RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 DMAP1Q9NPF5 467 aaPredicted RBP13.15□□□□□ -0.3
SGCA-202ENST00000344627 FAM49BQ9NUQ9 324 aa13.15□□□□□ -0.3
SGCA-202ENST00000344627 CFAP97Q9P2B7 532 aa13.15□□□□□ -0.3
SGCA-202ENST00000344627 MMP17Q9ULZ9 603 aa13.15□□□□□ -0.3
SGCA-202ENST00000344627 NCOR2Q9Y618 2525 aa13.15□□□□□ -0.3
SGCA-202ENST00000344627 E2F8A0AVK6 867 aa13.14□□□□□ -0.31
SGCA-202ENST00000344627 MAPK13O15264 365 aa13.14□□□□□ -0.31
SGCA-202ENST00000344627 ASS1P00966 412 aaKnown RBP13.14□□□□□ -0.31
SGCA-202ENST00000344627 CD58P19256 250 aa13.14□□□□□ -0.31
SGCA-202ENST00000344627 ADORA2BP29275 332 aa13.14□□□□□ -0.31
SGCA-202ENST00000344627 PMLP29590 882 aa13.14□□□□□ -0.31
SGCA-202ENST00000344627 HOXC13P31276 330 aa13.14□□□□□ -0.31
SGCA-202ENST00000344627 TNFRSF4P43489 277 aa13.14□□□□□ -0.31
SGCA-202ENST00000344627 SLC5A3P53794 718 aa13.14□□□□□ -0.31
SGCA-202ENST00000344627 NUCB2P80303 420 aa13.14□□□□□ -0.31
SGCA-202ENST00000344627 NFIL3Q16649 462 aa13.14□□□□□ -0.31
SGCA-202ENST00000344627 EOGTQ5NDL2 527 aa13.14□□□□□ -0.31
SGCA-202ENST00000344627 C1orf220Q5T0J3 134 aa13.14□□□□□ -0.31
SGCA-202ENST00000344627 HECTD3Q5T447 861 aa13.14□□□□□ -0.31
SGCA-202ENST00000344627 SNX30Q5VWJ9 437 aa13.14□□□□□ -0.31
SGCA-202ENST00000344627 PAQR9Q6ZVX9 377 aa13.14□□□□□ -0.31
SGCA-202ENST00000344627 FUKQ8N0W3 1084 aa13.14□□□□□ -0.31
SGCA-202ENST00000344627 C12orf29Q8N999 325 aa13.14□□□□□ -0.31
SGCA-202ENST00000344627 SPACA7Q96KW9 195 aa13.14□□□□□ -0.31
SGCA-202ENST00000344627 HHIPQ96QV1 700 aa13.14□□□□□ -0.31
SGCA-202ENST00000344627 PNKPQ96T60 521 aa13.14□□□□□ -0.31
SGCA-202ENST00000344627 TSG101Q99816 390 aa13.14□□□□□ -0.31
SGCA-202ENST00000344627 POLMQ9NP87 494 aaPredicted RBP13.14□□□□□ -0.31
SGCA-202ENST00000344627 POLR3BQ9NW08 1133 aaPredicted RBP13.14□□□□□ -0.31
SGCA-202ENST00000344627 RMND1Q9NWS8 449 aa13.14□□□□□ -0.31
SGCA-202ENST00000344627 GMIPQ9P107 970 aa13.14□□□□□ -0.31
SGCA-202ENST00000344627 HMGXB4Q9UGU5 601 aa13.14□□□□□ -0.31
SGCA-202ENST00000344627 SPAG17Q6Q759 2223 aa13.13□□□□□ -0.31
SGCA-202ENST00000344627 KHNYNO15037 678 aaKnown RBP13.13□□□□□ -0.31
SGCA-202ENST00000344627 CETN3O15182 167 aa13.13□□□□□ -0.31
SGCA-202ENST00000344627 SMC2O95347 1197 aa13.13□□□□□ -0.31
SGCA-202ENST00000344627 OAS1P00973 400 aaKnown RBP13.13□□□□□ -0.31
SGCA-202ENST00000344627 APODP05090 189 aa13.13□□□□□ -0.31
SGCA-202ENST00000344627 FAM200BP0CF97 657 aa13.13□□□□□ -0.31
SGCA-202ENST00000344627 IRF1P10914 325 aa13.13□□□□□ -0.31
SGCA-202ENST00000344627 EPB41P11171 864 aaKnown RBP13.13□□□□□ -0.31
SGCA-202ENST00000344627 HOXD12P35452 270 aa13.13□□□□□ -0.31
SGCA-202ENST00000344627 ASPAP45381 313 aa13.13□□□□□ -0.31
SGCA-202ENST00000344627 SEC13P55735 322 aa13.13□□□□□ -0.31
SGCA-202ENST00000344627 ZXDBP98169 803 aa13.13□□□□□ -0.31
SGCA-202ENST00000344627 PPP3CAQ08209 521 aa13.13□□□□□ -0.31
SGCA-202ENST00000344627 LMAN2Q12907 356 aa13.13□□□□□ -0.31
SGCA-202ENST00000344627 SF3A2Q15428 464 aaKnown RBP13.13□□□□□ -0.31
SGCA-202ENST00000344627 CRY1Q16526 586 aa13.13□□□□□ -0.31
SGCA-202ENST00000344627 TCERG1LQ5VWI1 586 aa13.13□□□□□ -0.31
SGCA-202ENST00000344627 PMS2CLQ68D20 193 aa13.13□□□□□ -0.31
SGCA-202ENST00000344627 UNC93AQ86WB7 457 aa13.13□□□□□ -0.31
SGCA-202ENST00000344627 FMR1NBQ8N0W7 255 aaPredicted RBP13.13□□□□□ -0.31
SGCA-202ENST00000344627 TAS1R2Q8TE23 839 aa13.13□□□□□ -0.31
SGCA-202ENST00000344627 NT5C1AQ9BXI3 368 aa13.13□□□□□ -0.31
SGCA-202ENST00000344627 TMEM8AQ9HCN3 771 aa13.13□□□□□ -0.31
SGCA-202ENST00000344627 EVLQ9UI08 416 aaPredicted RBP13.13□□□□□ -0.31
SGCA-202ENST00000344627 HOOK1Q9UJC3 728 aaKnown RBP13.13□□□□□ -0.31
SGCA-202ENST00000344627 SH3BP1Q9Y3L3 701 aa13.13□□□□□ -0.31
SGCA-202ENST00000344627 K7EQS6 105 aa13.12□□□□□ -0.31
SGCA-202ENST00000344627 COCHO43405 550 aa13.12□□□□□ -0.31
SGCA-202ENST00000344627 BEST1O76090 585 aa13.12□□□□□ -0.31
SGCA-202ENST00000344627 KCNK5O95279 499 aa13.12□□□□□ -0.31
SGCA-202ENST00000344627 CSRP1P21291 193 aaKnown RBP13.12□□□□□ -0.31
SGCA-202ENST00000344627 GBP1P32455 592 aa13.12□□□□□ -0.31
SGCA-202ENST00000344627 OPRD1P41143 372 aa13.12□□□□□ -0.31
SGCA-202ENST00000344627 GRIA2P42262 883 aa13.12□□□□□ -0.31
SGCA-202ENST00000344627 CREB5Q02930 508 aa13.12□□□□□ -0.31
SGCA-202ENST00000344627 GAD2Q05329 585 aa13.12□□□□□ -0.31
SGCA-202ENST00000344627 E2F5Q15329 346 aa13.12□□□□□ -0.31
SGCA-202ENST00000344627 DHCR24Q15392 516 aa13.12□□□□□ -0.31
SGCA-202ENST00000344627 ZNF394Q53GI3 561 aa13.12□□□□□ -0.31
SGCA-202ENST00000344627 BTBD8Q5XKL5 378 aa13.12□□□□□ -0.31
SGCA-202ENST00000344627 RABEPKQ7Z6M1 372 aa13.12□□□□□ -0.31
SGCA-202ENST00000344627 TTC30AQ86WT1 665 aa13.12□□□□□ -0.31
SGCA-202ENST00000344627 CRYBG2Q8N1P7 616 aa13.12□□□□□ -0.31
SGCA-202ENST00000344627 WHAMMQ8TF30 809 aa13.12□□□□□ -0.31
SGCA-202ENST00000344627 ERCC4Q92889 916 aaPredicted RBP13.12□□□□□ -0.31
SGCA-202ENST00000344627 SMARCE1Q969G3 411 aa13.12□□□□□ -0.31
SGCA-202ENST00000344627 CYFIP2Q96F07 1278 aa13.12□□□□□ -0.31
SGCA-202ENST00000344627 SMOQ99835 787 aa13.12□□□□□ -0.31
SGCA-202ENST00000344627 EDEM2Q9BV94 578 aa13.12□□□□□ -0.31
SGCA-202ENST00000344627 NIF3L1Q9GZT8 377 aa13.12□□□□□ -0.31
SGCA-202ENST00000344627 FBXO44Q9H4M3 255 aa13.12□□□□□ -0.31
SGCA-202ENST00000344627 CCSER2Q9H7U1 834 aa13.12□□□□□ -0.31
SGCA-202ENST00000344627 CYP3A43Q9HB55 503 aa13.12□□□□□ -0.31
SGCA-202ENST00000344627 APOBEC3GQ9HC16 384 aaKnown RBP13.12□□□□□ -0.31
SGCA-202ENST00000344627 TLR8Q9NR97 1041 aaKnown RBP13.12□□□□□ -0.31
SGCA-202ENST00000344627 MYO16Q9Y6X6 1858 aa13.12□□□□□ -0.31
SGCA-202ENST00000344627 TNFRSF10BO14763 440 aa13.11□□□□□ -0.31
SGCA-202ENST00000344627 ZBTB24O43167 697 aaPredicted RBP13.11□□□□□ -0.31
SGCA-202ENST00000344627 STX10O60499 249 aa13.11□□□□□ -0.31
SGCA-202ENST00000344627 CYP17A1P05093 508 aa13.11□□□□□ -0.31
SGCA-202ENST00000344627 CEACAM1P13688 526 aa13.11□□□□□ -0.31
SGCA-202ENST00000344627 GTF2H1P32780 548 aa13.11□□□□□ -0.31
SGCA-202ENST00000344627 PRCPP42785 496 aa13.11□□□□□ -0.31
SGCA-202ENST00000344627 MXI1P50539 228 aa13.11□□□□□ -0.31
SGCA-202ENST00000344627 EDRF1Q3B7T1 1238 aa13.11□□□□□ -0.31
SGCA-202ENST00000344627 C2orf27AQ580R0 203 aa13.11□□□□□ -0.31
SGCA-202ENST00000344627 DCAF17Q5H9S7 520 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms