RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 UBR7Q8N806 425 aa15.25■□□□□ 0.03
HMGN3-202ENST00000344726 MED15Q96RN5 788 aa15.25■□□□□ 0.03
HMGN3-202ENST00000344726 METTL14Q9HCE5 456 aaKnown RBP15.25■□□□□ 0.03
HMGN3-202ENST00000344726 EML5Q05BV3 1969 aa15.25■□□□□ 0.03
HMGN3-202ENST00000344726 BICDL2A1A5D9 508 aa15.24■□□□□ 0.03
HMGN3-202ENST00000344726 HRO43593 1189 aa15.24■□□□□ 0.03
HMGN3-202ENST00000344726 RNF40O75150 1001 aa15.24■□□□□ 0.03
HMGN3-202ENST00000344726 MBL2P11226 248 aaPredicted RBP15.24■□□□□ 0.03
HMGN3-202ENST00000344726 ANP32AP39687 249 aaKnown RBP15.24■□□□□ 0.03
HMGN3-202ENST00000344726 OPRD1P41143 372 aa15.24■□□□□ 0.03
HMGN3-202ENST00000344726 MESP2Q0VG99 397 aa15.24■□□□□ 0.03
HMGN3-202ENST00000344726 GRSF1Q12849 480 aaKnown RBP eCLIP15.24■□□□□ 0.03
HMGN3-202ENST00000344726 LRMPQ12912 555 aa15.24■□□□□ 0.03
HMGN3-202ENST00000344726 CUL2Q13617 745 aa15.24■□□□□ 0.03
HMGN3-202ENST00000344726 LPAL2Q16609 132 aa15.24■□□□□ 0.03
HMGN3-202ENST00000344726 HECTD3Q5T447 861 aa15.24■□□□□ 0.03
HMGN3-202ENST00000344726 HEATR6Q6AI08 1181 aaKnown RBP15.24■□□□□ 0.03
HMGN3-202ENST00000344726 LMO3Q8TAP4 145 aa15.24■□□□□ 0.03
HMGN3-202ENST00000344726 ATP2A3Q93084 1043 aa15.24■□□□□ 0.03
HMGN3-202ENST00000344726 WBP2Q969T9 261 aa15.24■□□□□ 0.03
HMGN3-202ENST00000344726 TMEM176AQ96HP8 235 aa15.24■□□□□ 0.03
HMGN3-202ENST00000344726 HEXIM2Q96MH2 286 aaKnown RBP15.24■□□□□ 0.03
HMGN3-202ENST00000344726 P2RY13Q9BPV8 354 aa15.24■□□□□ 0.03
HMGN3-202ENST00000344726 DUSP16Q9BY84 665 aa15.24■□□□□ 0.03
HMGN3-202ENST00000344726 OSER1Q9NX31 292 aa15.24■□□□□ 0.03
HMGN3-202ENST00000344726 SPAG17Q6Q759 2223 aa15.23■□□□□ 0.03
HMGN3-202ENST00000344726 SDK1Q7Z5N4 2213 aa15.23■□□□□ 0.03
HMGN3-202ENST00000344726 PMM2O15305 246 aa15.23■□□□□ 0.03
HMGN3-202ENST00000344726 CYP26A1O43174 497 aa15.23■□□□□ 0.03
HMGN3-202ENST00000344726 CYP17A1P05093 508 aa15.23■□□□□ 0.03
HMGN3-202ENST00000344726 TRIM21P19474 475 aaKnown RBP15.23■□□□□ 0.03
HMGN3-202ENST00000344726 ACO1P21399 889 aaKnown RBP15.23■□□□□ 0.03
HMGN3-202ENST00000344726 TGM1P22735 817 aa15.23■□□□□ 0.03
HMGN3-202ENST00000344726 PXNP49023 591 aaPredicted RBP15.23■□□□□ 0.03
HMGN3-202ENST00000344726 TUBP50607 506 aa15.23■□□□□ 0.03
HMGN3-202ENST00000344726 NRLP54845 237 aa15.23■□□□□ 0.03
HMGN3-202ENST00000344726 PPP2R5DQ14738 602 aa15.23■□□□□ 0.03
HMGN3-202ENST00000344726 TRIM59Q8IWR1 403 aa15.23■□□□□ 0.03
HMGN3-202ENST00000344726 TTC39CQ8N584 583 aa15.23■□□□□ 0.03
HMGN3-202ENST00000344726 TRIML1Q8N9V2 468 aa15.23■□□□□ 0.03
HMGN3-202ENST00000344726 CD101Q93033 1021 aa15.23■□□□□ 0.03
HMGN3-202ENST00000344726 HINFPQ9BQA5 517 aa15.23■□□□□ 0.03
HMGN3-202ENST00000344726 SRRTQ9BXP5 876 aaKnown RBP15.23■□□□□ 0.03
HMGN3-202ENST00000344726 FBXO44Q9H4M3 255 aa15.23■□□□□ 0.03
HMGN3-202ENST00000344726 NMUR1Q9HB89 426 aa15.23■□□□□ 0.03
HMGN3-202ENST00000344726 PNPLA8Q9NP80 782 aa15.23■□□□□ 0.03
HMGN3-202ENST00000344726 PARD6AQ9NPB6 346 aa15.23■□□□□ 0.03
HMGN3-202ENST00000344726 CFAP97Q9P2B7 532 aa15.23■□□□□ 0.03
HMGN3-202ENST00000344726 SCML2Q9UQR0 700 aa15.23■□□□□ 0.03
HMGN3-202ENST00000344726 CEP250Q9BV73 2442 aa15.23■□□□□ 0.03
HMGN3-202ENST00000344726 TBX18O95935 607 aa15.22■□□□□ 0.03
HMGN3-202ENST00000344726 CHRM1P11229 460 aaPredicted RBP15.22■□□□□ 0.03
HMGN3-202ENST00000344726 KIF11P52732 1056 aa15.22■□□□□ 0.03
HMGN3-202ENST00000344726 MARSP56192 900 aaKnown RBP15.22■□□□□ 0.03
HMGN3-202ENST00000344726 ARHGAP17Q68EM7 881 aa15.22■□□□□ 0.03
HMGN3-202ENST00000344726 LONP2Q86WA8 852 aa15.22■□□□□ 0.03
HMGN3-202ENST00000344726 C12orf40Q86WS4 652 aa15.22■□□□□ 0.03
HMGN3-202ENST00000344726 TTC30AQ86WT1 665 aa15.22■□□□□ 0.03
HMGN3-202ENST00000344726 SFTPA1Q8IWL2 248 aa15.22■□□□□ 0.03
HMGN3-202ENST00000344726 ADGRG2Q8IZP9 1017 aa15.22■□□□□ 0.03
HMGN3-202ENST00000344726 KAT5Q92993 513 aa15.22■□□□□ 0.03
HMGN3-202ENST00000344726 RMDN1Q96DB5 314 aa15.22■□□□□ 0.03
HMGN3-202ENST00000344726 PHF12Q96QT6 1004 aa15.22■□□□□ 0.03
HMGN3-202ENST00000344726 FAM124BQ9H5Z6 455 aaPredicted RBP15.22■□□□□ 0.03
HMGN3-202ENST00000344726 NCDNQ9UBB6 729 aa15.22■□□□□ 0.03
HMGN3-202ENST00000344726 A0A1W2PQH9 124 aa15.21■□□□□ 0.03
HMGN3-202ENST00000344726 TULP2O00295 520 aa15.21■□□□□ 0.03
HMGN3-202ENST00000344726 TLR5O60602 858 aa15.21■□□□□ 0.03
HMGN3-202ENST00000344726 NFATC1O95644 943 aa15.21■□□□□ 0.03
HMGN3-202ENST00000344726 DRD1P21728 446 aa15.21■□□□□ 0.03
HMGN3-202ENST00000344726 HOXA6P31267 233 aa15.21■□□□□ 0.03
HMGN3-202ENST00000344726 KCNH2Q12809 1159 aa15.21■□□□□ 0.03
HMGN3-202ENST00000344726 CLEC17AQ6ZS10 378 aa15.21■□□□□ 0.03
HMGN3-202ENST00000344726 SCD5Q86SK9 330 aa15.21■□□□□ 0.03
HMGN3-202ENST00000344726 KIAA1958Q8N8K9 716 aa15.21■□□□□ 0.03
HMGN3-202ENST00000344726 RPLP0P6Q8NHW5 317 aa15.21■□□□□ 0.03
HMGN3-202ENST00000344726 CLSTN2Q9H4D0 955 aa15.21■□□□□ 0.03
HMGN3-202ENST00000344726 CYLDQ9NQC7 956 aa15.21■□□□□ 0.03
HMGN3-202ENST00000344726 TLR8Q9NR97 1041 aaKnown RBP15.21■□□□□ 0.03
HMGN3-202ENST00000344726 USP3Q9Y6I4 520 aa15.21■□□□□ 0.03
HMGN3-202ENST00000344726 CACNA1AO00555 2505 aa15.2■□□□□ 0.02
HMGN3-202ENST00000344726 K7EQS6 105 aa15.2■□□□□ 0.02
HMGN3-202ENST00000344726 RNF225M0QZC1 329 aaPredicted RBP15.2■□□□□ 0.02
HMGN3-202ENST00000344726 MDM4O15151 490 aa15.2■□□□□ 0.02
HMGN3-202ENST00000344726 GREM1O60565 184 aa15.2■□□□□ 0.02
HMGN3-202ENST00000344726 TBXAS1P24557 533 aaPredicted RBP15.2■□□□□ 0.02
HMGN3-202ENST00000344726 ID4P47928 161 aa15.2■□□□□ 0.02
HMGN3-202ENST00000344726 SLC6A11P48066 632 aa15.2■□□□□ 0.02
HMGN3-202ENST00000344726 AMPD2Q01433 879 aa15.2■□□□□ 0.02
HMGN3-202ENST00000344726 DHCR24Q15392 516 aa15.2■□□□□ 0.02
HMGN3-202ENST00000344726 GOLGA7BQ2TAP0 167 aa15.2■□□□□ 0.02
HMGN3-202ENST00000344726 RHBDF2Q6PJF5 856 aa15.2■□□□□ 0.02
HMGN3-202ENST00000344726 PRR23BQ6ZRT6 265 aa15.2■□□□□ 0.02
HMGN3-202ENST00000344726 PIGZQ86VD9 579 aa15.2■□□□□ 0.02
HMGN3-202ENST00000344726 WDR5BQ86VZ2 330 aa15.2■□□□□ 0.02
HMGN3-202ENST00000344726 DDX42Q86XP3 938 aaKnown RBP eCLIP15.2■□□□□ 0.02
HMGN3-202ENST00000344726 ARHGEF19Q8IW93 802 aa15.2■□□□□ 0.02
HMGN3-202ENST00000344726 ANKRD52Q8NB46 1076 aa15.2■□□□□ 0.02
HMGN3-202ENST00000344726 NT5C1BQ96P26 610 aa15.2■□□□□ 0.02
HMGN3-202ENST00000344726 KLF16Q9BXK1 252 aaPredicted RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms