RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 YES1P07947 543 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 PRKACAP17612 351 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 ADCY8P40145 1251 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 BEND3Q5T5X7 828 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 SENP3Q9H4L4 574 aaPredicted RBP3.88□□□□□ -1.79
SYNE2-202ENST00000344113 SIX4Q9UIU6 781 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 NCAPD2Q15021 1401 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 GSTA4O15217 222 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 MAGEB2O15479 319 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 CDH11P55287 796 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 NPEPPSP55786 919 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 MRPS22P82650 360 aaKnown RBP3.88□□□□□ -1.79
SYNE2-202ENST00000344113 C1QBPQ07021 282 aaKnown RBP3.88□□□□□ -1.79
SYNE2-202ENST00000344113 HNF4GQ14541 408 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 C1orf94Q6P1W5 598 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 FAM171BQ6P995 826 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 GPIHBP1Q8IV16 184 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 DDX18Q9NVP1 670 aaKnown RBP3.88□□□□□ -1.79
SYNE2-202ENST00000344113 MED16Q9Y2X0 877 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 AFF2P51816 1311 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 PCF11O94913 1555 aaKnown RBP3.88□□□□□ -1.79
SYNE2-202ENST00000344113 K7ENM7 598 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 ZNF202O95125 648 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 DYNLL1P63167 89 aaKnown RBP3.88□□□□□ -1.79
SYNE2-202ENST00000344113 PMF1Q6P1K2 205 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 CCDC185Q8N715 623 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 NEO1Q92859 1461 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 AIFM3Q96NN9 605 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 HIPK3Q9H422 1215 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 RAVER2Q9HCJ3 691 aaKnown RBP3.88□□□□□ -1.79
SYNE2-202ENST00000344113 LEMD3Q9Y2U8 911 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 ZDHHC9Q9Y397 364 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 ZNF254O75437 659 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 PAHP00439 452 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 OPN1MWP04001 364 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 OPN1MW2P0DN77 364 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 OPN1MW3P0DN78 364 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 PRKCIP41743 596 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 ASIC1P78348 528 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 C4orf22Q6V702 233 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 KSR2Q6VAB6 950 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 LARGE2Q8N3Y3 721 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 FBXO30Q8TB52 745 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 PPP3R2Q96LZ3 170 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 DNAJC18Q9H819 358 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 MKS1Q9NXB0 559 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 A0A1B0GTH6 734 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 KLHL30Q0D2K2 578 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 CUL2Q13617 745 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 PPP1R3AQ16821 1122 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 UGT3A2Q3SY77 523 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 TAF1BQ53T94 588 aaPredicted RBP3.88□□□□□ -1.79
SYNE2-202ENST00000344113 SYDE2Q5VT97 1194 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 PCSK9Q8NBP7 692 aaKnown RBP3.88□□□□□ -1.79
SYNE2-202ENST00000344113 PGBD1Q96JS3 809 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 NUSAP1Q9BXS6 441 aaKnown RBP3.88□□□□□ -1.79
SYNE2-202ENST00000344113 UCK1Q9HA47 277 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 UPP2O95045 317 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 BMP1P13497 986 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 GALNTL6Q49A17 601 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 EARS2Q5JPH6 523 aaKnown RBP3.88□□□□□ -1.79
SYNE2-202ENST00000344113 SLC25A41Q8N5S1 370 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 KBTBD8Q8NFY9 601 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 IFT43Q96FT9 208 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 ZNF696Q9H7X3 374 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 SPASTQ9UBP0 616 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 RP1L1Q8IWN7 2480 aaPredicted RBP3.88□□□□□ -1.79
SYNE2-202ENST00000344113 AKAP8O43823 692 aaKnown RBP3.88□□□□□ -1.79
SYNE2-202ENST00000344113 VNN2O95498 520 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 PRDX6P30041 224 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 HNRNPH3P31942 346 aaKnown RBP3.88□□□□□ -1.79
SYNE2-202ENST00000344113 STAT3P40763 770 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 TBX2Q13207 712 aaPredicted RBP3.88□□□□□ -1.79
SYNE2-202ENST00000344113 RABGAP1LQ5R372 815 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 HES5Q5TA89 166 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 SMIM5Q71RC9 77 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 ZNF804AQ7Z570 1209 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 TTC6Q86TZ1 520 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 LRRC6Q86X45 466 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 TDRPQ86YL5 185 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 SRBD1Q8N5C6 995 aaKnown RBP3.88□□□□□ -1.79
SYNE2-202ENST00000344113 AIDAQ96BJ3 306 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 RAB20Q9NX57 234 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 ARPP21Q9UBL0 812 aaPredicted RBP3.88□□□□□ -1.79
SYNE2-202ENST00000344113 LMTK2Q8IWU2 1503 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 ERCC6Q03468 1493 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 ATP10DQ9P241 1426 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 ALBP02768 609 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 MYCLP1P12525 358 aaPredicted RBP3.88□□□□□ -1.79
SYNE2-202ENST00000344113 CFL1P23528 166 aaKnown RBP3.88□□□□□ -1.79
SYNE2-202ENST00000344113 BTN3A2P78410 334 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 CREB5Q02930 508 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 KRT24Q2M2I5 525 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 RSAD2Q8WXG1 361 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 CELF4Q9BZC1 486 aaKnown RBP3.88□□□□□ -1.79
SYNE2-202ENST00000344113 ZNF556Q9HAH1 456 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 CPSF3Q9UKF6 684 aaKnown RBP3.88□□□□□ -1.79
SYNE2-202ENST00000344113 DPPA5A6NC42 116 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 ARHGEF15O94989 841 aa3.88□□□□□ -1.79
SYNE2-202ENST00000344113 CD2BP2O95400 341 aaKnown RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms