 ANKRD27Q96NW4 1050 aa13.38□□□□□ -0.27
CLK3-201ENST00000345005 SYT15Q9BQS2 421 aa13.38□□□□□ -0.27
CLK3-201ENST00000345005 MED10Q9BTT4 135 aa13.38□□□□□ -0.27
CLK3-201ENST00000345005 HEMGNQ9BXL5 484 aa13.38□□□□□ -0.27
CLK3-201ENST00000345005 RNF208Q9H0X6 261 aa13.38□□□□□ -0.27
CLK3-201ENST00000345005 LRRD1A4D1F6 860 aa13.37□□□□□ -0.27
CLK3-201ENST00000345005 M0QZQ0 153 aa13.37□□□□□ -0.27
CLK3-201ENST00000345005 DPYSL4O14531 572 aa13.37□□□□□ -0.27
CLK3-201ENST00000345005 GABBR2O75899 941 aa13.37□□□□□ -0.27
CLK3-201ENST00000345005 CYP11A1P05108 521 aa13.37□□□□□ -0.27
CLK3-201ENST00000345005 NPR3P17342 541 aa13.37□□□□□ -0.27
CLK3-201ENST00000345005 MIPP30301 263 aa13.37□□□□□ -0.27
CLK3-201ENST00000345005 ELF3P78545 371 aaPredicted RBP13.37□□□□□ -0.27
CLK3-201ENST00000345005 LLGL1Q15334 1064 aa13.37□□□□□ -0.27
CLK3-201ENST00000345005 MTFR1Q15390 333 aa13.37□□□□□ -0.27
CLK3-201ENST00000345005 CCNG2Q16589 344 aa13.37□□□□□ -0.27
CLK3-201ENST00000345005 TFDP3Q5H9I0 405 aa13.37□□□□□ -0.27
CLK3-201ENST00000345005 MDH1BQ5I0G3 518 aa13.37□□□□□ -0.27
CLK3-201ENST00000345005 NOMO2Q5JPE7 1267 aa13.37□□□□□ -0.27
CLK3-201ENST00000345005 TTC27Q6P3X3 843 aa13.37□□□□□ -0.27
CLK3-201ENST00000345005 MFSD7Q6UXD7 560 aa13.37□□□□□ -0.27
CLK3-201ENST00000345005 CEP128Q6ZU80 1094 aa13.37□□□□□ -0.27
CLK3-201ENST00000345005 SYDE1Q6ZW31 735 aaPredicted RBP13.37□□□□□ -0.27
CLK3-201ENST00000345005 TRPM8Q7Z2W7 1104 aa13.37□□□□□ -0.27
CLK3-201ENST00000345005 GRK7Q8WTQ7 553 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms